RNA–Protein interactions for RNA: ENSMUST00000084885.11

Ubp1-202, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 5 BASIC

Gene Ubp1, Length 3,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-202ENSMUST00000084885 NbdyA0A0N4SUI7 68 aa10.02□□□□□ -0.81
Ubp1-202ENSMUST00000084885 Csmd3Q80T79 3707 aa10.02□□□□□ -0.81
Ubp1-202ENSMUST00000084885 Gm20604F8WIA3 75 aa10.01□□□□□ -0.81
Ubp1-202ENSMUST00000084885 Dnah14A0A140LIJ4 4489 aa10□□□□□ -0.81
Ubp1-202ENSMUST00000084885 Gm10160F6Y577 67 aa9.99□□□□□ -0.81
Ubp1-202ENSMUST00000084885 Defb1P56386 69 aa9.99□□□□□ -0.81
Ubp1-202ENSMUST00000084885 Chtf8P0CG14 533 aa9.96□□□□□ -0.82
Ubp1-202ENSMUST00000084885 Gm20661K7N787 53 aa9.95□□□□□ -0.82
Ubp1-202ENSMUST00000084885 Ndufb1P0DN34 57 aa9.9□□□□□ -0.82
Ubp1-202ENSMUST00000084885 Krtap14O08640 167 aa9.9□□□□□ -0.83
Ubp1-202ENSMUST00000084885 Gm10139O88245 57 aa9.88□□□□□ -0.83
Ubp1-202ENSMUST00000084885 Phxr4P15974 95 aa9.88□□□□□ -0.83
Ubp1-202ENSMUST00000084885 Odf3bQ5M8M2 238 aa9.85□□□□□ -0.83
Ubp1-202ENSMUST00000084885 Krtap29-1A2A5X4 342 aa9.85□□□□□ -0.83
Ubp1-202ENSMUST00000084885 Cypt15B1AXS0 87 aa9.84□□□□□ -0.83
Ubp1-202ENSMUST00000084885 Gm10999F6Q4M4 69 aa9.84□□□□□ -0.83
Ubp1-202ENSMUST00000084885 Gm9918Q8BUR5 174 aa9.79□□□□□ -0.84
Ubp1-202ENSMUST00000084885 Cypt14J3QPF7 87 aa9.77□□□□□ -0.85
Ubp1-202ENSMUST00000084885 Q8BGJ3 129 aa9.71□□□□□ -0.86
Ubp1-202ENSMUST00000084885 Dnah7bL7N1Y0 4068 aa9.59□□□□□ -0.87
Ubp1-202ENSMUST00000084885 Gm3646F6S692 53 aa9.55□□□□□ -0.88
Ubp1-202ENSMUST00000084885 4933415A04RikQ9D443 101 aa9.55□□□□□ -0.88
Ubp1-202ENSMUST00000084885 Tnp2P11378 117 aa9.54□□□□□ -0.88
Ubp1-202ENSMUST00000084885 Gm16253D3Z167 63 aa9.54□□□□□ -0.88
Ubp1-202ENSMUST00000084885 Gm21798J3QNU5 87 aa9.49□□□□□ -0.89
Ubp1-202ENSMUST00000084885 Huwe1Q7TMY8 4377 aaKnown RBP9.49□□□□□ -0.89
Ubp1-202ENSMUST00000084885 CriptO70333 101 aa9.47□□□□□ -0.89
Ubp1-202ENSMUST00000084885 Gm26620Q9CY65 116 aa9.47□□□□□ -0.89
Ubp1-202ENSMUST00000084885 Krtap15-1Q9QZU5 150 aa9.46□□□□□ -0.9
Ubp1-202ENSMUST00000084885 Limd2Q8BGB5 128 aa9.43□□□□□ -0.9
Ubp1-202ENSMUST00000084885 1700042G07RikB1AUF7 90 aa9.42□□□□□ -0.9
Ubp1-202ENSMUST00000084885 Gm9821Q8K076 103 aa9.42□□□□□ -0.9
Ubp1-202ENSMUST00000084885 Gm37013Q8K491 104 aa9.39□□□□□ -0.91
Ubp1-202ENSMUST00000084885 TnxbO35452 4006 aa9.39□□□□□ -0.91
Ubp1-202ENSMUST00000084885 Gm10643Q3URG9 111 aa9.38□□□□□ -0.91
Ubp1-202ENSMUST00000084885 2310034C09RikQ9D746 214 aa9.38□□□□□ -0.91
Ubp1-202ENSMUST00000084885 Gm3880A0A1B0GSB3 72 aa9.32□□□□□ -0.92
Ubp1-202ENSMUST00000084885 Fras1Q80T14 4010 aa9.32□□□□□ -0.92
Ubp1-202ENSMUST00000084885 4930507D05RikQ8C9C9 103 aa9.31□□□□□ -0.92
Ubp1-202ENSMUST00000084885 Uqcr11Q9CPX8 56 aa9.3□□□□□ -0.92
Ubp1-202ENSMUST00000084885 Gm9736A0A1W2P7N1 277 aa9.28□□□□□ -0.92
Ubp1-202ENSMUST00000084885 Kmt2aP55200 3966 aa9.25□□□□□ -0.93
Ubp1-202ENSMUST00000084885 Gm4491E0CX42 125 aa9.25□□□□□ -0.93
Ubp1-202ENSMUST00000084885 Rnase13Q5GAM7 153 aa9.25□□□□□ -0.93
Ubp1-202ENSMUST00000084885 PlecQ9QXS1 4691 aaKnown RBP9.24□□□□□ -0.93
Ubp1-202ENSMUST00000084885 PrkdcP97313 4128 aa9.24□□□□□ -0.93
Ubp1-202ENSMUST00000084885 Gm5965D3Z724 196 aa9.23□□□□□ -0.93
Ubp1-202ENSMUST00000084885 Gm12216A0A1W2P827 62 aa9.23□□□□□ -0.93
Ubp1-202ENSMUST00000084885 Dnah6E9Q0B6 4144 aa9.22□□□□□ -0.93
Ubp1-202ENSMUST00000084885 Dnah5Q8VHE6 4621 aa9.21□□□□□ -0.94
Ubp1-202ENSMUST00000084885 Gm2310J3QNJ2 377 aa9.2□□□□□ -0.94
Ubp1-202ENSMUST00000084885 Gm17606F6ZL36 78 aa9.2□□□□□ -0.94
Ubp1-202ENSMUST00000084885 Ryr1E9PZQ0 5035 aa9.18□□□□□ -0.94
Ubp1-202ENSMUST00000084885 Ryr3A2AGL3 4863 aa9.17□□□□□ -0.94
Ubp1-202ENSMUST00000084885 Dnah11E9Q7N9 4488 aa9.16□□□□□ -0.94
Ubp1-202ENSMUST00000084885 Stard9Q80TF6 4561 aa9.14□□□□□ -0.95
Ubp1-202ENSMUST00000084885 Dnah9B1AR51 4484 aa9.11□□□□□ -0.95
Ubp1-202ENSMUST00000084885 Dnah17Q69Z23 4481 aa9.1□□□□□ -0.95
Ubp1-202ENSMUST00000084885 Gm5767A0A0J9YTU8 78 aa9.09□□□□□ -0.95
Ubp1-202ENSMUST00000084885 Mp68P56379 58 aa8.99□□□□□ -0.97
Ubp1-202ENSMUST00000084885 2310057N15RikQ9D6T8 200 aa8.98□□□□□ -0.97
Ubp1-202ENSMUST00000084885 Krtap19-5O08632 62 aa8.91□□□□□ -0.98
Ubp1-202ENSMUST00000084885 Vps13dB1ART2 4390 aa8.86□□□□□ -0.99
Ubp1-202ENSMUST00000084885 Dnah3Q8BW94 4083 aa8.84□□□□□ -0.99
Ubp1-202ENSMUST00000084885 Lrp1bQ9JI18 4599 aa8.8□□□□□ -1
Ubp1-202ENSMUST00000084885 Dnah1E9Q8T7 4250 aa8.8□□□□□ -1
Ubp1-202ENSMUST00000084885 Lrp1Q91ZX7 4545 aaKnown RBP8.77□□□□□ -1.01
Ubp1-202ENSMUST00000084885 HydinQ80W93 5154 aa8.76□□□□□ -1.01
Ubp1-202ENSMUST00000084885 Rps29P62274 56 aa8.75□□□□□ -1.01
Ubp1-202ENSMUST00000084885 Dnah7cA0A087WR13 4024 aa8.74□□□□□ -1.01
Ubp1-202ENSMUST00000084885 Gm10318A0A1W2P728 225 aa8.72□□□□□ -1.01
Ubp1-202ENSMUST00000084885 D6Ertd527eA0A0N4SWI3 464 aa8.72□□□□□ -1.01
Ubp1-202ENSMUST00000084885 Sec61bQ9CQS8 96 aaKnown RBP8.7□□□□□ -1.02
Ubp1-202ENSMUST00000084885 Dync2h1Q45VK7 4306 aa8.69□□□□□ -1.02
Ubp1-202ENSMUST00000084885 Mycbp2Q7TPH6 4711 aa8.68□□□□□ -1.02
Ubp1-202ENSMUST00000084885 Rpl37Q9D823 97 aa8.67□□□□□ -1.02
Ubp1-202ENSMUST00000084885 Dnah7aE9Q0T8 4024 aa8.67□□□□□ -1.02
Ubp1-202ENSMUST00000084885 Fat3Q8BNA6 4555 aa8.66□□□□□ -1.02
Ubp1-202ENSMUST00000084885 Spink7Q6IE32 76 aa8.66□□□□□ -1.02
Ubp1-202ENSMUST00000084885 ApobE9Q414 4505 aa8.66□□□□□ -1.02
Ubp1-202ENSMUST00000084885 Pla2g10Q9QXX3 151 aa8.65□□□□□ -1.03
Ubp1-202ENSMUST00000084885 Kiaa1109A2AAE1 5005 aa8.63□□□□□ -1.03
Ubp1-202ENSMUST00000084885 Gm11939A2A592 99 aa8.61□□□□□ -1.03
Ubp1-202ENSMUST00000084885 Fam229aB2KGE5 128 aa8.59□□□□□ -1.03
Ubp1-202ENSMUST00000084885 Gm20538F6Z9R1 75 aa8.58□□□□□ -1.04
Ubp1-202ENSMUST00000084885 Gm10382Q3V0T5 144 aa8.58□□□□□ -1.04
Ubp1-202ENSMUST00000084885 Crct1Q6PAI5 102 aa8.58□□□□□ -1.04
Ubp1-202ENSMUST00000084885 Dync1h1Q9JHU4 4644 aaKnown RBP8.56□□□□□ -1.04
Ubp1-202ENSMUST00000084885 Herc2Q4U2R1 4836 aa8.54□□□□□ -1.04
Ubp1-202ENSMUST00000084885 Fat1A0A1L1SQU7 4645 aa8.54□□□□□ -1.04
Ubp1-202ENSMUST00000084885 Romo1P60603 79 aa8.53□□□□□ -1.04
Ubp1-202ENSMUST00000084885 Cox6b2Q80ZN9 88 aa8.51□□□□□ -1.05
Ubp1-202ENSMUST00000084885 Gm9955Q8CEJ8 102 aa8.5□□□□□ -1.05
Ubp1-202ENSMUST00000084885 Lrp2A2ARV4 4660 aa8.48□□□□□ -1.05
Ubp1-202ENSMUST00000084885 Hectd4E9Q2E4 4418 aa8.47□□□□□ -1.05
Ubp1-202ENSMUST00000084885 Dnah2P0C6F1 4456 aa8.46□□□□□ -1.05
Ubp1-202ENSMUST00000084885 Gm20537G3UYK7 97 aa8.46□□□□□ -1.06
Ubp1-202ENSMUST00000084885 A930033H14RikG5E8X6 103 aa8.44□□□□□ -1.06
Ubp1-202ENSMUST00000084885 2310079G19RikQ9D6L6 185 aa8.42□□□□□ -1.06
Ubp1-202ENSMUST00000084885 Ndufaf8A2AMZ4 74 aa8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 88.3 ms