RNA–Protein interactions for RNA: ENSMUST00000015981.11

Sqstm1-201, Transcript of Sequestosome-1, mousemouse

TSL 1 (best) BASIC

Gene Sqstm1, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-201ENSMUST00000015981 Dnah9B1AR51 4484 aa10.52□□□□□ -0.73
Sqstm1-201ENSMUST00000015981 Defb13Q8R2I4 64 aa10.51□□□□□ -0.73
Sqstm1-201ENSMUST00000015981 Anapc11Q9CPX9 84 aa10.51□□□□□ -0.73
Sqstm1-201ENSMUST00000015981 Nupr2Q497P3 102 aa10.5□□□□□ -0.73
Sqstm1-201ENSMUST00000015981 Znf706Q9D115 76 aaKnown RBP10.49□□□□□ -0.73
Sqstm1-201ENSMUST00000015981 AW011738F6S7Q2 159 aa10.48□□□□□ -0.73
Sqstm1-201ENSMUST00000015981 Gm10065F6TJM2 114 aa10.45□□□□□ -0.74
Sqstm1-201ENSMUST00000015981 Dnah6E9Q0B6 4144 aa10.42□□□□□ -0.74
Sqstm1-201ENSMUST00000015981 Igsf10Q3V1M1 2594 aa10.42□□□□□ -0.74
Sqstm1-201ENSMUST00000015981 Q8BGJ3 129 aa10.4□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Krtap29-1A2A5X4 342 aa10.39□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Gm10999F6Q4M4 69 aa10.39□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Adm2Q7TNK8 150 aa10.38□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 2310034C09RikQ9D746 214 aa10.38□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Cypt15B1AXS0 87 aa10.37□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Muc6Q80T03 2850 aa10.36□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Stab2Q8R4U0 2559 aa10.35□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 NbdyA0A0N4SUI7 68 aa10.34□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Defb39Q70KL3 74 aa10.34□□□□□ -0.75
Sqstm1-201ENSMUST00000015981 Wfdc17Q5SSJ1 76 aa10.31□□□□□ -0.76
Sqstm1-201ENSMUST00000015981 Pkd1l1Q8R526 2615 aa10.31□□□□□ -0.76
Sqstm1-201ENSMUST00000015981 Dync2h1Q45VK7 4306 aa10.27□□□□□ -0.76
Sqstm1-201ENSMUST00000015981 Defb1P56386 69 aa10.27□□□□□ -0.77
Sqstm1-201ENSMUST00000015981 Pla2g10Q9QXX3 151 aa10.25□□□□□ -0.77
Sqstm1-201ENSMUST00000015981 Wfdc3Q14AE4 130 aa10.21□□□□□ -0.77
Sqstm1-201ENSMUST00000015981 2310079G19RikQ9D6L6 185 aa10.21□□□□□ -0.77
Sqstm1-201ENSMUST00000015981 Gm12216A0A1W2P827 62 aa10.2□□□□□ -0.78
Sqstm1-201ENSMUST00000015981 Defb10Q8R2I8 73 aa10.2□□□□□ -0.78
Sqstm1-201ENSMUST00000015981 Tnp2P11378 117 aa10.2□□□□□ -0.78
Sqstm1-201ENSMUST00000015981 Spaca4Q80ZQ0 127 aa10.19□□□□□ -0.78
Sqstm1-201ENSMUST00000015981 1600014C23RikQ9DAX4 101 aa10.18□□□□□ -0.78
Sqstm1-201ENSMUST00000015981 Huwe1Q7TMY8 4377 aaKnown RBP10.16□□□□□ -0.78
Sqstm1-201ENSMUST00000015981 Krtap14O08640 167 aa10.15□□□□□ -0.78
Sqstm1-201ENSMUST00000015981 2310050C09RikG5E8Z3 280 aa10.14□□□□□ -0.79
Sqstm1-201ENSMUST00000015981 Gpr15lA0A0B4J1N3 78 aa10.1□□□□□ -0.79
Sqstm1-201ENSMUST00000015981 Hectd4E9Q2E4 4418 aa10.07□□□□□ -0.8
Sqstm1-201ENSMUST00000015981 Gm17349F7BGH6 99 aa10.05□□□□□ -0.8
Sqstm1-201ENSMUST00000015981 4930507D05RikQ8C9C9 103 aa10.03□□□□□ -0.8
Sqstm1-201ENSMUST00000015981 Krtap13O88375 197 aa10.02□□□□□ -0.8
Sqstm1-201ENSMUST00000015981 Fras1Q80T14 4010 aa10.02□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 TnxbO35452 4006 aa10.01□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 Dnah5Q8VHE6 4621 aa10□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 Krtap3-2Q9D638 99 aa10□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 Krtap3-3Q9D7P0 99 aa10□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 Dnah7cA0A087WR13 4024 aa9.99□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 A930033H14RikG5E8X6 103 aa9.98□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 D6Ertd527eA0A0N4SWI3 464 aa9.97□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 Gm9507D3Z5T3 223 aa9.97□□□□□ -0.81
Sqstm1-201ENSMUST00000015981 PlecQ9QXS1 4691 aaKnown RBP9.96□□□□□ -0.82
Sqstm1-201ENSMUST00000015981 PrkdcP97313 4128 aa9.92□□□□□ -0.82
Sqstm1-201ENSMUST00000015981 Dnah2P0C6F1 4456 aa9.9□□□□□ -0.82
Sqstm1-201ENSMUST00000015981 Gm20537G3UYK7 97 aa9.87□□□□□ -0.83
Sqstm1-201ENSMUST00000015981 Dnah7aE9Q0T8 4024 aa9.86□□□□□ -0.83
Sqstm1-201ENSMUST00000015981 Gm3880A0A1B0GSB3 72 aa9.86□□□□□ -0.83
Sqstm1-201ENSMUST00000015981 Vps13dB1ART2 4390 aa9.85□□□□□ -0.83
Sqstm1-201ENSMUST00000015981 Gm9918Q8BUR5 174 aa9.84□□□□□ -0.83
Sqstm1-201ENSMUST00000015981 Gm4491E0CX42 125 aa9.84□□□□□ -0.83
Sqstm1-201ENSMUST00000015981 Stard9Q80TF6 4561 aa9.82□□□□□ -0.84
Sqstm1-201ENSMUST00000015981 FcgbpE9Q0B5 2583 aa9.75□□□□□ -0.85
Sqstm1-201ENSMUST00000015981 Lrp1bQ9JI18 4599 aa9.73□□□□□ -0.85
Sqstm1-201ENSMUST00000015981 Gm20538F6Z9R1 75 aa9.72□□□□□ -0.85
Sqstm1-201ENSMUST00000015981 Krtap10-4Q08EG8 221 aa9.72□□□□□ -0.85
Sqstm1-201ENSMUST00000015981 Romo1P60603 79 aa9.7□□□□□ -0.86
Sqstm1-201ENSMUST00000015981 Mp68P56379 58 aa9.7□□□□□ -0.86
Sqstm1-201ENSMUST00000015981 Pkd1O08852 4293 aa9.69□□□□□ -0.86
Sqstm1-201ENSMUST00000015981 Cox6b2Q80ZN9 88 aa9.68□□□□□ -0.86
Sqstm1-201ENSMUST00000015981 ApobE9Q414 4505 aa9.65□□□□□ -0.86
Sqstm1-201ENSMUST00000015981 Ly6g6cQ9Z1Q4 126 aa9.65□□□□□ -0.87
Sqstm1-201ENSMUST00000015981 CriptO70333 101 aa9.6□□□□□ -0.87
Sqstm1-201ENSMUST00000015981 Pkhd1E9PZ36 4059 aa9.54□□□□□ -0.88
Sqstm1-201ENSMUST00000015981 Gm11939A2A592 99 aa9.52□□□□□ -0.88
Sqstm1-201ENSMUST00000015981 Defb11Q8R2I7 77 aa9.5□□□□□ -0.89
Sqstm1-201ENSMUST00000015981 Gm9955Q8CEJ8 102 aa9.49□□□□□ -0.89
Sqstm1-201ENSMUST00000015981 Rps29P62274 56 aa9.45□□□□□ -0.9
Sqstm1-201ENSMUST00000015981 Krtap10-10A0A1W2P7T6 217 aa9.43□□□□□ -0.9
Sqstm1-201ENSMUST00000015981 SacsQ9JLC8 4582 aa9.42□□□□□ -0.9
Sqstm1-201ENSMUST00000015981 Gm10382Q3V0T5 144 aa9.36□□□□□ -0.91
Sqstm1-201ENSMUST00000015981 Fat2Q5F226 4351 aa9.33□□□□□ -0.92
Sqstm1-201ENSMUST00000015981 Rpl37Q9D823 97 aa9.32□□□□□ -0.92
Sqstm1-201ENSMUST00000015981 Gm2696A0A1W2P709 240 aa9.31□□□□□ -0.92
Sqstm1-201ENSMUST00000015981 Gm17606F6ZL36 78 aa9.28□□□□□ -0.92
Sqstm1-201ENSMUST00000015981 RetnlbQ99P86 105 aa9.23□□□□□ -0.93
Sqstm1-201ENSMUST00000015981 Vps13bQ80TY5 3993 aa9.22□□□□□ -0.93
Sqstm1-201ENSMUST00000015981 Gm5767A0A0J9YTU8 78 aa9.16□□□□□ -0.94
Sqstm1-201ENSMUST00000015981 Rnase13Q5GAM7 153 aa9.13□□□□□ -0.95
Sqstm1-201ENSMUST00000015981 Pkhd1l1Q80ZA4 4249 aa9.11□□□□□ -0.95
Sqstm1-201ENSMUST00000015981 Fat1A0A1L1SQU7 4645 aa9.09□□□□□ -0.95
Sqstm1-201ENSMUST00000015981 Gm21887J3QQ04 176 aa9.04□□□□□ -0.96
Sqstm1-201ENSMUST00000015981 Lrp1Q91ZX7 4545 aaKnown RBP9.02□□□□□ -0.97
Sqstm1-201ENSMUST00000015981 Ryr3A2AGL3 4863 aa8.96□□□□□ -0.97
Sqstm1-201ENSMUST00000015981 Ndufaf8A2AMZ4 74 aa8.96□□□□□ -0.97
Sqstm1-201ENSMUST00000015981 Dync1h1Q9JHU4 4644 aaKnown RBP8.95□□□□□ -0.98
Sqstm1-201ENSMUST00000015981 Krtap3-1A2A591 98 aa8.95□□□□□ -0.98
Sqstm1-201ENSMUST00000015981 Prm2P07978 107 aa8.94□□□□□ -0.98
Sqstm1-201ENSMUST00000015981 Krtap15-1Q9QZU5 150 aa8.88□□□□□ -0.99
Sqstm1-201ENSMUST00000015981 Gm19426M0QWC7 77 aa8.87□□□□□ -0.99
Sqstm1-201ENSMUST00000015981 Gm17416Q30KP4 66 aa8.82□□□□□ -1
Sqstm1-201ENSMUST00000015981 Fat3Q8BNA6 4555 aa8.82□□□□□ -1
Sqstm1-201ENSMUST00000015981 B930094E09RikQ8C4T2 136 aa8.79□□□□□ -1
Sqstm1-201ENSMUST00000015981 Gm5965D3Z724 196 aa8.75□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms