RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Rnase13Q5GAM7 153 aa5.83□□□□□ -1.48
Ctc1-201ENSMUST00000021278 Sprr4Q8CGN8 76 aa5.83□□□□□ -1.48
Ctc1-201ENSMUST00000021278 Defb39Q70KL3 74 aa5.8□□□□□ -1.48
Ctc1-201ENSMUST00000021278 Xirp2Q4U4S6 3784 aa5.79□□□□□ -1.48
Ctc1-201ENSMUST00000021278 Ndufaf8A2AMZ4 74 aa5.78□□□□□ -1.48
Ctc1-201ENSMUST00000021278 Gm11627A6PWP4 55 aa5.75□□□□□ -1.49
Ctc1-201ENSMUST00000021278 Gm27235Q3UW50 83 aa5.75□□□□□ -1.49
Ctc1-201ENSMUST00000021278 Snhg11Q4G0K9 87 aa5.75□□□□□ -1.49
Ctc1-201ENSMUST00000021278 Gm10642Q3TWM1 71 aa5.73□□□□□ -1.49
Ctc1-201ENSMUST00000021278 Gm17606F6ZL36 78 aa5.72□□□□□ -1.49
Ctc1-201ENSMUST00000021278 Psors1c2Q80ZC9 134 aa5.72□□□□□ -1.49
Ctc1-201ENSMUST00000021278 TgO08710 2766 aa5.69□□□□□ -1.5
Ctc1-201ENSMUST00000021278 Stab2Q8R4U0 2559 aa5.69□□□□□ -1.5
Ctc1-201ENSMUST00000021278 Gm17349F7BGH6 99 aa5.68□□□□□ -1.5
Ctc1-201ENSMUST00000021278 Hspg2Q05793 3707 aaKnown RBP5.68□□□□□ -1.5
Ctc1-201ENSMUST00000021278 4930507D05RikQ8C9C9 103 aa5.68□□□□□ -1.5
Ctc1-201ENSMUST00000021278 Q8K1L6 76 aa5.66□□□□□ -1.5
Ctc1-201ENSMUST00000021278 Anapc11Q9CPX9 84 aa5.66□□□□□ -1.5
Ctc1-201ENSMUST00000021278 Gm21887J3QQ04 176 aa5.63□□□□□ -1.51
Ctc1-201ENSMUST00000021278 Plac8Q9JI48 112 aa5.63□□□□□ -1.51
Ctc1-201ENSMUST00000021278 Adm2Q7TNK8 150 aa5.63□□□□□ -1.51
Ctc1-201ENSMUST00000021278 Spaca4Q80ZQ0 127 aa5.62□□□□□ -1.51
Ctc1-201ENSMUST00000021278 Gm4491E0CX42 125 aa5.62□□□□□ -1.51
Ctc1-201ENSMUST00000021278 Gm9112A2AI92 75 aa5.59□□□□□ -1.51
Ctc1-201ENSMUST00000021278 Krtap14O08640 167 aa5.58□□□□□ -1.52
Ctc1-201ENSMUST00000021278 Nupr2Q497P3 102 aa5.58□□□□□ -1.52
Ctc1-201ENSMUST00000021278 Dnah10D3YYQ8 4591 aa5.58□□□□□ -1.52
Ctc1-201ENSMUST00000021278 Gpr15lA0A0B4J1N3 78 aa5.57□□□□□ -1.52
Ctc1-201ENSMUST00000021278 Gm9508A0A1W2P7W0 230 aa5.56□□□□□ -1.52
Ctc1-201ENSMUST00000021278 Gm2310J3QNJ2 377 aa5.56□□□□□ -1.52
Ctc1-201ENSMUST00000021278 Ly6g6cQ9Z1Q4 126 aa5.55□□□□□ -1.52
Ctc1-201ENSMUST00000021278 1600014C23RikQ9DAX4 101 aa5.54□□□□□ -1.52
Ctc1-201ENSMUST00000021278 Gm9507D3Z5T3 223 aa5.49□□□□□ -1.53
Ctc1-201ENSMUST00000021278 Gm10382Q3V0T5 144 aa5.48□□□□□ -1.53
Ctc1-201ENSMUST00000021278 Sec61bQ9CQS8 96 aaKnown RBP5.48□□□□□ -1.53
Ctc1-201ENSMUST00000021278 Gm10139O88245 57 aa5.48□□□□□ -1.53
Ctc1-201ENSMUST00000021278 AW011738F6S7Q2 159 aa5.47□□□□□ -1.53
Ctc1-201ENSMUST00000021278 Dnah14A0A140LIJ4 4489 aa5.45□□□□□ -1.54
Ctc1-201ENSMUST00000021278 Dnah6E9Q0B6 4144 aa5.41□□□□□ -1.54
Ctc1-201ENSMUST00000021278 Gm9955Q8CEJ8 102 aa5.41□□□□□ -1.54
Ctc1-201ENSMUST00000021278 Rpl37Q9D823 97 aa5.38□□□□□ -1.55
Ctc1-201ENSMUST00000021278 Sprr1aQ62266 144 aa5.37□□□□□ -1.55
Ctc1-201ENSMUST00000021278 Ryr1E9PZQ0 5035 aa5.37□□□□□ -1.55
Ctc1-201ENSMUST00000021278 Gm20537G3UYK7 97 aa5.34□□□□□ -1.55
Ctc1-201ENSMUST00000021278 Gm16253D3Z167 63 aa5.31□□□□□ -1.56
Ctc1-201ENSMUST00000021278 Fras1Q80T14 4010 aa5.31□□□□□ -1.56
Ctc1-201ENSMUST00000021278 PrkdcP97313 4128 aa5.31□□□□□ -1.56
Ctc1-201ENSMUST00000021278 2310050C09RikG5E8Z3 280 aa5.3□□□□□ -1.56
Ctc1-201ENSMUST00000021278 Ryr3A2AGL3 4863 aa5.3□□□□□ -1.56
Ctc1-201ENSMUST00000021278 Krtap10-4Q08EG8 221 aa5.3□□□□□ -1.56
Ctc1-201ENSMUST00000021278 PlecQ9QXS1 4691 aaKnown RBP5.28□□□□□ -1.56
Ctc1-201ENSMUST00000021278 Huwe1Q7TMY8 4377 aaKnown RBP5.27□□□□□ -1.57
Ctc1-201ENSMUST00000021278 Gm5965D3Z724 196 aa5.26□□□□□ -1.57
Ctc1-201ENSMUST00000021278 Krtap13O88375 197 aa5.26□□□□□ -1.57
Ctc1-201ENSMUST00000021278 2310057N15RikQ9D6T8 200 aa5.25□□□□□ -1.57
Ctc1-201ENSMUST00000021278 Csmd3Q80T79 3707 aa5.25□□□□□ -1.57
Ctc1-201ENSMUST00000021278 Gm9918Q8BUR5 174 aa5.23□□□□□ -1.57
Ctc1-201ENSMUST00000021278 Fam229aB2KGE5 128 aa5.21□□□□□ -1.57
Ctc1-201ENSMUST00000021278 D6Ertd527eA0A0N4SWI3 464 aa5.2□□□□□ -1.58
Ctc1-201ENSMUST00000021278 Gm2696A0A1W2P709 240 aa5.19□□□□□ -1.58
Ctc1-201ENSMUST00000021278 Gm10065F6TJM2 114 aa5.18□□□□□ -1.58
Ctc1-201ENSMUST00000021278 Krtap15-1Q9QZU5 150 aa5.18□□□□□ -1.58
Ctc1-201ENSMUST00000021278 Cox6b2Q80ZN9 88 aa5.15□□□□□ -1.59
Ctc1-201ENSMUST00000021278 Ryr2E9Q401 4966 aaKnown RBP5.14□□□□□ -1.59
Ctc1-201ENSMUST00000021278 Krtap29-1A2A5X4 342 aa5.12□□□□□ -1.59
Ctc1-201ENSMUST00000021278 Gm19426M0QWC7 77 aa5.11□□□□□ -1.59
Ctc1-201ENSMUST00000021278 NbdyA0A0N4SUI7 68 aa5.1□□□□□ -1.59
Ctc1-201ENSMUST00000021278 Stard9Q80TF6 4561 aa5.09□□□□□ -1.59
Ctc1-201ENSMUST00000021278 2310079G19RikQ9D6L6 185 aa5.06□□□□□ -1.6
Ctc1-201ENSMUST00000021278 Tnp2P11378 117 aa5.05□□□□□ -1.6
Ctc1-201ENSMUST00000021278 2310061N02RikQ9D6S9 174 aa5.05□□□□□ -1.6
Ctc1-201ENSMUST00000021278 Kmt2aP55200 3966 aa5.05□□□□□ -1.6
Ctc1-201ENSMUST00000021278 Dync2h1Q45VK7 4306 aa5.05□□□□□ -1.6
Ctc1-201ENSMUST00000021278 Dnah7aE9Q0T8 4024 aa5.03□□□□□ -1.6
Ctc1-201ENSMUST00000021278 Dnah7bL7N1Y0 4068 aa5.01□□□□□ -1.61
Ctc1-201ENSMUST00000021278 Dnah3Q8BW94 4083 aa5.01□□□□□ -1.61
Ctc1-201ENSMUST00000021278 Dnah17Q69Z23 4481 aa5□□□□□ -1.61
Ctc1-201ENSMUST00000021278 Camk2n1Q6QWF9 78 aa4.98□□□□□ -1.61
Ctc1-201ENSMUST00000021278 Herc2Q4U2R1 4836 aa4.97□□□□□ -1.61
Ctc1-201ENSMUST00000021278 Dnah7cA0A087WR13 4024 aa4.93□□□□□ -1.62
Ctc1-201ENSMUST00000021278 Vps13dB1ART2 4390 aa4.92□□□□□ -1.62
Ctc1-201ENSMUST00000021278 SacsQ9JLC8 4582 aa4.92□□□□□ -1.62
Ctc1-201ENSMUST00000021278 Dnah9B1AR51 4484 aa4.91□□□□□ -1.62
Ctc1-201ENSMUST00000021278 Dync1h1Q9JHU4 4644 aaKnown RBP4.9□□□□□ -1.63
Ctc1-201ENSMUST00000021278 Kiaa1109A2AAE1 5005 aa4.89□□□□□ -1.63
Ctc1-201ENSMUST00000021278 Spink7Q6IE32 76 aa4.87□□□□□ -1.63
Ctc1-201ENSMUST00000021278 Dnah11E9Q7N9 4488 aa4.85□□□□□ -1.63
Ctc1-201ENSMUST00000021278 Gm18596A0A1W2P860 280 aa4.85□□□□□ -1.63
Ctc1-201ENSMUST00000021278 Lce1mQ9CR91 182 aa4.84□□□□□ -1.64
Ctc1-201ENSMUST00000021278 Fat1A0A1L1SQU7 4645 aa4.83□□□□□ -1.64
Ctc1-201ENSMUST00000021278 Dnah1E9Q8T7 4250 aa4.83□□□□□ -1.64
Ctc1-201ENSMUST00000021278 Birc6O88738 4882 aa4.83□□□□□ -1.64
Ctc1-201ENSMUST00000021278 A930033H14RikG5E8X6 103 aa4.83□□□□□ -1.64
Ctc1-201ENSMUST00000021278 Gm40193A0A1B0GT39 78 aa4.82□□□□□ -1.64
Ctc1-201ENSMUST00000021278 Dnah5Q8VHE6 4621 aa4.82□□□□□ -1.64
Ctc1-201ENSMUST00000021278 Dnah2P0C6F1 4456 aa4.82□□□□□ -1.64
Ctc1-201ENSMUST00000021278 PcloQ9QYX7 5068 aa4.81□□□□□ -1.64
Ctc1-201ENSMUST00000021278 Pkd1O08852 4293 aa4.8□□□□□ -1.64
Ctc1-201ENSMUST00000021278 HydinQ80W93 5154 aa4.79□□□□□ -1.64
Ctc1-201ENSMUST00000021278 BC029722A0A0N4SW31 51 aa4.75□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms