RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Odf3bQ5M8M2 238 aa12.42□□□□□ -0.42
Ctdsp1-201ENSMUST00000027367 SptssbQ925E8 76 aa12.41□□□□□ -0.42
Ctdsp1-201ENSMUST00000027367 Dnah7cA0A087WR13 4024 aa12.41□□□□□ -0.42
Ctdsp1-201ENSMUST00000027367 Igkv3-7A0A0G2JE31 119 aa12.37□□□□□ -0.43
Ctdsp1-201ENSMUST00000027367 Dnah5Q8VHE6 4621 aa12.37□□□□□ -0.43
Ctdsp1-201ENSMUST00000027367 Chtf8P0CG14 533 aa12.36□□□□□ -0.43
Ctdsp1-201ENSMUST00000027367 Gm10642Q3TWM1 71 aa12.36□□□□□ -0.43
Ctdsp1-201ENSMUST00000027367 Gm27235Q3UW50 83 aa12.36□□□□□ -0.43
Ctdsp1-201ENSMUST00000027367 Gm21886J3QJU9 214 aa12.34□□□□□ -0.43
Ctdsp1-201ENSMUST00000027367 Gm28230A0A0A0MQ91 144 aa12.33□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 Q8K1L6 76 aa12.33□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 Chchd10Q7TNL9 138 aa12.32□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 Igkv3-5A0A140T8M6 119 aa12.32□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 Krtap10-4Q08EG8 221 aa12.32□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 Reg3aO09037 175 aa12.3□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 1600014C23RikQ9DAX4 101 aa12.3□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 Adm2Q7TNK8 150 aa12.28□□□□□ -0.44
Ctdsp1-201ENSMUST00000027367 NbdyA0A0N4SUI7 68 aa12.25□□□□□ -0.45
Ctdsp1-201ENSMUST00000027367 Gm20604F8WIA3 75 aa12.24□□□□□ -0.45
Ctdsp1-201ENSMUST00000027367 Ndufb1P0DN34 57 aa12.24□□□□□ -0.45
Ctdsp1-201ENSMUST00000027367 Gm20661K7N787 53 aa12.23□□□□□ -0.45
Ctdsp1-201ENSMUST00000027367 Gm9821Q8K076 103 aa12.2□□□□□ -0.46
Ctdsp1-201ENSMUST00000027367 Gpr15lA0A0B4J1N3 78 aa12.2□□□□□ -0.46
Ctdsp1-201ENSMUST00000027367 Vps13dB1ART2 4390 aa12.18□□□□□ -0.46
Ctdsp1-201ENSMUST00000027367 Rpl37aP61514 92 aa12.18□□□□□ -0.46
Ctdsp1-201ENSMUST00000027367 Gm10267M0QWD8 85 aa12.14□□□□□ -0.47
Ctdsp1-201ENSMUST00000027367 Tnp2P11378 117 aa12.13□□□□□ -0.47
Ctdsp1-201ENSMUST00000027367 Krtap14O08640 167 aa12.12□□□□□ -0.47
Ctdsp1-201ENSMUST00000027367 Anapc11Q9CPX9 84 aa12.11□□□□□ -0.47
Ctdsp1-201ENSMUST00000027367 Dnah2P0C6F1 4456 aa12.1□□□□□ -0.47
Ctdsp1-201ENSMUST00000027367 Znf706Q9D115 76 aaKnown RBP12.08□□□□□ -0.47
Ctdsp1-201ENSMUST00000027367 Pkd1O08852 4293 aa12.08□□□□□ -0.48
Ctdsp1-201ENSMUST00000027367 Gm2310J3QNJ2 377 aa12.08□□□□□ -0.48
Ctdsp1-201ENSMUST00000027367 Defb39Q70KL3 74 aa12.07□□□□□ -0.48
Ctdsp1-201ENSMUST00000027367 Cypt14J3QPF7 87 aa12.05□□□□□ -0.48
Ctdsp1-201ENSMUST00000027367 Krtap13O88375 197 aa12.04□□□□□ -0.48
Ctdsp1-201ENSMUST00000027367 Hectd4E9Q2E4 4418 aa12.03□□□□□ -0.48
Ctdsp1-201ENSMUST00000027367 Ndufs5Q99LY9 106 aa12.03□□□□□ -0.48
Ctdsp1-201ENSMUST00000027367 2310034C09RikQ9D746 214 aa12.01□□□□□ -0.49
Ctdsp1-201ENSMUST00000027367 Defb38Q7TNV7 63 aa12.01□□□□□ -0.49
Ctdsp1-201ENSMUST00000027367 ApobE9Q414 4505 aa12□□□□□ -0.49
Ctdsp1-201ENSMUST00000027367 Krtap10-10A0A1W2P7T6 217 aa11.98□□□□□ -0.49
Ctdsp1-201ENSMUST00000027367 Limd2Q8BGB5 128 aa11.98□□□□□ -0.49
Ctdsp1-201ENSMUST00000027367 Stard9Q80TF6 4561 aa11.98□□□□□ -0.49
Ctdsp1-201ENSMUST00000027367 Gm2696A0A1W2P709 240 aa11.96□□□□□ -0.5
Ctdsp1-201ENSMUST00000027367 Gm16253D3Z167 63 aa11.91□□□□□ -0.5
Ctdsp1-201ENSMUST00000027367 Lrp1bQ9JI18 4599 aa11.9□□□□□ -0.5
Ctdsp1-201ENSMUST00000027367 Uqcr11Q9CPX8 56 aa11.9□□□□□ -0.5
Ctdsp1-201ENSMUST00000027367 Cypt15B1AXS0 87 aa11.87□□□□□ -0.51
Ctdsp1-201ENSMUST00000027367 Gm12216A0A1W2P827 62 aa11.83□□□□□ -0.52
Ctdsp1-201ENSMUST00000027367 Fat1A0A1L1SQU7 4645 aa11.79□□□□□ -0.52
Ctdsp1-201ENSMUST00000027367 Dync1h1Q9JHU4 4644 aaKnown RBP11.79□□□□□ -0.52
Ctdsp1-201ENSMUST00000027367 Q8BGJ3 129 aa11.77□□□□□ -0.53
Ctdsp1-201ENSMUST00000027367 Pkhd1E9PZ36 4059 aa11.76□□□□□ -0.53
Ctdsp1-201ENSMUST00000027367 Spaca4Q80ZQ0 127 aa11.74□□□□□ -0.53
Ctdsp1-201ENSMUST00000027367 Ryr3A2AGL3 4863 aa11.72□□□□□ -0.53
Ctdsp1-201ENSMUST00000027367 Gm21798J3QNU5 87 aa11.69□□□□□ -0.54
Ctdsp1-201ENSMUST00000027367 Fat2Q5F226 4351 aa11.62□□□□□ -0.55
Ctdsp1-201ENSMUST00000027367 Pla2g10Q9QXX3 151 aa11.56□□□□□ -0.56
Ctdsp1-201ENSMUST00000027367 Wfdc3Q14AE4 130 aa11.55□□□□□ -0.56
Ctdsp1-201ENSMUST00000027367 SacsQ9JLC8 4582 aa11.54□□□□□ -0.56
Ctdsp1-201ENSMUST00000027367 Defb13Q8R2I4 64 aa11.54□□□□□ -0.56
Ctdsp1-201ENSMUST00000027367 RetnlbQ99P86 105 aa11.51□□□□□ -0.57
Ctdsp1-201ENSMUST00000027367 Gm20538F6Z9R1 75 aa11.42□□□□□ -0.58
Ctdsp1-201ENSMUST00000027367 Ryr2E9Q401 4966 aaKnown RBP11.42□□□□□ -0.58
Ctdsp1-201ENSMUST00000027367 Mp68P56379 58 aa11.32□□□□□ -0.6
Ctdsp1-201ENSMUST00000027367 Vps13bQ80TY5 3993 aa11.26□□□□□ -0.61
Ctdsp1-201ENSMUST00000027367 Pkhd1l1Q80ZA4 4249 aa11.26□□□□□ -0.61
Ctdsp1-201ENSMUST00000027367 Lrp1Q91ZX7 4545 aaKnown RBP11.26□□□□□ -0.61
Ctdsp1-201ENSMUST00000027367 Kmt2cQ8BRH4 4903 aa11.24□□□□□ -0.61
Ctdsp1-201ENSMUST00000027367 Gm10999F6Q4M4 69 aa11.22□□□□□ -0.61
Ctdsp1-201ENSMUST00000027367 Rps29P62274 56 aa11.22□□□□□ -0.61
Ctdsp1-201ENSMUST00000027367 Romo1P60603 79 aa11.18□□□□□ -0.62
Ctdsp1-201ENSMUST00000027367 Defb1P56386 69 aa11.17□□□□□ -0.62
Ctdsp1-201ENSMUST00000027367 Krtap3-2Q9D638 99 aa11.14□□□□□ -0.63
Ctdsp1-201ENSMUST00000027367 Krtap3-3Q9D7P0 99 aa11.14□□□□□ -0.63
Ctdsp1-201ENSMUST00000027367 Ryr1E9PZQ0 5035 aa11.11□□□□□ -0.63
Ctdsp1-201ENSMUST00000027367 Gm11939A2A592 99 aa11.11□□□□□ -0.63
Ctdsp1-201ENSMUST00000027367 Krtap19-5O08632 62 aa11.1□□□□□ -0.63
Ctdsp1-201ENSMUST00000027367 Fat3Q8BNA6 4555 aa11.08□□□□□ -0.64
Ctdsp1-201ENSMUST00000027367 2310079G19RikQ9D6L6 185 aa11.07□□□□□ -0.64
Ctdsp1-201ENSMUST00000027367 Dnah8Q91XQ0 4731 aa11.01□□□□□ -0.65
Ctdsp1-201ENSMUST00000027367 A930033H14RikG5E8X6 103 aa10.97□□□□□ -0.65
Ctdsp1-201ENSMUST00000027367 Gm3880A0A1B0GSB3 72 aa10.95□□□□□ -0.66
Ctdsp1-201ENSMUST00000027367 Abca13Q5SSE9 5034 aa10.94□□□□□ -0.66
Ctdsp1-201ENSMUST00000027367 Gm4491E0CX42 125 aa10.94□□□□□ -0.66
Ctdsp1-201ENSMUST00000027367 Gm9736A0A1W2P7N1 277 aa10.91□□□□□ -0.66
Ctdsp1-201ENSMUST00000027367 Gm20537G3UYK7 97 aa10.9□□□□□ -0.66
Ctdsp1-201ENSMUST00000027367 Mycbp2Q7TPH6 4711 aa10.88□□□□□ -0.67
Ctdsp1-201ENSMUST00000027367 4930507D05RikQ8C9C9 103 aa10.85□□□□□ -0.67
Ctdsp1-201ENSMUST00000027367 Gm5767A0A0J9YTU8 78 aa10.85□□□□□ -0.67
Ctdsp1-201ENSMUST00000027367 D6Ertd527eA0A0N4SWI3 464 aa10.79□□□□□ -0.68
Ctdsp1-201ENSMUST00000027367 CriptO70333 101 aa10.77□□□□□ -0.69
Ctdsp1-201ENSMUST00000027367 Prm2P07978 107 aa10.75□□□□□ -0.69
Ctdsp1-201ENSMUST00000027367 Gm5965D3Z724 196 aa10.73□□□□□ -0.69
Ctdsp1-201ENSMUST00000027367 Herc2Q4U2R1 4836 aa10.64□□□□□ -0.71
Ctdsp1-201ENSMUST00000027367 Kiaa1109A2AAE1 5005 aa10.62□□□□□ -0.71
Ctdsp1-201ENSMUST00000027367 Krtap15-1Q9QZU5 150 aa10.61□□□□□ -0.71
Ctdsp1-201ENSMUST00000027367 Dnhd1D3Z2X2 4750 aa10.6□□□□□ -0.71
Ctdsp1-201ENSMUST00000027367 Rpl37Q9D823 97 aa10.54□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 58 ms