RNA–Protein interactions for RNA: ENSMUST00000090806.4

Rai1-202, Transcript of Retinoic acid-induced protein 1, mousemouse

TSL 1 (best) BASIC

Gene Rai1, Length 7,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1-202ENSMUST00000090806 Fbn2Q61555 2907 aa6.65□□□□□ -1.35
Rai1-202ENSMUST00000090806 Utp20Q5XG71 2788 aaKnown RBP6.6□□□□□ -1.35
Rai1-202ENSMUST00000090806 Gm17402F6Z0L5 76 aa6.6□□□□□ -1.35
Rai1-202ENSMUST00000090806 Lama1P19137 3084 aa6.59□□□□□ -1.35
Rai1-202ENSMUST00000090806 Dchs2A0A0A6YW72 3346 aa6.59□□□□□ -1.35
Rai1-202ENSMUST00000090806 Lrrc37aB1AWG4 3215 aa6.58□□□□□ -1.36
Rai1-202ENSMUST00000090806 Pkd1l1Q8R526 2615 aa6.58□□□□□ -1.36
Rai1-202ENSMUST00000090806 Gm17416Q30KP4 66 aa6.58□□□□□ -1.36
Rai1-202ENSMUST00000090806 Tex15F8VPN2 2785 aa6.58□□□□□ -1.36
Rai1-202ENSMUST00000090806 Vps13cQ8BX70 3748 aa6.57□□□□□ -1.36
Rai1-202ENSMUST00000090806 AspmQ8CJ27 3122 aa6.57□□□□□ -1.36
Rai1-202ENSMUST00000090806 VcanQ62059 3357 aa6.56□□□□□ -1.36
Rai1-202ENSMUST00000090806 Col6a5A6H584 2640 aa6.56□□□□□ -1.36
Rai1-202ENSMUST00000090806 FcgbpE9Q0B5 2583 aa6.55□□□□□ -1.36
Rai1-202ENSMUST00000090806 Itpr1P11881 2749 aa6.55□□□□□ -1.36
Rai1-202ENSMUST00000090806 Dchs1E9PVD3 3291 aa6.5□□□□□ -1.37
Rai1-202ENSMUST00000090806 Celsr1O35161 3034 aa6.5□□□□□ -1.37
Rai1-202ENSMUST00000090806 KalrnA2CG49 2964 aa6.49□□□□□ -1.37
Rai1-202ENSMUST00000090806 SpegQ62407 3262 aa6.49□□□□□ -1.37
Rai1-202ENSMUST00000090806 DspE9Q557 2883 aaKnown RBP6.48□□□□□ -1.37
Rai1-202ENSMUST00000090806 2210017I01RikA0A0A6YVV1 95 aa6.47□□□□□ -1.37
Rai1-202ENSMUST00000090806 Wdfy4E9Q2M9 3149 aa6.45□□□□□ -1.38
Rai1-202ENSMUST00000090806 4933428G20RikQ9D3X4 101 aa6.44□□□□□ -1.38
Rai1-202ENSMUST00000090806 Csmd1Q923L3 3564 aa6.41□□□□□ -1.38
Rai1-202ENSMUST00000090806 Muc2Q80Z19 2680 aa6.41□□□□□ -1.38
Rai1-202ENSMUST00000090806 DmdP11531 3678 aa6.41□□□□□ -1.38
Rai1-202ENSMUST00000090806 Adgrg4B7ZCC9 3073 aa6.4□□□□□ -1.39
Rai1-202ENSMUST00000090806 Akap9Q70FJ1 3797 aa6.37□□□□□ -1.39
Rai1-202ENSMUST00000090806 FryE9Q8I9 3020 aa6.36□□□□□ -1.39
Rai1-202ENSMUST00000090806 Gm9918Q8BUR5 174 aa6.36□□□□□ -1.39
Rai1-202ENSMUST00000090806 Myo15bI7HPW8 3033 aa6.35□□□□□ -1.39
Rai1-202ENSMUST00000090806 Gm19668J3QMD1 248 aa6.34□□□□□ -1.39
Rai1-202ENSMUST00000090806 Igfn1Q3KNY0 2849 aa6.3□□□□□ -1.4
Rai1-202ENSMUST00000090806 Gm9736A0A1W2P7N1 277 aa6.3□□□□□ -1.4
Rai1-202ENSMUST00000090806 Hivep1Q03172 2688 aa6.29□□□□□ -1.4
Rai1-202ENSMUST00000090806 Zzef1Q5SSH7 2924 aa6.29□□□□□ -1.4
Rai1-202ENSMUST00000090806 RelnQ60841 3461 aa6.29□□□□□ -1.4
Rai1-202ENSMUST00000090806 Dmxl2Q8BPN8 3032 aa6.25□□□□□ -1.41
Rai1-202ENSMUST00000090806 Pdzd2E9Q1M1 2796 aa6.25□□□□□ -1.41
Rai1-202ENSMUST00000090806 LrbaQ9ESE1 2856 aa6.24□□□□□ -1.41
Rai1-202ENSMUST00000090806 Gm884A2A9H6 3643 aa6.22□□□□□ -1.41
Rai1-202ENSMUST00000090806 FlncQ8VHX6 2726 aaKnown RBP6.2□□□□□ -1.42
Rai1-202ENSMUST00000090806 SpenQ62504 3644 aaKnown RBP6.2□□□□□ -1.42
Rai1-202ENSMUST00000090806 NbeaQ9EPN1 2936 aa6.18□□□□□ -1.42
Rai1-202ENSMUST00000090806 Smg1Q8BKX6 3658 aaKnown RBP6.16□□□□□ -1.42
Rai1-202ENSMUST00000090806 Zfhx4Q9JJN2 3550 aa6.14□□□□□ -1.43
Rai1-202ENSMUST00000090806 Tenm4Q3UHK6 2771 aa6.11□□□□□ -1.43
Rai1-202ENSMUST00000090806 Celsr2Q9R0M0 2920 aa6.1□□□□□ -1.43
Rai1-202ENSMUST00000090806 Tenm1Q9WTS4 2731 aa6.1□□□□□ -1.43
Rai1-202ENSMUST00000090806 Chd9Q8BYH8 2885 aa6.08□□□□□ -1.44
Rai1-202ENSMUST00000090806 Trank1Q8BV79 2999 aa6.08□□□□□ -1.44
Rai1-202ENSMUST00000090806 Lama5Q61001 3718 aa6.07□□□□□ -1.44
Rai1-202ENSMUST00000090806 Krtap13-1Q8K198 168 aa6.06□□□□□ -1.44
Rai1-202ENSMUST00000090806 Gm11939A2A592 99 aa6.04□□□□□ -1.44
Rai1-202ENSMUST00000090806 Cmya5Q70KF4 3739 aa6.04□□□□□ -1.44
Rai1-202ENSMUST00000090806 Gm10318A0A1W2P728 225 aa6.01□□□□□ -1.45
Rai1-202ENSMUST00000090806 Nf1Q04690 2841 aa5.99□□□□□ -1.45
Rai1-202ENSMUST00000090806 Krtap3-1A2A591 98 aa5.96□□□□□ -1.46
Rai1-202ENSMUST00000090806 Muc5acE9QAQ8 3455 aa5.93□□□□□ -1.46
Rai1-202ENSMUST00000090806 Tenm3Q9WTS6 2715 aa5.91□□□□□ -1.46
Rai1-202ENSMUST00000090806 Tenm2Q9WTS5 2764 aa5.89□□□□□ -1.47
Rai1-202ENSMUST00000090806 Megf8P60882 2789 aa5.88□□□□□ -1.47
Rai1-202ENSMUST00000090806 Krtap19-5O08632 62 aa5.86□□□□□ -1.47
Rai1-202ENSMUST00000090806 Crct1Q6PAI5 102 aa5.85□□□□□ -1.47
Rai1-202ENSMUST00000090806 Krtap3-2Q9D638 99 aa5.85□□□□□ -1.47
Rai1-202ENSMUST00000090806 Krtap3-3Q9D7P0 99 aa5.85□□□□□ -1.47
Rai1-202ENSMUST00000090806 Svep1A2AVA0 3567 aa5.81□□□□□ -1.48
Rai1-202ENSMUST00000090806 Csmd2V9GX34 3611 aa5.76□□□□□ -1.49
Rai1-202ENSMUST00000090806 Helz2E9QAM5 2947 aaKnown RBP5.74□□□□□ -1.49
Rai1-202ENSMUST00000090806 Gm6358A0A087WPH4 74 aa5.73□□□□□ -1.49
Rai1-202ENSMUST00000090806 Ank2Q8C8R3 3898 aa5.7□□□□□ -1.5
Rai1-202ENSMUST00000090806 OtogO55225 2910 aa5.68□□□□□ -1.5
Rai1-202ENSMUST00000090806 Sprr2a3Q4KL71 83 aa5.58□□□□□ -1.52
Rai1-202ENSMUST00000090806 Sprr2a1Q9CQK8 83 aa5.58□□□□□ -1.52
Rai1-202ENSMUST00000090806 Krtap7-1Q9D3I6 87 aa5.57□□□□□ -1.52
Rai1-202ENSMUST00000090806 VwfQ8CIZ8 2813 aa5.57□□□□□ -1.52
Rai1-202ENSMUST00000090806 Krtap19-9aF8WH65 55 aa5.53□□□□□ -1.52
Rai1-202ENSMUST00000090806 Krtap1-5A2A590 122 aa5.53□□□□□ -1.52
Rai1-202ENSMUST00000090806 Krtap8-1O08633 61 aa5.48□□□□□ -1.53
Rai1-202ENSMUST00000090806 LystP97412 3788 aa5.47□□□□□ -1.53
Rai1-202ENSMUST00000090806 BsnO88737 3942 aa5.46□□□□□ -1.53
Rai1-202ENSMUST00000090806 Muc4Q8JZM8 3443 aa5.46□□□□□ -1.54
Rai1-202ENSMUST00000090806 Krtap19-9bQ99NG9 58 aa5.43□□□□□ -1.54
Rai1-202ENSMUST00000090806 Gm18596A0A1W2P860 280 aa5.35□□□□□ -1.55
Rai1-202ENSMUST00000090806 Krtap1-4Q3V2D6 188 aa5.35□□□□□ -1.55
Rai1-202ENSMUST00000090806 Fbn1Q61554 2873 aaKnown RBP5.34□□□□□ -1.55
Rai1-202ENSMUST00000090806 Huwe1Q7TMY8 4377 aaKnown RBP5.34□□□□□ -1.55
Rai1-202ENSMUST00000090806 Hspg2Q05793 3707 aaKnown RBP5.31□□□□□ -1.56
Rai1-202ENSMUST00000090806 Sprr2kO70562 68 aa5.31□□□□□ -1.56
Rai1-202ENSMUST00000090806 CubnQ9JLB4 3623 aa5.31□□□□□ -1.56
Rai1-202ENSMUST00000090806 Krtap12-1Q9Z287 130 aa5.3□□□□□ -1.56
Rai1-202ENSMUST00000090806 Xirp2Q4U4S6 3784 aa5.26□□□□□ -1.57
Rai1-202ENSMUST00000090806 Gm19402J3QJV4 266 aa5.21□□□□□ -1.58
Rai1-202ENSMUST00000090806 Dnah14A0A140LIJ4 4489 aa5.2□□□□□ -1.58
Rai1-202ENSMUST00000090806 Csmd3Q80T79 3707 aa5.2□□□□□ -1.58
Rai1-202ENSMUST00000090806 Muc6Q80T03 2850 aa5.15□□□□□ -1.58
Rai1-202ENSMUST00000090806 LorP18165 486 aa5.13□□□□□ -1.59
Rai1-202ENSMUST00000090806 Col7a1Q63870 2944 aa5.12□□□□□ -1.59
Rai1-202ENSMUST00000090806 Dnah10D3YYQ8 4591 aa5.09□□□□□ -1.59
Rai1-202ENSMUST00000090806 Sprr2gO70558 76 aa5.06□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms