RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Dnah14A0A140LIJ4 4489 aa7.21□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Gm16253D3Z167 63 aa7.2□□□□□ -1.26
Rfx1-201ENSMUST00000005600 1600014C23RikQ9DAX4 101 aa7.2□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Gm9821Q8K076 103 aa7.2□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Gm21798J3QNU5 87 aa7.2□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Dnah17Q69Z23 4481 aa7.19□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Krtap29-1A2A5X4 342 aa7.19□□□□□ -1.26
Rfx1-201ENSMUST00000005600 NbdyA0A0N4SUI7 68 aa7.18□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Uqcr11Q9CPX8 56 aa7.17□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Megf8P60882 2789 aa7.17□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Dnah10D3YYQ8 4591 aa7.17□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Defb39Q70KL3 74 aa7.16□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Tenm2Q9WTS5 2764 aa7.15□□□□□ -1.26
Rfx1-201ENSMUST00000005600 Gm17349F7BGH6 99 aa7.15□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Dnah1E9Q8T7 4250 aa7.14□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Cypt15B1AXS0 87 aa7.13□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Defb11Q8R2I7 77 aa7.12□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Muc6Q80T03 2850 aa7.11□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Wfdc3Q14AE4 130 aa7.11□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Gm10999F6Q4M4 69 aa7.1□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Ly6g6cQ9Z1Q4 126 aa7.1□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Csmd3Q80T79 3707 aa7.09□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Spaca4Q80ZQ0 127 aa7.09□□□□□ -1.27
Rfx1-201ENSMUST00000005600 Gpr15lA0A0B4J1N3 78 aa7.05□□□□□ -1.28
Rfx1-201ENSMUST00000005600 Dnah11E9Q7N9 4488 aa7.04□□□□□ -1.28
Rfx1-201ENSMUST00000005600 Gm9507D3Z5T3 223 aa7.04□□□□□ -1.28
Rfx1-201ENSMUST00000005600 Tnp2P11378 117 aa7.03□□□□□ -1.28
Rfx1-201ENSMUST00000005600 Q8BGJ3 129 aa7.02□□□□□ -1.29
Rfx1-201ENSMUST00000005600 Dnah6E9Q0B6 4144 aa7.02□□□□□ -1.29
Rfx1-201ENSMUST00000005600 Krtap14O08640 167 aa7.02□□□□□ -1.29
Rfx1-201ENSMUST00000005600 FcgbpE9Q0B5 2583 aa7.02□□□□□ -1.29
Rfx1-201ENSMUST00000005600 Gm12216A0A1W2P827 62 aa7□□□□□ -1.29
Rfx1-201ENSMUST00000005600 Defb1P56386 69 aa6.99□□□□□ -1.29
Rfx1-201ENSMUST00000005600 2310034C09RikQ9D746 214 aa6.99□□□□□ -1.29
Rfx1-201ENSMUST00000005600 2310050C09RikG5E8Z3 280 aa6.97□□□□□ -1.29
Rfx1-201ENSMUST00000005600 Dnah9B1AR51 4484 aa6.96□□□□□ -1.3
Rfx1-201ENSMUST00000005600 Huwe1Q7TMY8 4377 aaKnown RBP6.92□□□□□ -1.3
Rfx1-201ENSMUST00000005600 Krtap13O88375 197 aa6.92□□□□□ -1.3
Rfx1-201ENSMUST00000005600 4930507D05RikQ8C9C9 103 aa6.88□□□□□ -1.31
Rfx1-201ENSMUST00000005600 Krtap10-4Q08EG8 221 aa6.86□□□□□ -1.31
Rfx1-201ENSMUST00000005600 Dync2h1Q45VK7 4306 aa6.85□□□□□ -1.31
Rfx1-201ENSMUST00000005600 Gm9918Q8BUR5 174 aa6.83□□□□□ -1.32
Rfx1-201ENSMUST00000005600 2310079G19RikQ9D6L6 185 aa6.81□□□□□ -1.32
Rfx1-201ENSMUST00000005600 PlecQ9QXS1 4691 aaKnown RBP6.78□□□□□ -1.32
Rfx1-201ENSMUST00000005600 TnxbO35452 4006 aa6.75□□□□□ -1.33
Rfx1-201ENSMUST00000005600 Gm4491E0CX42 125 aa6.74□□□□□ -1.33
Rfx1-201ENSMUST00000005600 Mp68P56379 58 aa6.74□□□□□ -1.33
Rfx1-201ENSMUST00000005600 PrkdcP97313 4128 aa6.73□□□□□ -1.33
Rfx1-201ENSMUST00000005600 D6Ertd527eA0A0N4SWI3 464 aa6.72□□□□□ -1.33
Rfx1-201ENSMUST00000005600 Fras1Q80T14 4010 aa6.71□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Gm20538F6Z9R1 75 aa6.71□□□□□ -1.34
Rfx1-201ENSMUST00000005600 A930033H14RikG5E8X6 103 aa6.71□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Pla2g10Q9QXX3 151 aa6.69□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Dnah5Q8VHE6 4621 aa6.69□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Krtap3-2Q9D638 99 aa6.67□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Krtap3-3Q9D7P0 99 aa6.67□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Krtap10-10A0A1W2P7T6 217 aa6.67□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Dnah7cA0A087WR13 4024 aa6.65□□□□□ -1.34
Rfx1-201ENSMUST00000005600 Hectd4E9Q2E4 4418 aa6.62□□□□□ -1.35
Rfx1-201ENSMUST00000005600 RetnlbQ99P86 105 aa6.61□□□□□ -1.35
Rfx1-201ENSMUST00000005600 Gm3880A0A1B0GSB3 72 aa6.61□□□□□ -1.35
Rfx1-201ENSMUST00000005600 Gm2696A0A1W2P709 240 aa6.59□□□□□ -1.35
Rfx1-201ENSMUST00000005600 CriptO70333 101 aa6.58□□□□□ -1.36
Rfx1-201ENSMUST00000005600 Romo1P60603 79 aa6.57□□□□□ -1.36
Rfx1-201ENSMUST00000005600 Dnah2P0C6F1 4456 aa6.56□□□□□ -1.36
Rfx1-201ENSMUST00000005600 Rps29P62274 56 aa6.55□□□□□ -1.36
Rfx1-201ENSMUST00000005600 Cox6b2Q80ZN9 88 aa6.54□□□□□ -1.36
Rfx1-201ENSMUST00000005600 Gm20537G3UYK7 97 aa6.54□□□□□ -1.36
Rfx1-201ENSMUST00000005600 Stard9Q80TF6 4561 aa6.52□□□□□ -1.37
Rfx1-201ENSMUST00000005600 Lrp1bQ9JI18 4599 aa6.52□□□□□ -1.37
Rfx1-201ENSMUST00000005600 Vps13dB1ART2 4390 aa6.51□□□□□ -1.37
Rfx1-201ENSMUST00000005600 Dnah7aE9Q0T8 4024 aa6.48□□□□□ -1.37
Rfx1-201ENSMUST00000005600 Gm11939A2A592 99 aa6.47□□□□□ -1.37
Rfx1-201ENSMUST00000005600 Pkd1O08852 4293 aa6.45□□□□□ -1.38
Rfx1-201ENSMUST00000005600 Gm9955Q8CEJ8 102 aa6.45□□□□□ -1.38
Rfx1-201ENSMUST00000005600 ApobE9Q414 4505 aa6.44□□□□□ -1.38
Rfx1-201ENSMUST00000005600 Gm17606F6ZL36 78 aa6.44□□□□□ -1.38
Rfx1-201ENSMUST00000005600 Gm5767A0A0J9YTU8 78 aa6.4□□□□□ -1.39
Rfx1-201ENSMUST00000005600 Prm2P07978 107 aa6.39□□□□□ -1.39
Rfx1-201ENSMUST00000005600 Gm10382Q3V0T5 144 aa6.35□□□□□ -1.39
Rfx1-201ENSMUST00000005600 Rnase13Q5GAM7 153 aa6.34□□□□□ -1.39
Rfx1-201ENSMUST00000005600 SacsQ9JLC8 4582 aa6.3□□□□□ -1.4
Rfx1-201ENSMUST00000005600 Rpl37Q9D823 97 aa6.28□□□□□ -1.4
Rfx1-201ENSMUST00000005600 Pkhd1E9PZ36 4059 aa6.27□□□□□ -1.41
Rfx1-201ENSMUST00000005600 Krtap15-1Q9QZU5 150 aa6.26□□□□□ -1.41
Rfx1-201ENSMUST00000005600 Fat2Q5F226 4351 aa6.25□□□□□ -1.41
Rfx1-201ENSMUST00000005600 Ndufaf8A2AMZ4 74 aa6.21□□□□□ -1.42
Rfx1-201ENSMUST00000005600 Fat1A0A1L1SQU7 4645 aa6.18□□□□□ -1.42
Rfx1-201ENSMUST00000005600 Dync1h1Q9JHU4 4644 aaKnown RBP6.17□□□□□ -1.42
Rfx1-201ENSMUST00000005600 Gm5965D3Z724 196 aa6.14□□□□□ -1.43
Rfx1-201ENSMUST00000005600 Gm9736A0A1W2P7N1 277 aa6.12□□□□□ -1.43
Rfx1-201ENSMUST00000005600 Vps13bQ80TY5 3993 aa6.11□□□□□ -1.43
Rfx1-201ENSMUST00000005600 Lrp1Q91ZX7 4545 aaKnown RBP6.07□□□□□ -1.44
Rfx1-201ENSMUST00000005600 Gm17416Q30KP4 66 aa6.06□□□□□ -1.44
Rfx1-201ENSMUST00000005600 Krtap19-5O08632 62 aa6.05□□□□□ -1.44
Rfx1-201ENSMUST00000005600 Krtap3-1A2A591 98 aa6.04□□□□□ -1.44
Rfx1-201ENSMUST00000005600 Pkhd1l1Q80ZA4 4249 aa6.02□□□□□ -1.45
Rfx1-201ENSMUST00000005600 Gm19426M0QWC7 77 aa6.01□□□□□ -1.45
Rfx1-201ENSMUST00000005600 Gm21887J3QQ04 176 aa6□□□□□ -1.45
Rfx1-201ENSMUST00000005600 Ryr3A2AGL3 4863 aa5.98□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 63.8 ms