RNA–Protein interactions for RNA: ENSMUST00000088355.11

Col2a1-202, Transcript of Collagen alpha-1(II) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col2a1, Length 4,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-202ENSMUST00000088355 RelnQ60841 3461 aa8.34□□□□□ -1.07
Col2a1-202ENSMUST00000088355 Myo15aQ9QZZ4 3511 aa8.33□□□□□ -1.08
Col2a1-202ENSMUST00000088355 TgO08710 2766 aa8.32□□□□□ -1.08
Col2a1-202ENSMUST00000088355 Pdzd2E9Q1M1 2796 aa8.31□□□□□ -1.08
Col2a1-202ENSMUST00000088355 Krtap10-10A0A1W2P7T6 217 aa8.3□□□□□ -1.08
Col2a1-202ENSMUST00000088355 ApcQ61315 2845 aa8.29□□□□□ -1.08
Col2a1-202ENSMUST00000088355 Rps29P62274 56 aa8.29□□□□□ -1.08
Col2a1-202ENSMUST00000088355 LrbaQ9ESE1 2856 aa8.28□□□□□ -1.08
Col2a1-202ENSMUST00000088355 Tenm3Q9WTS6 2715 aa8.27□□□□□ -1.09
Col2a1-202ENSMUST00000088355 Tnp2P11378 117 aa8.25□□□□□ -1.09
Col2a1-202ENSMUST00000088355 Camk2n1Q6QWF9 78 aa8.21□□□□□ -1.09
Col2a1-202ENSMUST00000088355 DmdP11531 3678 aa8.21□□□□□ -1.09
Col2a1-202ENSMUST00000088355 BC029722A0A0N4SW31 51 aa8.19□□□□□ -1.1
Col2a1-202ENSMUST00000088355 Gm19426M0QWC7 77 aa8.18□□□□□ -1.1
Col2a1-202ENSMUST00000088355 Rpl37Q9D823 97 aa8.13□□□□□ -1.11
Col2a1-202ENSMUST00000088355 Gm3646F6S692 53 aa8.12□□□□□ -1.11
Col2a1-202ENSMUST00000088355 Helz2E9QAM5 2947 aaKnown RBP8.11□□□□□ -1.11
Col2a1-202ENSMUST00000088355 Gm2696A0A1W2P709 240 aa8.09□□□□□ -1.11
Col2a1-202ENSMUST00000088355 Gm2310J3QNJ2 377 aa8.09□□□□□ -1.11
Col2a1-202ENSMUST00000088355 Akap9Q70FJ1 3797 aa8.08□□□□□ -1.12
Col2a1-202ENSMUST00000088355 SmcpP15265 143 aa8.04□□□□□ -1.12
Col2a1-202ENSMUST00000088355 Tenm1Q9WTS4 2731 aa8.02□□□□□ -1.13
Col2a1-202ENSMUST00000088355 Muc5acE9QAQ8 3455 aa7.99□□□□□ -1.13
Col2a1-202ENSMUST00000088355 Romo1P60603 79 aa7.98□□□□□ -1.13
Col2a1-202ENSMUST00000088355 Vps13cQ8BX70 3748 aa7.97□□□□□ -1.13
Col2a1-202ENSMUST00000088355 Gm10382Q3V0T5 144 aa7.94□□□□□ -1.14
Col2a1-202ENSMUST00000088355 Cox6b2Q80ZN9 88 aa7.91□□□□□ -1.14
Col2a1-202ENSMUST00000088355 4933415A04RikQ9D443 101 aa7.89□□□□□ -1.15
Col2a1-202ENSMUST00000088355 OtogO55225 2910 aa7.85□□□□□ -1.15
Col2a1-202ENSMUST00000088355 D6Ertd527eA0A0N4SWI3 464 aa7.85□□□□□ -1.15
Col2a1-202ENSMUST00000088355 Zfhx3Q61329 3726 aa7.84□□□□□ -1.15
Col2a1-202ENSMUST00000088355 Zfhx4Q9JJN2 3550 aa7.82□□□□□ -1.16
Col2a1-202ENSMUST00000088355 Tenm2Q9WTS5 2764 aa7.81□□□□□ -1.16
Col2a1-202ENSMUST00000088355 Gm5965D3Z724 196 aa7.81□□□□□ -1.16
Col2a1-202ENSMUST00000088355 1700042G07RikB1AUF7 90 aa7.77□□□□□ -1.17
Col2a1-202ENSMUST00000088355 SpenQ62504 3644 aaKnown RBP7.76□□□□□ -1.17
Col2a1-202ENSMUST00000088355 Smg1Q8BKX6 3658 aaKnown RBP7.75□□□□□ -1.17
Col2a1-202ENSMUST00000088355 Lama5Q61001 3718 aa7.73□□□□□ -1.17
Col2a1-202ENSMUST00000088355 Csmd1Q923L3 3564 aa7.72□□□□□ -1.17
Col2a1-202ENSMUST00000088355 2310057N15RikQ9D6T8 200 aa7.69□□□□□ -1.18
Col2a1-202ENSMUST00000088355 A930033H14RikG5E8X6 103 aa7.63□□□□□ -1.19
Col2a1-202ENSMUST00000088355 Megf8P60882 2789 aa7.58□□□□□ -1.2
Col2a1-202ENSMUST00000088355 VwfQ8CIZ8 2813 aa7.58□□□□□ -1.2
Col2a1-202ENSMUST00000088355 Gm21887J3QQ04 176 aa7.53□□□□□ -1.2
Col2a1-202ENSMUST00000088355 Col7a1Q63870 2944 aa7.53□□□□□ -1.2
Col2a1-202ENSMUST00000088355 Gm884A2A9H6 3643 aa7.52□□□□□ -1.21
Col2a1-202ENSMUST00000088355 Fbn1Q61554 2873 aaKnown RBP7.46□□□□□ -1.22
Col2a1-202ENSMUST00000088355 Svep1A2AVA0 3567 aa7.42□□□□□ -1.22
Col2a1-202ENSMUST00000088355 Gm17416Q30KP4 66 aa7.37□□□□□ -1.23
Col2a1-202ENSMUST00000088355 Muc4Q8JZM8 3443 aa7.37□□□□□ -1.23
Col2a1-202ENSMUST00000088355 Gm9736A0A1W2P7N1 277 aa7.33□□□□□ -1.24
Col2a1-202ENSMUST00000088355 Gm20537G3UYK7 97 aa7.29□□□□□ -1.24
Col2a1-202ENSMUST00000088355 Tnp1P10856 55 aa7.28□□□□□ -1.24
Col2a1-202ENSMUST00000088355 Muc6Q80T03 2850 aa7.25□□□□□ -1.25
Col2a1-202ENSMUST00000088355 2310079G19RikQ9D6L6 185 aa7.24□□□□□ -1.25
Col2a1-202ENSMUST00000088355 Cmya5Q70KF4 3739 aa7.23□□□□□ -1.25
Col2a1-202ENSMUST00000088355 Ndufaf8A2AMZ4 74 aa7.22□□□□□ -1.25
Col2a1-202ENSMUST00000088355 Gm40193A0A1B0GT39 78 aa7.21□□□□□ -1.26
Col2a1-202ENSMUST00000088355 B930094E09RikQ8C4T2 136 aa7.2□□□□□ -1.26
Col2a1-202ENSMUST00000088355 2210017I01RikA0A0A6YVV1 95 aa7.19□□□□□ -1.26
Col2a1-202ENSMUST00000088355 Gm9918Q8BUR5 174 aa7.1□□□□□ -1.27
Col2a1-202ENSMUST00000088355 Krtap19-5O08632 62 aa7.09□□□□□ -1.28
Col2a1-202ENSMUST00000088355 Csmd2V9GX34 3611 aa7.08□□□□□ -1.28
Col2a1-202ENSMUST00000088355 Gm17402F6Z0L5 76 aa7.01□□□□□ -1.29
Col2a1-202ENSMUST00000088355 Gm11939A2A592 99 aa7□□□□□ -1.29
Col2a1-202ENSMUST00000088355 Gm9112A2AI92 75 aa6.98□□□□□ -1.29
Col2a1-202ENSMUST00000088355 Ank2Q8C8R3 3898 aa6.95□□□□□ -1.3
Col2a1-202ENSMUST00000088355 Gm10318A0A1W2P728 225 aa6.94□□□□□ -1.3
Col2a1-202ENSMUST00000088355 Prm2P07978 107 aa6.85□□□□□ -1.31
Col2a1-202ENSMUST00000088355 Crct1Q6PAI5 102 aa6.84□□□□□ -1.31
Col2a1-202ENSMUST00000088355 Krtap13-1Q8K198 168 aa6.8□□□□□ -1.32
Col2a1-202ENSMUST00000088355 CubnQ9JLB4 3623 aa6.79□□□□□ -1.32
Col2a1-202ENSMUST00000088355 LystP97412 3788 aa6.73□□□□□ -1.33
Col2a1-202ENSMUST00000088355 Gm19668J3QMD1 248 aa6.71□□□□□ -1.34
Col2a1-202ENSMUST00000088355 Krtap3-2Q9D638 99 aa6.68□□□□□ -1.34
Col2a1-202ENSMUST00000088355 Krtap3-3Q9D7P0 99 aa6.68□□□□□ -1.34
Col2a1-202ENSMUST00000088355 Dnah14A0A140LIJ4 4489 aa6.61□□□□□ -1.35
Col2a1-202ENSMUST00000088355 Krtap3-1A2A591 98 aa6.59□□□□□ -1.35
Col2a1-202ENSMUST00000088355 Xirp2Q4U4S6 3784 aa6.44□□□□□ -1.38
Col2a1-202ENSMUST00000088355 BsnO88737 3942 aa6.43□□□□□ -1.38
Col2a1-202ENSMUST00000088355 Huwe1Q7TMY8 4377 aaKnown RBP6.41□□□□□ -1.38
Col2a1-202ENSMUST00000088355 Dnah10D3YYQ8 4591 aa6.41□□□□□ -1.38
Col2a1-202ENSMUST00000088355 Dnah5Q8VHE6 4621 aa6.37□□□□□ -1.39
Col2a1-202ENSMUST00000088355 Hspg2Q05793 3707 aaKnown RBP6.37□□□□□ -1.39
Col2a1-202ENSMUST00000088355 4933428G20RikQ9D3X4 101 aa6.35□□□□□ -1.39
Col2a1-202ENSMUST00000088355 Gm18596A0A1W2P860 280 aa6.34□□□□□ -1.39
Col2a1-202ENSMUST00000088355 Krtap1-5A2A590 122 aa6.3□□□□□ -1.4
Col2a1-202ENSMUST00000088355 Stard9Q80TF6 4561 aa6.28□□□□□ -1.4
Col2a1-202ENSMUST00000088355 Csmd3Q80T79 3707 aa6.27□□□□□ -1.41
Col2a1-202ENSMUST00000088355 PlecQ9QXS1 4691 aaKnown RBP6.27□□□□□ -1.41
Col2a1-202ENSMUST00000088355 Vps13dB1ART2 4390 aa6.23□□□□□ -1.41
Col2a1-202ENSMUST00000088355 Krtap19-9aF8WH65 55 aa6.19□□□□□ -1.42
Col2a1-202ENSMUST00000088355 Ryr1E9PZQ0 5035 aa6.17□□□□□ -1.42
Col2a1-202ENSMUST00000088355 LorP18165 486 aa6.17□□□□□ -1.42
Col2a1-202ENSMUST00000088355 Sprr2a3Q4KL71 83 aa6.13□□□□□ -1.43
Col2a1-202ENSMUST00000088355 Sprr2a1Q9CQK8 83 aa6.13□□□□□ -1.43
Col2a1-202ENSMUST00000088355 Gm6358A0A087WPH4 74 aa6.13□□□□□ -1.43
Col2a1-202ENSMUST00000088355 Krtap1-4Q3V2D6 188 aa6.12□□□□□ -1.43
Col2a1-202ENSMUST00000088355 Dnah17Q69Z23 4481 aa6.11□□□□□ -1.43
Col2a1-202ENSMUST00000088355 Krtap8-1O08633 61 aa6.1□□□□□ -1.43
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms