RNA–Protein interactions for RNA: ENSMUST00000024779.14

Usp49-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usp49, Length 8,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49-201ENSMUST00000024779 Chd9Q8BYH8 2885 aa9.15□□□□□ -0.94
Usp49-201ENSMUST00000024779 Myo15aQ9QZZ4 3511 aa9.15□□□□□ -0.95
Usp49-201ENSMUST00000024779 Adgrg4B7ZCC9 3073 aa9.14□□□□□ -0.95
Usp49-201ENSMUST00000024779 Gm40193A0A1B0GT39 78 aa9.14□□□□□ -0.95
Usp49-201ENSMUST00000024779 Brca2P97929 3329 aa9.13□□□□□ -0.95
Usp49-201ENSMUST00000024779 2310061N02RikQ9D6S9 174 aa9.12□□□□□ -0.95
Usp49-201ENSMUST00000024779 D6Ertd527eA0A0N4SWI3 464 aa9.12□□□□□ -0.95
Usp49-201ENSMUST00000024779 Krtap10-10A0A1W2P7T6 217 aa9.11□□□□□ -0.95
Usp49-201ENSMUST00000024779 Hivep1Q03172 2688 aa9.1□□□□□ -0.95
Usp49-201ENSMUST00000024779 NbeaQ9EPN1 2936 aa9.1□□□□□ -0.95
Usp49-201ENSMUST00000024779 Gm9112A2AI92 75 aa9.09□□□□□ -0.95
Usp49-201ENSMUST00000024779 TgO08710 2766 aa9.08□□□□□ -0.96
Usp49-201ENSMUST00000024779 Tenm1Q9WTS4 2731 aa9.06□□□□□ -0.96
Usp49-201ENSMUST00000024779 FlncQ8VHX6 2726 aaKnown RBP9.06□□□□□ -0.96
Usp49-201ENSMUST00000024779 Trank1Q8BV79 2999 aa9.06□□□□□ -0.96
Usp49-201ENSMUST00000024779 Szt2A2A9C3 3431 aa9.06□□□□□ -0.96
Usp49-201ENSMUST00000024779 Pdzd2E9Q1M1 2796 aa9.03□□□□□ -0.96
Usp49-201ENSMUST00000024779 Col6a3E9PWQ3 3284 aa9.02□□□□□ -0.97
Usp49-201ENSMUST00000024779 LrbaQ9ESE1 2856 aa9□□□□□ -0.97
Usp49-201ENSMUST00000024779 2310057N15RikQ9D6T8 200 aa9□□□□□ -0.97
Usp49-201ENSMUST00000024779 Dchs2A0A0A6YW72 3346 aa8.96□□□□□ -0.98
Usp49-201ENSMUST00000024779 Nf1Q04690 2841 aa8.93□□□□□ -0.98
Usp49-201ENSMUST00000024779 Gm5965D3Z724 196 aa8.92□□□□□ -0.98
Usp49-201ENSMUST00000024779 Akap9Q70FJ1 3797 aa8.92□□□□□ -0.98
Usp49-201ENSMUST00000024779 Gm2696A0A1W2P709 240 aa8.91□□□□□ -0.98
Usp49-201ENSMUST00000024779 SpegQ62407 3262 aa8.91□□□□□ -0.98
Usp49-201ENSMUST00000024779 Dchs1E9PVD3 3291 aa8.86□□□□□ -0.99
Usp49-201ENSMUST00000024779 Celsr2Q9R0M0 2920 aa8.85□□□□□ -0.99
Usp49-201ENSMUST00000024779 Vps13cQ8BX70 3748 aa8.84□□□□□ -0.99
Usp49-201ENSMUST00000024779 A930033H14RikG5E8X6 103 aa8.82□□□□□ -1
Usp49-201ENSMUST00000024779 Tenm4Q3UHK6 2771 aa8.79□□□□□ -1
Usp49-201ENSMUST00000024779 SmcpP15265 143 aa8.73□□□□□ -1.01
Usp49-201ENSMUST00000024779 B930094E09RikQ8C4T2 136 aa8.71□□□□□ -1.01
Usp49-201ENSMUST00000024779 VcanQ62059 3357 aa8.67□□□□□ -1.02
Usp49-201ENSMUST00000024779 Gm20537G3UYK7 97 aa8.66□□□□□ -1.02
Usp49-201ENSMUST00000024779 DmdP11531 3678 aa8.66□□□□□ -1.02
Usp49-201ENSMUST00000024779 Wdfy3Q6VNB8 3508 aa8.5□□□□□ -1.05
Usp49-201ENSMUST00000024779 Smg1Q8BKX6 3658 aaKnown RBP8.49□□□□□ -1.05
Usp49-201ENSMUST00000024779 Prm2P07978 107 aa8.48□□□□□ -1.05
Usp49-201ENSMUST00000024779 Tenm3Q9WTS6 2715 aa8.48□□□□□ -1.05
Usp49-201ENSMUST00000024779 OtogO55225 2910 aa8.45□□□□□ -1.06
Usp49-201ENSMUST00000024779 Megf8P60882 2789 aa8.4□□□□□ -1.06
Usp49-201ENSMUST00000024779 VwfQ8CIZ8 2813 aa8.38□□□□□ -1.07
Usp49-201ENSMUST00000024779 Csmd1Q923L3 3564 aa8.36□□□□□ -1.07
Usp49-201ENSMUST00000024779 Cmya5Q70KF4 3739 aa8.36□□□□□ -1.07
Usp49-201ENSMUST00000024779 Gm9918Q8BUR5 174 aa8.34□□□□□ -1.08
Usp49-201ENSMUST00000024779 4933428G20RikQ9D3X4 101 aa8.33□□□□□ -1.08
Usp49-201ENSMUST00000024779 Gm17416Q30KP4 66 aa8.32□□□□□ -1.08
Usp49-201ENSMUST00000024779 Gm17402F6Z0L5 76 aa8.3□□□□□ -1.08
Usp49-201ENSMUST00000024779 Zfhx4Q9JJN2 3550 aa8.28□□□□□ -1.08
Usp49-201ENSMUST00000024779 RelnQ60841 3461 aa8.28□□□□□ -1.08
Usp49-201ENSMUST00000024779 Muc5acE9QAQ8 3455 aa8.27□□□□□ -1.08
Usp49-201ENSMUST00000024779 SpenQ62504 3644 aaKnown RBP8.25□□□□□ -1.09
Usp49-201ENSMUST00000024779 2310079G19RikQ9D6L6 185 aa8.23□□□□□ -1.09
Usp49-201ENSMUST00000024779 Helz2E9QAM5 2947 aaKnown RBP8.22□□□□□ -1.09
Usp49-201ENSMUST00000024779 Tenm2Q9WTS5 2764 aa8.2□□□□□ -1.1
Usp49-201ENSMUST00000024779 Ank2Q8C8R3 3898 aa8.18□□□□□ -1.1
Usp49-201ENSMUST00000024779 2210017I01RikA0A0A6YVV1 95 aa8.16□□□□□ -1.1
Usp49-201ENSMUST00000024779 Lama5Q61001 3718 aa8.13□□□□□ -1.11
Usp49-201ENSMUST00000024779 Gm19668J3QMD1 248 aa8.1□□□□□ -1.11
Usp49-201ENSMUST00000024779 Gm9736A0A1W2P7N1 277 aa8.08□□□□□ -1.12
Usp49-201ENSMUST00000024779 Csmd2V9GX34 3611 aa8.05□□□□□ -1.12
Usp49-201ENSMUST00000024779 Col7a1Q63870 2944 aa7.96□□□□□ -1.13
Usp49-201ENSMUST00000024779 Fbn1Q61554 2873 aaKnown RBP7.87□□□□□ -1.15
Usp49-201ENSMUST00000024779 Gm884A2A9H6 3643 aa7.86□□□□□ -1.15
Usp49-201ENSMUST00000024779 Gm10318A0A1W2P728 225 aa7.8□□□□□ -1.16
Usp49-201ENSMUST00000024779 Krtap13-1Q8K198 168 aa7.67□□□□□ -1.18
Usp49-201ENSMUST00000024779 Crct1Q6PAI5 102 aa7.67□□□□□ -1.18
Usp49-201ENSMUST00000024779 Gm6358A0A087WPH4 74 aa7.56□□□□□ -1.2
Usp49-201ENSMUST00000024779 Krtap19-5O08632 62 aa7.53□□□□□ -1.2
Usp49-201ENSMUST00000024779 LystP97412 3788 aa7.49□□□□□ -1.21
Usp49-201ENSMUST00000024779 Gm11939A2A592 99 aa7.49□□□□□ -1.21
Usp49-201ENSMUST00000024779 BsnO88737 3942 aa7.45□□□□□ -1.22
Usp49-201ENSMUST00000024779 Svep1A2AVA0 3567 aa7.44□□□□□ -1.22
Usp49-201ENSMUST00000024779 Muc6Q80T03 2850 aa7.44□□□□□ -1.22
Usp49-201ENSMUST00000024779 Csmd3Q80T79 3707 aa7.41□□□□□ -1.22
Usp49-201ENSMUST00000024779 Muc4Q8JZM8 3443 aa7.38□□□□□ -1.23
Usp49-201ENSMUST00000024779 Sprr2kO70562 68 aa7.35□□□□□ -1.23
Usp49-201ENSMUST00000024779 Krtap3-1A2A591 98 aa7.34□□□□□ -1.24
Usp49-201ENSMUST00000024779 Hspg2Q05793 3707 aaKnown RBP7.31□□□□□ -1.24
Usp49-201ENSMUST00000024779 Xirp2Q4U4S6 3784 aa7.3□□□□□ -1.24
Usp49-201ENSMUST00000024779 Krtap8-1O08633 61 aa7.27□□□□□ -1.25
Usp49-201ENSMUST00000024779 CubnQ9JLB4 3623 aa7.27□□□□□ -1.25
Usp49-201ENSMUST00000024779 Krtap19-9aF8WH65 55 aa7.14□□□□□ -1.27
Usp49-201ENSMUST00000024779 Krtap7-1Q9D3I6 87 aa7.13□□□□□ -1.27
Usp49-201ENSMUST00000024779 Krtap3-2Q9D638 99 aa7.07□□□□□ -1.28
Usp49-201ENSMUST00000024779 Krtap3-3Q9D7P0 99 aa7.07□□□□□ -1.28
Usp49-201ENSMUST00000024779 Sprr2gO70558 76 aa7.06□□□□□ -1.28
Usp49-201ENSMUST00000024779 Huwe1Q7TMY8 4377 aaKnown RBP7.05□□□□□ -1.28
Usp49-201ENSMUST00000024779 Gm18596A0A1W2P860 280 aa7.04□□□□□ -1.28
Usp49-201ENSMUST00000024779 Krtap1-5A2A590 122 aa6.93□□□□□ -1.3
Usp49-201ENSMUST00000024779 Krtap19-9bQ99NG9 58 aa6.93□□□□□ -1.3
Usp49-201ENSMUST00000024779 Sprr2a3Q4KL71 83 aa6.91□□□□□ -1.3
Usp49-201ENSMUST00000024779 Sprr2a1Q9CQK8 83 aa6.91□□□□□ -1.3
Usp49-201ENSMUST00000024779 Gm19402J3QJV4 266 aa6.86□□□□□ -1.31
Usp49-201ENSMUST00000024779 Dnah7bL7N1Y0 4068 aa6.86□□□□□ -1.31
Usp49-201ENSMUST00000024779 Dnah3Q8BW94 4083 aa6.76□□□□□ -1.33
Usp49-201ENSMUST00000024779 Krtap1-4Q3V2D6 188 aa6.76□□□□□ -1.33
Usp49-201ENSMUST00000024779 LorP18165 486 aa6.74□□□□□ -1.33
Usp49-201ENSMUST00000024779 Krtap12-1Q9Z287 130 aa6.73□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 74.1 ms