RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Gm27235Q3UW50 83 aa11.72□□□□□ -0.53
Tram1-201ENSMUST00000027068 Ndufb1P0DN34 57 aa11.6□□□□□ -0.55
Tram1-201ENSMUST00000027068 Gm17349F7BGH6 99 aa11.56□□□□□ -0.56
Tram1-201ENSMUST00000027068 Adm2Q7TNK8 150 aa11.56□□□□□ -0.56
Tram1-201ENSMUST00000027068 Q8K1L6 76 aa11.56□□□□□ -0.56
Tram1-201ENSMUST00000027068 Huwe1Q7TMY8 4377 aaKnown RBP11.55□□□□□ -0.56
Tram1-201ENSMUST00000027068 Gm9507D3Z5T3 223 aa11.54□□□□□ -0.56
Tram1-201ENSMUST00000027068 AW011738F6S7Q2 159 aa11.53□□□□□ -0.56
Tram1-201ENSMUST00000027068 Defb10Q8R2I8 73 aa11.53□□□□□ -0.56
Tram1-201ENSMUST00000027068 Gm21798J3QNU5 87 aa11.52□□□□□ -0.57
Tram1-201ENSMUST00000027068 Dync2h1Q45VK7 4306 aa11.5□□□□□ -0.57
Tram1-201ENSMUST00000027068 2310034C09RikQ9D746 214 aa11.49□□□□□ -0.57
Tram1-201ENSMUST00000027068 Gm10065F6TJM2 114 aa11.49□□□□□ -0.57
Tram1-201ENSMUST00000027068 1600014C23RikQ9DAX4 101 aa11.48□□□□□ -0.57
Tram1-201ENSMUST00000027068 Krtap29-1A2A5X4 342 aa11.46□□□□□ -0.57
Tram1-201ENSMUST00000027068 Cypt14J3QPF7 87 aa11.46□□□□□ -0.57
Tram1-201ENSMUST00000027068 Gm12216A0A1W2P827 62 aa11.46□□□□□ -0.57
Tram1-201ENSMUST00000027068 Gm16253D3Z167 63 aa11.45□□□□□ -0.58
Tram1-201ENSMUST00000027068 Defb13Q8R2I4 64 aa11.45□□□□□ -0.58
Tram1-201ENSMUST00000027068 Gm4707V9GXN5 68 aa11.42□□□□□ -0.58
Tram1-201ENSMUST00000027068 NbdyA0A0N4SUI7 68 aa11.39□□□□□ -0.59
Tram1-201ENSMUST00000027068 Znf706Q9D115 76 aaKnown RBP11.39□□□□□ -0.59
Tram1-201ENSMUST00000027068 Dnah5Q8VHE6 4621 aa11.38□□□□□ -0.59
Tram1-201ENSMUST00000027068 Wfdc3Q14AE4 130 aa11.37□□□□□ -0.59
Tram1-201ENSMUST00000027068 PrkdcP97313 4128 aa11.37□□□□□ -0.59
Tram1-201ENSMUST00000027068 Defb39Q70KL3 74 aa11.36□□□□□ -0.59
Tram1-201ENSMUST00000027068 Dnah7cA0A087WR13 4024 aa11.35□□□□□ -0.59
Tram1-201ENSMUST00000027068 Fras1Q80T14 4010 aa11.35□□□□□ -0.59
Tram1-201ENSMUST00000027068 Krtap14O08640 167 aa11.3□□□□□ -0.6
Tram1-201ENSMUST00000027068 PlecQ9QXS1 4691 aaKnown RBP11.3□□□□□ -0.6
Tram1-201ENSMUST00000027068 Spaca4Q80ZQ0 127 aa11.29□□□□□ -0.6
Tram1-201ENSMUST00000027068 Cypt15B1AXS0 87 aa11.28□□□□□ -0.6
Tram1-201ENSMUST00000027068 Krtap10-4Q08EG8 221 aa11.28□□□□□ -0.6
Tram1-201ENSMUST00000027068 Limd2Q8BGB5 128 aa11.27□□□□□ -0.6
Tram1-201ENSMUST00000027068 Krtap13O88375 197 aa11.26□□□□□ -0.61
Tram1-201ENSMUST00000027068 Gm9918Q8BUR5 174 aa11.26□□□□□ -0.61
Tram1-201ENSMUST00000027068 Gm10999F6Q4M4 69 aa11.26□□□□□ -0.61
Tram1-201ENSMUST00000027068 Uqcr11Q9CPX8 56 aa11.22□□□□□ -0.61
Tram1-201ENSMUST00000027068 Q8BGJ3 129 aa11.22□□□□□ -0.61
Tram1-201ENSMUST00000027068 TnxbO35452 4006 aa11.22□□□□□ -0.61
Tram1-201ENSMUST00000027068 Tnp2P11378 117 aa11.22□□□□□ -0.61
Tram1-201ENSMUST00000027068 2310050C09RikG5E8Z3 280 aa11.21□□□□□ -0.62
Tram1-201ENSMUST00000027068 Defb1P56386 69 aa11.2□□□□□ -0.62
Tram1-201ENSMUST00000027068 Gpr15lA0A0B4J1N3 78 aa11.16□□□□□ -0.62
Tram1-201ENSMUST00000027068 Dnah7aE9Q0T8 4024 aa11.15□□□□□ -0.62
Tram1-201ENSMUST00000027068 Hectd4E9Q2E4 4418 aa11.14□□□□□ -0.63
Tram1-201ENSMUST00000027068 Stard9Q80TF6 4561 aa11.09□□□□□ -0.63
Tram1-201ENSMUST00000027068 Ly6g6cQ9Z1Q4 126 aa11.08□□□□□ -0.64
Tram1-201ENSMUST00000027068 FcgbpE9Q0B5 2583 aa11.02□□□□□ -0.64
Tram1-201ENSMUST00000027068 Vps13dB1ART2 4390 aa11.02□□□□□ -0.65
Tram1-201ENSMUST00000027068 Mp68P56379 58 aa11□□□□□ -0.65
Tram1-201ENSMUST00000027068 Dnah2P0C6F1 4456 aa11□□□□□ -0.65
Tram1-201ENSMUST00000027068 Gm20538F6Z9R1 75 aa10.98□□□□□ -0.65
Tram1-201ENSMUST00000027068 Krtap10-10A0A1W2P7T6 217 aa10.95□□□□□ -0.66
Tram1-201ENSMUST00000027068 Lrp1bQ9JI18 4599 aa10.94□□□□□ -0.66
Tram1-201ENSMUST00000027068 Pkd1O08852 4293 aa10.93□□□□□ -0.66
Tram1-201ENSMUST00000027068 2310079G19RikQ9D6L6 185 aa10.93□□□□□ -0.66
Tram1-201ENSMUST00000027068 Krtap3-2Q9D638 99 aa10.81□□□□□ -0.68
Tram1-201ENSMUST00000027068 Krtap3-3Q9D7P0 99 aa10.81□□□□□ -0.68
Tram1-201ENSMUST00000027068 Gm2696A0A1W2P709 240 aa10.81□□□□□ -0.68
Tram1-201ENSMUST00000027068 Pla2g10Q9QXX3 151 aa10.81□□□□□ -0.68
Tram1-201ENSMUST00000027068 CriptO70333 101 aa10.81□□□□□ -0.68
Tram1-201ENSMUST00000027068 Romo1P60603 79 aa10.77□□□□□ -0.69
Tram1-201ENSMUST00000027068 ApobE9Q414 4505 aa10.75□□□□□ -0.69
Tram1-201ENSMUST00000027068 4930507D05RikQ8C9C9 103 aa10.74□□□□□ -0.69
Tram1-201ENSMUST00000027068 Gm3880A0A1B0GSB3 72 aa10.72□□□□□ -0.69
Tram1-201ENSMUST00000027068 D6Ertd527eA0A0N4SWI3 464 aa10.72□□□□□ -0.69
Tram1-201ENSMUST00000027068 Pkhd1E9PZ36 4059 aa10.71□□□□□ -0.7
Tram1-201ENSMUST00000027068 Gm4491E0CX42 125 aa10.71□□□□□ -0.7
Tram1-201ENSMUST00000027068 Prm2P07978 107 aa10.68□□□□□ -0.7
Tram1-201ENSMUST00000027068 A930033H14RikG5E8X6 103 aa10.68□□□□□ -0.7
Tram1-201ENSMUST00000027068 Defb11Q8R2I7 77 aa10.66□□□□□ -0.7
Tram1-201ENSMUST00000027068 RetnlbQ99P86 105 aa10.57□□□□□ -0.72
Tram1-201ENSMUST00000027068 Gm20537G3UYK7 97 aa10.47□□□□□ -0.73
Tram1-201ENSMUST00000027068 Gm11939A2A592 99 aa10.47□□□□□ -0.73
Tram1-201ENSMUST00000027068 Fat2Q5F226 4351 aa10.46□□□□□ -0.73
Tram1-201ENSMUST00000027068 SacsQ9JLC8 4582 aa10.45□□□□□ -0.74
Tram1-201ENSMUST00000027068 Vps13bQ80TY5 3993 aa10.41□□□□□ -0.74
Tram1-201ENSMUST00000027068 Cox6b2Q80ZN9 88 aa10.36□□□□□ -0.75
Tram1-201ENSMUST00000027068 Fat1A0A1L1SQU7 4645 aa10.35□□□□□ -0.75
Tram1-201ENSMUST00000027068 Rps29P62274 56 aa10.24□□□□□ -0.77
Tram1-201ENSMUST00000027068 Dync1h1Q9JHU4 4644 aaKnown RBP10.21□□□□□ -0.77
Tram1-201ENSMUST00000027068 Lrp1Q91ZX7 4545 aaKnown RBP10.21□□□□□ -0.78
Tram1-201ENSMUST00000027068 Ndufaf8A2AMZ4 74 aa10.2□□□□□ -0.78
Tram1-201ENSMUST00000027068 Pkhd1l1Q80ZA4 4249 aa10.18□□□□□ -0.78
Tram1-201ENSMUST00000027068 Gm10382Q3V0T5 144 aa10.15□□□□□ -0.78
Tram1-201ENSMUST00000027068 Ryr3A2AGL3 4863 aa10.11□□□□□ -0.79
Tram1-201ENSMUST00000027068 Gm5767A0A0J9YTU8 78 aa10.09□□□□□ -0.79
Tram1-201ENSMUST00000027068 Gm9955Q8CEJ8 102 aa10.07□□□□□ -0.8
Tram1-201ENSMUST00000027068 Gm9736A0A1W2P7N1 277 aa10.05□□□□□ -0.8
Tram1-201ENSMUST00000027068 Gm17606F6ZL36 78 aa10.01□□□□□ -0.81
Tram1-201ENSMUST00000027068 Krtap15-1Q9QZU5 150 aa9.97□□□□□ -0.81
Tram1-201ENSMUST00000027068 Rnase13Q5GAM7 153 aa9.95□□□□□ -0.82
Tram1-201ENSMUST00000027068 Gm5965D3Z724 196 aa9.92□□□□□ -0.82
Tram1-201ENSMUST00000027068 Rpl37Q9D823 97 aa9.86□□□□□ -0.83
Tram1-201ENSMUST00000027068 Mycbp2Q7TPH6 4711 aa9.86□□□□□ -0.83
Tram1-201ENSMUST00000027068 Fat3Q8BNA6 4555 aa9.84□□□□□ -0.83
Tram1-201ENSMUST00000027068 Krtap19-5O08632 62 aa9.81□□□□□ -0.84
Tram1-201ENSMUST00000027068 Kmt2cQ8BRH4 4903 aa9.79□□□□□ -0.84
Tram1-201ENSMUST00000027068 Gm21887J3QQ04 176 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 10.1 ms