RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 CubnQ9JLB4 3623 aa8.45□□□□□ -1.06
Trim27-201ENSMUST00000021761 Gm37013Q8K491 104 aa8.44□□□□□ -1.06
Trim27-201ENSMUST00000021761 VwfQ8CIZ8 2813 aa8.42□□□□□ -1.06
Trim27-201ENSMUST00000021761 Gm17606F6ZL36 78 aa8.41□□□□□ -1.06
Trim27-201ENSMUST00000021761 Gm10643Q3URG9 111 aa8.4□□□□□ -1.07
Trim27-201ENSMUST00000021761 Krtap13O88375 197 aa8.39□□□□□ -1.07
Trim27-201ENSMUST00000021761 Krtap10-4Q08EG8 221 aa8.38□□□□□ -1.07
Trim27-201ENSMUST00000021761 2310061N02RikQ9D6S9 174 aa8.37□□□□□ -1.07
Trim27-201ENSMUST00000021761 Col7a1Q63870 2944 aa8.36□□□□□ -1.07
Trim27-201ENSMUST00000021761 Gm16253D3Z167 63 aa8.34□□□□□ -1.07
Trim27-201ENSMUST00000021761 Gm3646F6S692 53 aa8.34□□□□□ -1.08
Trim27-201ENSMUST00000021761 Gm12216A0A1W2P827 62 aa8.33□□□□□ -1.08
Trim27-201ENSMUST00000021761 LystP97412 3788 aa8.32□□□□□ -1.08
Trim27-201ENSMUST00000021761 4933415A04RikQ9D443 101 aa8.3□□□□□ -1.08
Trim27-201ENSMUST00000021761 Gm26620Q9CY65 116 aa8.29□□□□□ -1.08
Trim27-201ENSMUST00000021761 Gm2310J3QNJ2 377 aa8.25□□□□□ -1.09
Trim27-201ENSMUST00000021761 Gm3880A0A1B0GSB3 72 aa8.24□□□□□ -1.09
Trim27-201ENSMUST00000021761 Krtap29-1A2A5X4 342 aa8.21□□□□□ -1.09
Trim27-201ENSMUST00000021761 Krtap10-10A0A1W2P7T6 217 aa8.2□□□□□ -1.1
Trim27-201ENSMUST00000021761 Rnase13Q5GAM7 153 aa8.2□□□□□ -1.1
Trim27-201ENSMUST00000021761 Gm4491E0CX42 125 aa8.2□□□□□ -1.1
Trim27-201ENSMUST00000021761 Krtap14O08640 167 aa8.19□□□□□ -1.1
Trim27-201ENSMUST00000021761 2310050C09RikG5E8Z3 280 aa8.19□□□□□ -1.1
Trim27-201ENSMUST00000021761 Tenm2Q9WTS5 2764 aa8.13□□□□□ -1.11
Trim27-201ENSMUST00000021761 1700042G07RikB1AUF7 90 aa8.13□□□□□ -1.11
Trim27-201ENSMUST00000021761 CriptO70333 101 aa8.11□□□□□ -1.11
Trim27-201ENSMUST00000021761 Gm9821Q8K076 103 aa8.09□□□□□ -1.11
Trim27-201ENSMUST00000021761 OxtP35454 125 aa8.08□□□□□ -1.12
Trim27-201ENSMUST00000021761 Muc6Q80T03 2850 aa8.01□□□□□ -1.13
Trim27-201ENSMUST00000021761 Gm2696A0A1W2P709 240 aa8□□□□□ -1.13
Trim27-201ENSMUST00000021761 Megf8P60882 2789 aa7.98□□□□□ -1.13
Trim27-201ENSMUST00000021761 Mp68P56379 58 aa7.98□□□□□ -1.13
Trim27-201ENSMUST00000021761 Ank2Q8C8R3 3898 aa7.98□□□□□ -1.13
Trim27-201ENSMUST00000021761 Krtap15-1Q9QZU5 150 aa7.97□□□□□ -1.13
Trim27-201ENSMUST00000021761 Tnp2P11378 117 aa7.96□□□□□ -1.14
Trim27-201ENSMUST00000021761 Gm9955Q8CEJ8 102 aa7.89□□□□□ -1.15
Trim27-201ENSMUST00000021761 Xirp2Q4U4S6 3784 aa7.83□□□□□ -1.16
Trim27-201ENSMUST00000021761 D6Ertd527eA0A0N4SWI3 464 aa7.76□□□□□ -1.17
Trim27-201ENSMUST00000021761 Gm5767A0A0J9YTU8 78 aa7.75□□□□□ -1.17
Trim27-201ENSMUST00000021761 Hspg2Q05793 3707 aaKnown RBP7.72□□□□□ -1.17
Trim27-201ENSMUST00000021761 Rpl37Q9D823 97 aa7.7□□□□□ -1.18
Trim27-201ENSMUST00000021761 Cox6b2Q80ZN9 88 aa7.69□□□□□ -1.18
Trim27-201ENSMUST00000021761 Gm10382Q3V0T5 144 aa7.66□□□□□ -1.18
Trim27-201ENSMUST00000021761 Csmd3Q80T79 3707 aa7.66□□□□□ -1.18
Trim27-201ENSMUST00000021761 Spink7Q6IE32 76 aa7.64□□□□□ -1.19
Trim27-201ENSMUST00000021761 Romo1P60603 79 aa7.61□□□□□ -1.19
Trim27-201ENSMUST00000021761 BsnO88737 3942 aa7.58□□□□□ -1.2
Trim27-201ENSMUST00000021761 2310079G19RikQ9D6L6 185 aa7.52□□□□□ -1.21
Trim27-201ENSMUST00000021761 Gm5965D3Z724 196 aa7.52□□□□□ -1.21
Trim27-201ENSMUST00000021761 Pla2g10Q9QXX3 151 aa7.51□□□□□ -1.21
Trim27-201ENSMUST00000021761 Gm20537G3UYK7 97 aa7.49□□□□□ -1.21
Trim27-201ENSMUST00000021761 Rps29P62274 56 aa7.48□□□□□ -1.21
Trim27-201ENSMUST00000021761 Gm20538F6Z9R1 75 aa7.46□□□□□ -1.21
Trim27-201ENSMUST00000021761 BC029722A0A0N4SW31 51 aa7.43□□□□□ -1.22
Trim27-201ENSMUST00000021761 Gm9918Q8BUR5 174 aa7.43□□□□□ -1.22
Trim27-201ENSMUST00000021761 Dnah14A0A140LIJ4 4489 aa7.43□□□□□ -1.22
Trim27-201ENSMUST00000021761 Gm19426M0QWC7 77 aa7.39□□□□□ -1.23
Trim27-201ENSMUST00000021761 A930033H14RikG5E8X6 103 aa7.38□□□□□ -1.23
Trim27-201ENSMUST00000021761 Gm9736A0A1W2P7N1 277 aa7.33□□□□□ -1.24
Trim27-201ENSMUST00000021761 Fam229aB2KGE5 128 aa7.29□□□□□ -1.24
Trim27-201ENSMUST00000021761 Dnah10D3YYQ8 4591 aa7.29□□□□□ -1.24
Trim27-201ENSMUST00000021761 Sec61bQ9CQS8 96 aaKnown RBP7.28□□□□□ -1.24
Trim27-201ENSMUST00000021761 Camk2n1Q6QWF9 78 aa7.27□□□□□ -1.25
Trim27-201ENSMUST00000021761 2310057N15RikQ9D6T8 200 aa7.25□□□□□ -1.25
Trim27-201ENSMUST00000021761 Gm11939A2A592 99 aa7.18□□□□□ -1.26
Trim27-201ENSMUST00000021761 Ndufaf8A2AMZ4 74 aa7.17□□□□□ -1.26
Trim27-201ENSMUST00000021761 Dnah7bL7N1Y0 4068 aa7.17□□□□□ -1.26
Trim27-201ENSMUST00000021761 Krtap3-2Q9D638 99 aa7.14□□□□□ -1.27
Trim27-201ENSMUST00000021761 Krtap3-3Q9D7P0 99 aa7.14□□□□□ -1.27
Trim27-201ENSMUST00000021761 Gm21887J3QQ04 176 aa7.09□□□□□ -1.27
Trim27-201ENSMUST00000021761 Huwe1Q7TMY8 4377 aaKnown RBP7.04□□□□□ -1.28
Trim27-201ENSMUST00000021761 B930094E09RikQ8C4T2 136 aa6.99□□□□□ -1.29
Trim27-201ENSMUST00000021761 Prm2P07978 107 aa6.93□□□□□ -1.3
Trim27-201ENSMUST00000021761 Dnah11E9Q7N9 4488 aa6.92□□□□□ -1.3
Trim27-201ENSMUST00000021761 Gm10318A0A1W2P728 225 aa6.92□□□□□ -1.3
Trim27-201ENSMUST00000021761 Gm17416Q30KP4 66 aa6.92□□□□□ -1.3
Trim27-201ENSMUST00000021761 Krtap19-5O08632 62 aa6.91□□□□□ -1.3
Trim27-201ENSMUST00000021761 Dnah5Q8VHE6 4621 aa6.9□□□□□ -1.3
Trim27-201ENSMUST00000021761 Dnah17Q69Z23 4481 aa6.88□□□□□ -1.31
Trim27-201ENSMUST00000021761 PlecQ9QXS1 4691 aaKnown RBP6.88□□□□□ -1.31
Trim27-201ENSMUST00000021761 2210017I01RikA0A0A6YVV1 95 aa6.87□□□□□ -1.31
Trim27-201ENSMUST00000021761 Dnah9B1AR51 4484 aa6.83□□□□□ -1.32
Trim27-201ENSMUST00000021761 Kmt2aP55200 3966 aa6.75□□□□□ -1.33
Trim27-201ENSMUST00000021761 Gm9112A2AI92 75 aa6.73□□□□□ -1.33
Trim27-201ENSMUST00000021761 Krtap3-1A2A591 98 aa6.72□□□□□ -1.33
Trim27-201ENSMUST00000021761 Lrp1bQ9JI18 4599 aa6.72□□□□□ -1.33
Trim27-201ENSMUST00000021761 Crct1Q6PAI5 102 aa6.72□□□□□ -1.33
Trim27-201ENSMUST00000021761 Krtap13-1Q8K198 168 aa6.7□□□□□ -1.34
Trim27-201ENSMUST00000021761 Vps13dB1ART2 4390 aa6.69□□□□□ -1.34
Trim27-201ENSMUST00000021761 Stard9Q80TF6 4561 aa6.67□□□□□ -1.34
Trim27-201ENSMUST00000021761 Gm40193A0A1B0GT39 78 aa6.67□□□□□ -1.34
Trim27-201ENSMUST00000021761 PrkdcP97313 4128 aa6.66□□□□□ -1.34
Trim27-201ENSMUST00000021761 Dnah3Q8BW94 4083 aa6.58□□□□□ -1.36
Trim27-201ENSMUST00000021761 Dnah6E9Q0B6 4144 aa6.58□□□□□ -1.36
Trim27-201ENSMUST00000021761 Tnp1P10856 55 aa6.57□□□□□ -1.36
Trim27-201ENSMUST00000021761 ApobE9Q414 4505 aa6.57□□□□□ -1.36
Trim27-201ENSMUST00000021761 Hectd4E9Q2E4 4418 aa6.54□□□□□ -1.36
Trim27-201ENSMUST00000021761 Dnah2P0C6F1 4456 aa6.52□□□□□ -1.37
Trim27-201ENSMUST00000021761 Ryr1E9PZQ0 5035 aa6.52□□□□□ -1.37
Trim27-201ENSMUST00000021761 Dnah1E9Q8T7 4250 aa6.51□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms