RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 A530084C06RikQ3UTW2 186 aa5.16□□□□□ -1.58
Ccdc28a-201ENSMUST00000052648 Igkv3-4A0A140T8Q4 119 aa5.15□□□□□ -1.58
Ccdc28a-201ENSMUST00000052648 HydinQ80W93 5154 aa5.14□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Ormdl1Q921I0 153 aa5.14□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Trav14d-3-dv8A0A075B619 120 aa5.13□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Gm17689B3GLJ4 109 aa5.13□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Gm16253D3Z167 63 aa5.13□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Gm21886J3QJU9 214 aa5.13□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Pxt1Q8K459 51 aa5.13□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Dph3Q8K0W9 82 aa5.13□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Gm44790A0A0N4SV91 103 aa5.12□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Mycbp2Q7TPH6 4711 aa5.11□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Tmem213Q08EA8 116 aa5.11□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Krtap3-2Q9D638 99 aa5.11□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Krtap3-3Q9D7P0 99 aa5.11□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Gm18596A0A1W2P860 280 aa5.1□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Gtf2h5Q8K2X8 71 aa5.1□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Gm37013Q8K491 104 aa5.1□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Mrpl34Q99N91 92 aa5.1□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 4930535I16RikQ9CUI2 172 aa5.1□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 Rps29P62274 56 aa5.09□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 UqcrqQ9CQ69 82 aa5.09□□□□□ -1.59
Ccdc28a-201ENSMUST00000052648 PcloQ9QYX7 5068 aa5.09□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 Gm9736A0A1W2P7N1 277 aa5.08□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 C130032M10RikQ8C888 123 aa5.08□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 Igkv8-21A0A140T8P7 120 aa5.07□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 Gm2310J3QNJ2 377 aa5.07□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 Sec61gP60060 68 aa5.07□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 Lyrm7Q9DA03 104 aa5.06□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 Ubl5Q9EPV8 73 aa5.06□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 MplkipQ9D011 178 aa5.04□□□□□ -1.6
Ccdc28a-201ENSMUST00000052648 Fam240bJ3QMB3 78 aa5.02□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Smlr1J3QMJ4 66 aa5.02□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Lrp2A2ARV4 4660 aa5.02□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Reg3aO09037 175 aa5.01□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Defa21Q8C1P2 93 aa4.99□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Cypt15B1AXS0 87 aa4.99□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Gm19402J3QJV4 266 aa4.98□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Tmem254aP0DN89 123 aa4.98□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Tmem254bP0DN90 123 aa4.98□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Tmem254cP0DN91 123 aa4.98□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Igkv8-19A0A0G2JFN8 121 aa4.97□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 Trav3-1Q5R1I8 114 aa4.97□□□□□ -1.61
Ccdc28a-201ENSMUST00000052648 GhrhP16043 103 aa4.96□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Gm5965D3Z724 196 aa4.95□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Herc1E9PZP8 4859 aa4.95□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Cystm1Q8K353 104 aa4.94□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Igkv3-3A0A140T8Q0 119 aa4.93□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Gm5767A0A0J9YTU8 78 aa4.93□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 BatfO35284 125 aa4.92□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Gm26620Q9CY65 116 aa4.91□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Hist1h4aP62806 103 aaKnown RBP4.9□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 Prr15lQ8JZM2 100 aa4.9□□□□□ -1.62
Ccdc28a-201ENSMUST00000052648 A930033H14RikG5E8X6 103 aa4.9□□□□□ -1.63
Ccdc28a-201ENSMUST00000052648 Lce1dQ9D731 133 aa4.89□□□□□ -1.63
Ccdc28a-201ENSMUST00000052648 BikO70337 150 aa4.89□□□□□ -1.63
Ccdc28a-201ENSMUST00000052648 Prm1P02319 51 aa4.87□□□□□ -1.63
Ccdc28a-201ENSMUST00000052648 Defb13Q8R2I4 64 aa4.85□□□□□ -1.63
Ccdc28a-201ENSMUST00000052648 Gm10267M0QWD8 85 aa4.85□□□□□ -1.63
Ccdc28a-201ENSMUST00000052648 A0A286YE49 62 aa4.84□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Gm7735D3YX18 52 aa4.83□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Samd13D3YUG0 102 aa4.83□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Spink8Q09TK9 105 aa4.82□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Fam229bQ8CF36 80 aa4.82□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Gm9821Q8K076 103 aa4.82□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Atp5eP56382 52 aa4.81□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Krtap15-1Q9QZU5 150 aa4.8□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Sec61bQ9CQS8 96 aaKnown RBP4.8□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Ndufc1Q9CQY9 76 aa4.8□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Naa38Q9D2U5 125 aa4.79□□□□□ -1.64
Ccdc28a-201ENSMUST00000052648 Anapc13Q8R034 74 aa4.77□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 Rpl37Q9D823 97 aa4.76□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 4932415D10RikA0A1W2P6U8 4986 aa4.76□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 Gm9789Q8BIG3 52 aa4.76□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 SmcpP15265 143 aa4.75□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 1700074P13RikQ9D9G7 251 aa4.75□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 Ush2AQ2QI47 5193 aa4.74□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 2210017I01RikA0A0A6YVV1 95 aa4.74□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 Gm28539A0A087WSL9 92 aa4.71□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 Smim20D3Z7Q2 69 aa4.71□□□□□ -1.65
Ccdc28a-201ENSMUST00000052648 7530416G11RikJ3QJX6 159 aa4.71□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 4930518I15RikQ3V2W7 57 aa4.71□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 Apoc4Q61268 124 aa4.67□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 Rnase13Q5GAM7 153 aa4.67□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 Serp2Q6TAW2 65 aa4.67□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 2310057N15RikQ9D6T8 200 aa4.66□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 Hmcn2A2AJ76 5100 aa4.66□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 Gm4491E0CX42 125 aa4.65□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 2310034C09RikQ9D746 214 aa4.65□□□□□ -1.66
Ccdc28a-201ENSMUST00000052648 Atox1O08997 68 aaKnown RBP4.63□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Ubr4A2AN08 5180 aa4.62□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 B230307C23RikQ8BLB2 64 aa4.62□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Q8BGJ3 129 aa4.61□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Gm10999F6Q4M4 69 aa4.6□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Chtf8P0CG14 533 aa4.6□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Coa6Q8BGD8 79 aa4.6□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Defb38Q7TNV7 63 aa4.6□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Spint4Q9D263 159 aa4.6□□□□□ -1.67
Ccdc28a-201ENSMUST00000052648 Krtap17-1A2A5X6 109 aa4.58□□□□□ -1.68
Ccdc28a-201ENSMUST00000052648 Gm10337F7DEP7 55 aa4.57□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms