RNA–Protein interactions for RNA: ENSMUST00000088973.10

Smarca1-202, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-202ENSMUST00000088973 VcanQ62059 3357 aa5.86□□□□□ -1.47
Smarca1-202ENSMUST00000088973 2310061N02RikQ9D6S9 174 aa5.86□□□□□ -1.47
Smarca1-202ENSMUST00000088973 Krtap14O08640 167 aa5.84□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Rpl37Q9D823 97 aa5.83□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Sec61bQ9CQS8 96 aaKnown RBP5.82□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Tenm3Q9WTS6 2715 aa5.81□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Camk2n1Q6QWF9 78 aa5.81□□□□□ -1.48
Smarca1-202ENSMUST00000088973 SpegQ62407 3262 aa5.81□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Dchs1E9PVD3 3291 aa5.8□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Tenm1Q9WTS4 2731 aa5.78□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Krtap10-10A0A1W2P7T6 217 aa5.78□□□□□ -1.48
Smarca1-202ENSMUST00000088973 Gm2310J3QNJ2 377 aa5.77□□□□□ -1.49
Smarca1-202ENSMUST00000088973 4933415A04RikQ9D443 101 aa5.77□□□□□ -1.49
Smarca1-202ENSMUST00000088973 SmcpP15265 143 aa5.76□□□□□ -1.49
Smarca1-202ENSMUST00000088973 BC029722A0A0N4SW31 51 aa5.76□□□□□ -1.49
Smarca1-202ENSMUST00000088973 Romo1P60603 79 aa5.74□□□□□ -1.49
Smarca1-202ENSMUST00000088973 1700042G07RikB1AUF7 90 aa5.73□□□□□ -1.49
Smarca1-202ENSMUST00000088973 Gm10382Q3V0T5 144 aa5.71□□□□□ -1.49
Smarca1-202ENSMUST00000088973 Gm19426M0QWC7 77 aa5.71□□□□□ -1.5
Smarca1-202ENSMUST00000088973 Tnp2P11378 117 aa5.7□□□□□ -1.5
Smarca1-202ENSMUST00000088973 Myo15aQ9QZZ4 3511 aa5.69□□□□□ -1.5
Smarca1-202ENSMUST00000088973 Cox6b2Q80ZN9 88 aa5.64□□□□□ -1.51
Smarca1-202ENSMUST00000088973 Gm2696A0A1W2P709 240 aa5.62□□□□□ -1.51
Smarca1-202ENSMUST00000088973 Rps29P62274 56 aa5.62□□□□□ -1.51
Smarca1-202ENSMUST00000088973 Wdfy3Q6VNB8 3508 aa5.61□□□□□ -1.51
Smarca1-202ENSMUST00000088973 RelnQ60841 3461 aa5.6□□□□□ -1.51
Smarca1-202ENSMUST00000088973 D6Ertd527eA0A0N4SWI3 464 aa5.57□□□□□ -1.52
Smarca1-202ENSMUST00000088973 Tenm2Q9WTS5 2764 aa5.55□□□□□ -1.52
Smarca1-202ENSMUST00000088973 Muc5acE9QAQ8 3455 aa5.54□□□□□ -1.52
Smarca1-202ENSMUST00000088973 OtogO55225 2910 aa5.52□□□□□ -1.53
Smarca1-202ENSMUST00000088973 Gm5965D3Z724 196 aa5.46□□□□□ -1.54
Smarca1-202ENSMUST00000088973 Megf8P60882 2789 aa5.46□□□□□ -1.54
Smarca1-202ENSMUST00000088973 VwfQ8CIZ8 2813 aa5.45□□□□□ -1.54
Smarca1-202ENSMUST00000088973 Akap9Q70FJ1 3797 aa5.39□□□□□ -1.55
Smarca1-202ENSMUST00000088973 2310057N15RikQ9D6T8 200 aa5.36□□□□□ -1.55
Smarca1-202ENSMUST00000088973 Col7a1Q63870 2944 aa5.35□□□□□ -1.55
Smarca1-202ENSMUST00000088973 Gm21887J3QQ04 176 aa5.34□□□□□ -1.55
Smarca1-202ENSMUST00000088973 Ndufaf8A2AMZ4 74 aa5.3□□□□□ -1.56
Smarca1-202ENSMUST00000088973 DmdP11531 3678 aa5.28□□□□□ -1.56
Smarca1-202ENSMUST00000088973 Gm20537G3UYK7 97 aa5.26□□□□□ -1.57
Smarca1-202ENSMUST00000088973 Fbn1Q61554 2873 aaKnown RBP5.25□□□□□ -1.57
Smarca1-202ENSMUST00000088973 A930033H14RikG5E8X6 103 aa5.2□□□□□ -1.58
Smarca1-202ENSMUST00000088973 2310079G19RikQ9D6L6 185 aa5.18□□□□□ -1.58
Smarca1-202ENSMUST00000088973 Tnp1P10856 55 aa5.18□□□□□ -1.58
Smarca1-202ENSMUST00000088973 Csmd1Q923L3 3564 aa5.17□□□□□ -1.58
Smarca1-202ENSMUST00000088973 Vps13cQ8BX70 3748 aa5.15□□□□□ -1.59
Smarca1-202ENSMUST00000088973 Gm40193A0A1B0GT39 78 aa5.14□□□□□ -1.59
Smarca1-202ENSMUST00000088973 Smg1Q8BKX6 3658 aaKnown RBP5.14□□□□□ -1.59
Smarca1-202ENSMUST00000088973 B930094E09RikQ8C4T2 136 aa5.13□□□□□ -1.59
Smarca1-202ENSMUST00000088973 Gm884A2A9H6 3643 aa5.13□□□□□ -1.59
Smarca1-202ENSMUST00000088973 SpenQ62504 3644 aaKnown RBP5.13□□□□□ -1.59
Smarca1-202ENSMUST00000088973 Gm9736A0A1W2P7N1 277 aa5.11□□□□□ -1.59
Smarca1-202ENSMUST00000088973 Gm9112A2AI92 75 aa5.1□□□□□ -1.59
Smarca1-202ENSMUST00000088973 Muc6Q80T03 2850 aa5.09□□□□□ -1.59
Smarca1-202ENSMUST00000088973 Gm17416Q30KP4 66 aa5.09□□□□□ -1.6
Smarca1-202ENSMUST00000088973 Lama5Q61001 3718 aa5.04□□□□□ -1.6
Smarca1-202ENSMUST00000088973 2210017I01RikA0A0A6YVV1 95 aa5.01□□□□□ -1.61
Smarca1-202ENSMUST00000088973 Muc4Q8JZM8 3443 aa5.01□□□□□ -1.61
Smarca1-202ENSMUST00000088973 Zfhx4Q9JJN2 3550 aa4.98□□□□□ -1.61
Smarca1-202ENSMUST00000088973 Gm11939A2A592 99 aa4.92□□□□□ -1.62
Smarca1-202ENSMUST00000088973 Gm9918Q8BUR5 174 aa4.89□□□□□ -1.63
Smarca1-202ENSMUST00000088973 Gm17402F6Z0L5 76 aa4.86□□□□□ -1.63
Smarca1-202ENSMUST00000088973 Gm10318A0A1W2P728 225 aa4.85□□□□□ -1.63
Smarca1-202ENSMUST00000088973 Krtap19-5O08632 62 aa4.83□□□□□ -1.64
Smarca1-202ENSMUST00000088973 Csmd2V9GX34 3611 aa4.83□□□□□ -1.64
Smarca1-202ENSMUST00000088973 Prm2P07978 107 aa4.82□□□□□ -1.64
Smarca1-202ENSMUST00000088973 Svep1A2AVA0 3567 aa4.81□□□□□ -1.64
Smarca1-202ENSMUST00000088973 Cmya5Q70KF4 3739 aa4.78□□□□□ -1.64
Smarca1-202ENSMUST00000088973 Krtap13-1Q8K198 168 aa4.77□□□□□ -1.65
Smarca1-202ENSMUST00000088973 Crct1Q6PAI5 102 aa4.77□□□□□ -1.65
Smarca1-202ENSMUST00000088973 Krtap3-2Q9D638 99 aa4.74□□□□□ -1.65
Smarca1-202ENSMUST00000088973 Krtap3-3Q9D7P0 99 aa4.74□□□□□ -1.65
Smarca1-202ENSMUST00000088973 Gm19668J3QMD1 248 aa4.71□□□□□ -1.66
Smarca1-202ENSMUST00000088973 LystP97412 3788 aa4.67□□□□□ -1.66
Smarca1-202ENSMUST00000088973 Krtap3-1A2A591 98 aa4.66□□□□□ -1.66
Smarca1-202ENSMUST00000088973 CubnQ9JLB4 3623 aa4.59□□□□□ -1.68
Smarca1-202ENSMUST00000088973 Ank2Q8C8R3 3898 aa4.57□□□□□ -1.68
Smarca1-202ENSMUST00000088973 4933428G20RikQ9D3X4 101 aa4.51□□□□□ -1.69
Smarca1-202ENSMUST00000088973 A0A1Y7VLE6 161 aa4.5□□□□□ -1.69
Smarca1-202ENSMUST00000088973 Dnah14A0A140LIJ4 4489 aa4.48□□□□□ -1.69
Smarca1-202ENSMUST00000088973 Dnah10D3YYQ8 4591 aa4.43□□□□□ -1.7
Smarca1-202ENSMUST00000088973 Dnah5Q8VHE6 4621 aa4.42□□□□□ -1.7
Smarca1-202ENSMUST00000088973 Stard9Q80TF6 4561 aa4.37□□□□□ -1.71
Smarca1-202ENSMUST00000088973 Csmd3Q80T79 3707 aa4.35□□□□□ -1.71
Smarca1-202ENSMUST00000088973 Ryr1E9PZQ0 5035 aa4.33□□□□□ -1.72
Smarca1-202ENSMUST00000088973 Krtap1-5A2A590 122 aa4.33□□□□□ -1.72
Smarca1-202ENSMUST00000088973 PlecQ9QXS1 4691 aaKnown RBP4.32□□□□□ -1.72
Smarca1-202ENSMUST00000088973 Sprr2a3Q4KL71 83 aa4.31□□□□□ -1.72
Smarca1-202ENSMUST00000088973 Sprr2a1Q9CQK8 83 aa4.31□□□□□ -1.72
Smarca1-202ENSMUST00000088973 Hspg2Q05793 3707 aaKnown RBP4.31□□□□□ -1.72
Smarca1-202ENSMUST00000088973 Huwe1Q7TMY8 4377 aaKnown RBP4.3□□□□□ -1.72
Smarca1-202ENSMUST00000088973 Gm6358A0A087WPH4 74 aa4.3□□□□□ -1.72
Smarca1-202ENSMUST00000088973 Vps13dB1ART2 4390 aa4.26□□□□□ -1.73
Smarca1-202ENSMUST00000088973 Krtap19-9aF8WH65 55 aa4.26□□□□□ -1.73
Smarca1-202ENSMUST00000088973 LorP18165 486 aa4.26□□□□□ -1.73
Smarca1-202ENSMUST00000088973 Krtap1-4Q3V2D6 188 aa4.24□□□□□ -1.73
Smarca1-202ENSMUST00000088973 Krtap7-1Q9D3I6 87 aa4.23□□□□□ -1.73
Smarca1-202ENSMUST00000088973 Mycbp2Q7TPH6 4711 aa4.19□□□□□ -1.74
Smarca1-202ENSMUST00000088973 Gm18596A0A1W2P860 280 aa4.19□□□□□ -1.74
Smarca1-202ENSMUST00000088973 BsnO88737 3942 aa4.17□□□□□ -1.74
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms