RNA–Protein interactions for RNA: ENSMUST00000074679.3

Sh3rf2-202, Transcript of Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf2, Length 4,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2-202ENSMUST00000074679 Gm21887J3QQ04 176 aa4.63□□□□□ -1.67
Sh3rf2-202ENSMUST00000074679 VwfQ8CIZ8 2813 aa4.61□□□□□ -1.67
Sh3rf2-202ENSMUST00000074679 Phxr4P15974 95 aa4.61□□□□□ -1.67
Sh3rf2-202ENSMUST00000074679 Sec61bQ9CQS8 96 aaKnown RBP4.61□□□□□ -1.67
Sh3rf2-202ENSMUST00000074679 Chtf8P0CG14 533 aa4.6□□□□□ -1.67
Sh3rf2-202ENSMUST00000074679 Gm7276Q3TYW4 209 aa4.59□□□□□ -1.67
Sh3rf2-202ENSMUST00000074679 Anapc11Q9CPX9 84 aa4.58□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 2310061N02RikQ9D6S9 174 aa4.58□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 Zcchc13Q9D548 170 aa4.58□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 Sprr1aQ62266 144 aa4.57□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 Gm9507D3Z5T3 223 aa4.56□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 Gm10065F6TJM2 114 aa4.55□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 Hspg2Q05793 3707 aaKnown RBP4.54□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 BsnO88737 3942 aa4.54□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 NbdyA0A0N4SUI7 68 aa4.53□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 2310050C09RikG5E8Z3 280 aa4.53□□□□□ -1.68
Sh3rf2-202ENSMUST00000074679 1700042G07RikB1AUF7 90 aa4.52□□□□□ -1.69
Sh3rf2-202ENSMUST00000074679 Krtap15-1Q9QZU5 150 aa4.49□□□□□ -1.69
Sh3rf2-202ENSMUST00000074679 Cypt14J3QPF7 87 aa4.47□□□□□ -1.69
Sh3rf2-202ENSMUST00000074679 4933415A04RikQ9D443 101 aa4.47□□□□□ -1.69
Sh3rf2-202ENSMUST00000074679 CriptO70333 101 aa4.47□□□□□ -1.69
Sh3rf2-202ENSMUST00000074679 Odf3bQ5M8M2 238 aa4.45□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Megf8P60882 2789 aa4.45□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Gm10643Q3URG9 111 aa4.44□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Krtap29-1A2A5X4 342 aa4.43□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 6030445D17RikE9Q8F9 148 aa4.43□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 2310034C09RikQ9D746 214 aa4.43□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Camk2n1Q6QWF9 78 aa4.43□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Uqcr11Q9CPX8 56 aa4.42□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Krtap10-4Q08EG8 221 aa4.42□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Gm21798J3QNU5 87 aa4.41□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Muc6Q80T03 2850 aa4.41□□□□□ -1.7
Sh3rf2-202ENSMUST00000074679 Gm10139O88245 57 aa4.4□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Tenm2Q9WTS5 2764 aa4.39□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Gm19426M0QWC7 77 aa4.39□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Krtap13O88375 197 aa4.39□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Gm37013Q8K491 104 aa4.39□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Gm3646F6S692 53 aa4.38□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Gm9955Q8CEJ8 102 aa4.37□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Gm5767A0A0J9YTU8 78 aa4.37□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Csmd3Q80T79 3707 aa4.37□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Dnah7bL7N1Y0 4068 aa4.35□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Gm4491E0CX42 125 aa4.35□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Gm3880A0A1B0GSB3 72 aa4.35□□□□□ -1.71
Sh3rf2-202ENSMUST00000074679 Krtap10-10A0A1W2P7T6 217 aa4.32□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Dnah14A0A140LIJ4 4489 aa4.31□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Krtap14O08640 167 aa4.31□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Prm2P07978 107 aa4.31□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Gm2310J3QNJ2 377 aa4.3□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Gm2696A0A1W2P709 240 aa4.3□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 BC029722A0A0N4SW31 51 aa4.29□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Tnp2P11378 117 aa4.29□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Gm9918Q8BUR5 174 aa4.29□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Dnah3Q8BW94 4083 aa4.28□□□□□ -1.72
Sh3rf2-202ENSMUST00000074679 Dnah10D3YYQ8 4591 aa4.24□□□□□ -1.73
Sh3rf2-202ENSMUST00000074679 Gm16253D3Z167 63 aa4.24□□□□□ -1.73
Sh3rf2-202ENSMUST00000074679 TnxbO35452 4006 aa4.24□□□□□ -1.73
Sh3rf2-202ENSMUST00000074679 Huwe1Q7TMY8 4377 aaKnown RBP4.19□□□□□ -1.74
Sh3rf2-202ENSMUST00000074679 Dnah17Q69Z23 4481 aa4.16□□□□□ -1.74
Sh3rf2-202ENSMUST00000074679 Rpl37Q9D823 97 aa4.12□□□□□ -1.75
Sh3rf2-202ENSMUST00000074679 Dnah6E9Q0B6 4144 aa4.11□□□□□ -1.75
Sh3rf2-202ENSMUST00000074679 Rps29P62274 56 aa4.1□□□□□ -1.75
Sh3rf2-202ENSMUST00000074679 Kmt2aP55200 3966 aa4.08□□□□□ -1.76
Sh3rf2-202ENSMUST00000074679 PlecQ9QXS1 4691 aaKnown RBP4.07□□□□□ -1.76
Sh3rf2-202ENSMUST00000074679 Dnah11E9Q7N9 4488 aa4.05□□□□□ -1.76
Sh3rf2-202ENSMUST00000074679 A930033H14RikG5E8X6 103 aa4.01□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 D6Ertd527eA0A0N4SWI3 464 aa4□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 Gm10382Q3V0T5 144 aa4□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 Dync2h1Q45VK7 4306 aa4□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 Vps13dB1ART2 4390 aa3.99□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 Romo1P60603 79 aa3.99□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 PrkdcP97313 4128 aa3.99□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 Dnah9B1AR51 4484 aa3.98□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 Dnah5Q8VHE6 4621 aa3.97□□□□□ -1.77
Sh3rf2-202ENSMUST00000074679 2310079G19RikQ9D6L6 185 aa3.95□□□□□ -1.78
Sh3rf2-202ENSMUST00000074679 2310057N15RikQ9D6T8 200 aa3.95□□□□□ -1.78
Sh3rf2-202ENSMUST00000074679 Krtap19-5O08632 62 aa3.94□□□□□ -1.78
Sh3rf2-202ENSMUST00000074679 Ndufaf8A2AMZ4 74 aa3.93□□□□□ -1.78
Sh3rf2-202ENSMUST00000074679 Gm5965D3Z724 196 aa3.93□□□□□ -1.78
Sh3rf2-202ENSMUST00000074679 Dnah1E9Q8T7 4250 aa3.92□□□□□ -1.78
Sh3rf2-202ENSMUST00000074679 Cox6b2Q80ZN9 88 aa3.9□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Gm20537G3UYK7 97 aa3.89□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Dnah7aE9Q0T8 4024 aa3.89□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Dnah7cA0A087WR13 4024 aa3.88□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Gm9736A0A1W2P7N1 277 aa3.88□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Fras1Q80T14 4010 aa3.88□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Stard9Q80TF6 4561 aa3.87□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Dync1h1Q9JHU4 4644 aaKnown RBP3.85□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Gm9112A2AI92 75 aa3.85□□□□□ -1.79
Sh3rf2-202ENSMUST00000074679 Tnp1P10856 55 aa3.84□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Pkd1O08852 4293 aa3.83□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Krtap3-2Q9D638 99 aa3.83□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Krtap3-3Q9D7P0 99 aa3.83□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Lrp1bQ9JI18 4599 aa3.83□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Ryr3A2AGL3 4863 aa3.82□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Hectd4E9Q2E4 4418 aa3.82□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Dnah2P0C6F1 4456 aa3.81□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Ryr1E9PZQ0 5035 aa3.8□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 ApobE9Q414 4505 aa3.8□□□□□ -1.8
Sh3rf2-202ENSMUST00000074679 Gm11939A2A592 99 aa3.8□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 108.6 ms