RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Celsr1O35161 3034 aa5.59□□□□□ -1.51
Scn9a-201ENSMUST00000100063 Col12a1Q60847 3120 aa5.59□□□□□ -1.51
Scn9a-201ENSMUST00000100063 Ndufaf8A2AMZ4 74 aa5.59□□□□□ -1.52
Scn9a-201ENSMUST00000100063 Ranbp2Q9ERU9 3053 aaKnown RBP5.56□□□□□ -1.52
Scn9a-201ENSMUST00000100063 LrbaQ9ESE1 2856 aa5.56□□□□□ -1.52
Scn9a-201ENSMUST00000100063 Lama3Q61789 3330 aa5.55□□□□□ -1.52
Scn9a-201ENSMUST00000100063 Celsr2Q9R0M0 2920 aa5.51□□□□□ -1.53
Scn9a-201ENSMUST00000100063 BptfA2A654 3036 aaKnown RBP5.51□□□□□ -1.53
Scn9a-201ENSMUST00000100063 Usp34Q6ZQ93 3582 aa5.5□□□□□ -1.53
Scn9a-201ENSMUST00000100063 Cfap54Q8C6S9 3106 aa5.48□□□□□ -1.53
Scn9a-201ENSMUST00000100063 Gm9112A2AI92 75 aa5.46□□□□□ -1.54
Scn9a-201ENSMUST00000100063 Mki67E9PVX6 3177 aaKnown RBP5.45□□□□□ -1.54
Scn9a-201ENSMUST00000100063 AtmQ62388 3066 aa5.44□□□□□ -1.54
Scn9a-201ENSMUST00000100063 Dmxl2Q8BPN8 3032 aa5.44□□□□□ -1.54
Scn9a-201ENSMUST00000100063 AspmQ8CJ27 3122 aa5.43□□□□□ -1.54
Scn9a-201ENSMUST00000100063 B930094E09RikQ8C4T2 136 aa5.4□□□□□ -1.54
Scn9a-201ENSMUST00000100063 VwfQ8CIZ8 2813 aa5.4□□□□□ -1.55
Scn9a-201ENSMUST00000100063 Prm2P07978 107 aa5.39□□□□□ -1.55
Scn9a-201ENSMUST00000100063 Gm9918Q8BUR5 174 aa5.36□□□□□ -1.55
Scn9a-201ENSMUST00000100063 Tenm2Q9WTS5 2764 aa5.36□□□□□ -1.55
Scn9a-201ENSMUST00000100063 4933428G20RikQ9D3X4 101 aa5.36□□□□□ -1.55
Scn9a-201ENSMUST00000100063 Vps13aQ5H8C4 3166 aa5.36□□□□□ -1.55
Scn9a-201ENSMUST00000100063 Gm17416Q30KP4 66 aa5.28□□□□□ -1.56
Scn9a-201ENSMUST00000100063 Adgrg4B7ZCC9 3073 aa5.28□□□□□ -1.56
Scn9a-201ENSMUST00000100063 Gm20537G3UYK7 97 aa5.27□□□□□ -1.57
Scn9a-201ENSMUST00000100063 Lama1P19137 3084 aa5.24□□□□□ -1.57
Scn9a-201ENSMUST00000100063 Unc80Q8BLN6 3261 aa5.22□□□□□ -1.57
Scn9a-201ENSMUST00000100063 Myo15aQ9QZZ4 3511 aa5.22□□□□□ -1.57
Scn9a-201ENSMUST00000100063 Frem2Q6NVD0 3160 aa5.2□□□□□ -1.58
Scn9a-201ENSMUST00000100063 Gm9736A0A1W2P7N1 277 aa5.18□□□□□ -1.58
Scn9a-201ENSMUST00000100063 Gm17402F6Z0L5 76 aa5.17□□□□□ -1.58
Scn9a-201ENSMUST00000100063 Lrrc37aB1AWG4 3215 aa5.16□□□□□ -1.58
Scn9a-201ENSMUST00000100063 2210017I01RikA0A0A6YVV1 95 aa5.15□□□□□ -1.58
Scn9a-201ENSMUST00000100063 Cdh23Q99PF4 3354 aa5.13□□□□□ -1.59
Scn9a-201ENSMUST00000100063 Zfhx3Q61329 3726 aa5.12□□□□□ -1.59
Scn9a-201ENSMUST00000100063 Dchs2A0A0A6YW72 3346 aa5.11□□□□□ -1.59
Scn9a-201ENSMUST00000100063 Helz2E9QAM5 2947 aaKnown RBP5.1□□□□□ -1.59
Scn9a-201ENSMUST00000100063 Gm19668J3QMD1 248 aa5.08□□□□□ -1.6
Scn9a-201ENSMUST00000100063 2310079G19RikQ9D6L6 185 aa5.06□□□□□ -1.6
Scn9a-201ENSMUST00000100063 Szt2A2A9C3 3431 aa5.06□□□□□ -1.6
Scn9a-201ENSMUST00000100063 SmcpP15265 143 aa5.04□□□□□ -1.6
Scn9a-201ENSMUST00000100063 Col7a1Q63870 2944 aa5.04□□□□□ -1.6
Scn9a-201ENSMUST00000100063 OtogO55225 2910 aa5.02□□□□□ -1.61
Scn9a-201ENSMUST00000100063 Celsr3Q91ZI0 3301 aa5□□□□□ -1.61
Scn9a-201ENSMUST00000100063 Gm10318A0A1W2P728 225 aa4.99□□□□□ -1.61
Scn9a-201ENSMUST00000100063 Crct1Q6PAI5 102 aa4.95□□□□□ -1.62
Scn9a-201ENSMUST00000100063 Sprr2kO70562 68 aa4.88□□□□□ -1.63
Scn9a-201ENSMUST00000100063 Col6a3E9PWQ3 3284 aa4.86□□□□□ -1.63
Scn9a-201ENSMUST00000100063 Gm6358A0A087WPH4 74 aa4.86□□□□□ -1.63
Scn9a-201ENSMUST00000100063 Krtap19-5O08632 62 aa4.85□□□□□ -1.63
Scn9a-201ENSMUST00000100063 Krtap13-1Q8K198 168 aa4.84□□□□□ -1.63
Scn9a-201ENSMUST00000100063 SpegQ62407 3262 aa4.82□□□□□ -1.64
Scn9a-201ENSMUST00000100063 DmdP11531 3678 aa4.82□□□□□ -1.64
Scn9a-201ENSMUST00000100063 Brca2P97929 3329 aa4.81□□□□□ -1.64
Scn9a-201ENSMUST00000100063 Akap9Q70FJ1 3797 aa4.79□□□□□ -1.64
Scn9a-201ENSMUST00000100063 Ank2Q8C8R3 3898 aa4.78□□□□□ -1.64
Scn9a-201ENSMUST00000100063 Krtap8-1O08633 61 aa4.74□□□□□ -1.65
Scn9a-201ENSMUST00000100063 Vps13cQ8BX70 3748 aa4.73□□□□□ -1.65
Scn9a-201ENSMUST00000100063 Muc5acE9QAQ8 3455 aa4.73□□□□□ -1.65
Scn9a-201ENSMUST00000100063 Muc6Q80T03 2850 aa4.73□□□□□ -1.65
Scn9a-201ENSMUST00000100063 Sprr2gO70558 76 aa4.7□□□□□ -1.66
Scn9a-201ENSMUST00000100063 Gm11939A2A592 99 aa4.69□□□□□ -1.66
Scn9a-201ENSMUST00000100063 Dchs1E9PVD3 3291 aa4.67□□□□□ -1.66
Scn9a-201ENSMUST00000100063 Fbn1Q61554 2873 aaKnown RBP4.66□□□□□ -1.66
Scn9a-201ENSMUST00000100063 VcanQ62059 3357 aa4.63□□□□□ -1.67
Scn9a-201ENSMUST00000100063 Gm18596A0A1W2P860 280 aa4.59□□□□□ -1.67
Scn9a-201ENSMUST00000100063 Krtap3-1A2A591 98 aa4.55□□□□□ -1.68
Scn9a-201ENSMUST00000100063 SpenQ62504 3644 aaKnown RBP4.55□□□□□ -1.68
Scn9a-201ENSMUST00000100063 Krtap19-9aF8WH65 55 aa4.54□□□□□ -1.68
Scn9a-201ENSMUST00000100063 Muc4Q8JZM8 3443 aa4.53□□□□□ -1.68
Scn9a-201ENSMUST00000100063 Krtap7-1Q9D3I6 87 aa4.51□□□□□ -1.69
Scn9a-201ENSMUST00000100063 Smg1Q8BKX6 3658 aaKnown RBP4.49□□□□□ -1.69
Scn9a-201ENSMUST00000100063 RelnQ60841 3461 aa4.49□□□□□ -1.69
Scn9a-201ENSMUST00000100063 Wdfy3Q6VNB8 3508 aa4.47□□□□□ -1.69
Scn9a-201ENSMUST00000100063 Gm19402J3QJV4 266 aa4.43□□□□□ -1.7
Scn9a-201ENSMUST00000100063 Lama5Q61001 3718 aa4.41□□□□□ -1.7
Scn9a-201ENSMUST00000100063 LorP18165 486 aa4.4□□□□□ -1.7
Scn9a-201ENSMUST00000100063 Krtap1-5A2A590 122 aa4.39□□□□□ -1.71
Scn9a-201ENSMUST00000100063 BsnO88737 3942 aa4.39□□□□□ -1.71
Scn9a-201ENSMUST00000100063 Cmya5Q70KF4 3739 aa4.38□□□□□ -1.71
Scn9a-201ENSMUST00000100063 Krtap19-9bQ99NG9 58 aa4.37□□□□□ -1.71
Scn9a-201ENSMUST00000100063 Krtap3-2Q9D638 99 aa4.33□□□□□ -1.72
Scn9a-201ENSMUST00000100063 Krtap3-3Q9D7P0 99 aa4.33□□□□□ -1.72
Scn9a-201ENSMUST00000100063 Krtap1-4Q3V2D6 188 aa4.3□□□□□ -1.72
Scn9a-201ENSMUST00000100063 2310046K23RikA0A0A6YVW6 87 aa4.29□□□□□ -1.72
Scn9a-201ENSMUST00000100063 Sprr2a3Q4KL71 83 aa4.28□□□□□ -1.72
Scn9a-201ENSMUST00000100063 Sprr2a1Q9CQK8 83 aa4.28□□□□□ -1.72
Scn9a-201ENSMUST00000100063 Lce3bQ9CQM7 98 aa4.24□□□□□ -1.73
Scn9a-201ENSMUST00000100063 Zfhx4Q9JJN2 3550 aa4.24□□□□□ -1.73
Scn9a-201ENSMUST00000100063 Csmd2V9GX34 3611 aa4.22□□□□□ -1.73
Scn9a-201ENSMUST00000100063 Krtap12-1Q9Z287 130 aa4.21□□□□□ -1.74
Scn9a-201ENSMUST00000100063 Csmd1Q923L3 3564 aa4.19□□□□□ -1.74
Scn9a-201ENSMUST00000100063 Huwe1Q7TMY8 4377 aaKnown RBP4.18□□□□□ -1.74
Scn9a-201ENSMUST00000100063 LystP97412 3788 aa4.13□□□□□ -1.75
Scn9a-201ENSMUST00000100063 Lce3cQ91V05 98 aa4.12□□□□□ -1.75
Scn9a-201ENSMUST00000100063 Lce1mQ9CR91 182 aa4.11□□□□□ -1.75
Scn9a-201ENSMUST00000100063 Sprr2fO70557 76 aa4.05□□□□□ -1.76
Scn9a-201ENSMUST00000100063 Sprr2iO70560 76 aa4.04□□□□□ -1.76
Scn9a-201ENSMUST00000100063 Gm884A2A9H6 3643 aa4.04□□□□□ -1.76
Scn9a-201ENSMUST00000100063 Lce3dE9Q8V1 98 aa3.99□□□□□ -1.77
Retrieved 100 of 22,080 RNA–protein pairs in 102.3 ms