RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Igfn1Q3KNY0 2849 aa7.84□□□□□ -1.15
Col1a1-201ENSMUST00000001547 Zzef1Q5SSH7 2924 aa7.82□□□□□ -1.16
Col1a1-201ENSMUST00000001547 Gm9112A2AI92 75 aa7.82□□□□□ -1.16
Col1a1-201ENSMUST00000001547 FcgbpE9Q0B5 2583 aa7.82□□□□□ -1.16
Col1a1-201ENSMUST00000001547 Gm21887J3QQ04 176 aa7.81□□□□□ -1.16
Col1a1-201ENSMUST00000001547 TgO08710 2766 aa7.79□□□□□ -1.16
Col1a1-201ENSMUST00000001547 Dchs2A0A0A6YW72 3346 aa7.76□□□□□ -1.17
Col1a1-201ENSMUST00000001547 Tenm4Q3UHK6 2771 aa7.75□□□□□ -1.17
Col1a1-201ENSMUST00000001547 FlncQ8VHX6 2726 aaKnown RBP7.75□□□□□ -1.17
Col1a1-201ENSMUST00000001547 D6Ertd527eA0A0N4SWI3 464 aa7.74□□□□□ -1.17
Col1a1-201ENSMUST00000001547 DspE9Q557 2883 aaKnown RBP7.74□□□□□ -1.17
Col1a1-201ENSMUST00000001547 Srrm2Q8BTI8 2703 aaKnown RBP7.72□□□□□ -1.17
Col1a1-201ENSMUST00000001547 Col6a3E9PWQ3 3284 aa7.71□□□□□ -1.18
Col1a1-201ENSMUST00000001547 Zfhx3Q61329 3726 aa7.7□□□□□ -1.18
Col1a1-201ENSMUST00000001547 ApcQ61315 2845 aa7.7□□□□□ -1.18
Col1a1-201ENSMUST00000001547 Tnp1P10856 55 aa7.68□□□□□ -1.18
Col1a1-201ENSMUST00000001547 Celsr2Q9R0M0 2920 aa7.66□□□□□ -1.18
Col1a1-201ENSMUST00000001547 VcanQ62059 3357 aa7.64□□□□□ -1.19
Col1a1-201ENSMUST00000001547 Tenm3Q9WTS6 2715 aa7.63□□□□□ -1.19
Col1a1-201ENSMUST00000001547 Trank1Q8BV79 2999 aa7.61□□□□□ -1.19
Col1a1-201ENSMUST00000001547 Gm5965D3Z724 196 aa7.6□□□□□ -1.19
Col1a1-201ENSMUST00000001547 Gm40193A0A1B0GT39 78 aa7.58□□□□□ -1.2
Col1a1-201ENSMUST00000001547 Chd9Q8BYH8 2885 aa7.57□□□□□ -1.2
Col1a1-201ENSMUST00000001547 Wdfy3Q6VNB8 3508 aa7.56□□□□□ -1.2
Col1a1-201ENSMUST00000001547 Dchs1E9PVD3 3291 aa7.54□□□□□ -1.2
Col1a1-201ENSMUST00000001547 Pdzd2E9Q1M1 2796 aa7.54□□□□□ -1.2
Col1a1-201ENSMUST00000001547 RelnQ60841 3461 aa7.49□□□□□ -1.21
Col1a1-201ENSMUST00000001547 Vps13cQ8BX70 3748 aa7.49□□□□□ -1.21
Col1a1-201ENSMUST00000001547 Myo15aQ9QZZ4 3511 aa7.48□□□□□ -1.21
Col1a1-201ENSMUST00000001547 2310057N15RikQ9D6T8 200 aa7.47□□□□□ -1.21
Col1a1-201ENSMUST00000001547 Nf1Q04690 2841 aa7.46□□□□□ -1.21
Col1a1-201ENSMUST00000001547 LrbaQ9ESE1 2856 aa7.39□□□□□ -1.23
Col1a1-201ENSMUST00000001547 Akap9Q70FJ1 3797 aa7.39□□□□□ -1.23
Col1a1-201ENSMUST00000001547 SpegQ62407 3262 aa7.38□□□□□ -1.23
Col1a1-201ENSMUST00000001547 Gm20537G3UYK7 97 aa7.37□□□□□ -1.23
Col1a1-201ENSMUST00000001547 A930033H14RikG5E8X6 103 aa7.31□□□□□ -1.24
Col1a1-201ENSMUST00000001547 DmdP11531 3678 aa7.29□□□□□ -1.24
Col1a1-201ENSMUST00000001547 B930094E09RikQ8C4T2 136 aa7.27□□□□□ -1.25
Col1a1-201ENSMUST00000001547 Helz2E9QAM5 2947 aaKnown RBP7.25□□□□□ -1.25
Col1a1-201ENSMUST00000001547 Muc5acE9QAQ8 3455 aa7.24□□□□□ -1.25
Col1a1-201ENSMUST00000001547 2310079G19RikQ9D6L6 185 aa7.24□□□□□ -1.25
Col1a1-201ENSMUST00000001547 Tenm1Q9WTS4 2731 aa7.19□□□□□ -1.26
Col1a1-201ENSMUST00000001547 Tenm2Q9WTS5 2764 aa7.18□□□□□ -1.26
Col1a1-201ENSMUST00000001547 Gm9736A0A1W2P7N1 277 aa7.17□□□□□ -1.26
Col1a1-201ENSMUST00000001547 Prm2P07978 107 aa7.16□□□□□ -1.26
Col1a1-201ENSMUST00000001547 Gm17416Q30KP4 66 aa7.13□□□□□ -1.27
Col1a1-201ENSMUST00000001547 OtogO55225 2910 aa7.08□□□□□ -1.28
Col1a1-201ENSMUST00000001547 Csmd1Q923L3 3564 aa7.08□□□□□ -1.28
Col1a1-201ENSMUST00000001547 Lama5Q61001 3718 aa7.03□□□□□ -1.28
Col1a1-201ENSMUST00000001547 Smg1Q8BKX6 3658 aaKnown RBP7.03□□□□□ -1.28
Col1a1-201ENSMUST00000001547 2210017I01RikA0A0A6YVV1 95 aa7□□□□□ -1.29
Col1a1-201ENSMUST00000001547 Gm9918Q8BUR5 174 aa6.97□□□□□ -1.29
Col1a1-201ENSMUST00000001547 Zfhx4Q9JJN2 3550 aa6.96□□□□□ -1.29
Col1a1-201ENSMUST00000001547 Fbn1Q61554 2873 aaKnown RBP6.92□□□□□ -1.3
Col1a1-201ENSMUST00000001547 VwfQ8CIZ8 2813 aa6.89□□□□□ -1.31
Col1a1-201ENSMUST00000001547 SpenQ62504 3644 aaKnown RBP6.88□□□□□ -1.31
Col1a1-201ENSMUST00000001547 Gm11939A2A592 99 aa6.87□□□□□ -1.31
Col1a1-201ENSMUST00000001547 Gm17402F6Z0L5 76 aa6.85□□□□□ -1.31
Col1a1-201ENSMUST00000001547 Ank2Q8C8R3 3898 aa6.85□□□□□ -1.31
Col1a1-201ENSMUST00000001547 Gm884A2A9H6 3643 aa6.85□□□□□ -1.31
Col1a1-201ENSMUST00000001547 Krtap19-5O08632 62 aa6.84□□□□□ -1.32
Col1a1-201ENSMUST00000001547 4933428G20RikQ9D3X4 101 aa6.78□□□□□ -1.32
Col1a1-201ENSMUST00000001547 Megf8P60882 2789 aa6.73□□□□□ -1.33
Col1a1-201ENSMUST00000001547 Gm10318A0A1W2P728 225 aa6.73□□□□□ -1.33
Col1a1-201ENSMUST00000001547 Gm19668J3QMD1 248 aa6.67□□□□□ -1.34
Col1a1-201ENSMUST00000001547 Krtap13-1Q8K198 168 aa6.67□□□□□ -1.34
Col1a1-201ENSMUST00000001547 Cmya5Q70KF4 3739 aa6.64□□□□□ -1.35
Col1a1-201ENSMUST00000001547 Krtap3-2Q9D638 99 aa6.64□□□□□ -1.35
Col1a1-201ENSMUST00000001547 Krtap3-3Q9D7P0 99 aa6.64□□□□□ -1.35
Col1a1-201ENSMUST00000001547 Svep1A2AVA0 3567 aa6.63□□□□□ -1.35
Col1a1-201ENSMUST00000001547 Crct1Q6PAI5 102 aa6.61□□□□□ -1.35
Col1a1-201ENSMUST00000001547 Col7a1Q63870 2944 aa6.58□□□□□ -1.36
Col1a1-201ENSMUST00000001547 Krtap3-1A2A591 98 aa6.55□□□□□ -1.36
Col1a1-201ENSMUST00000001547 Dnah14A0A140LIJ4 4489 aa6.47□□□□□ -1.37
Col1a1-201ENSMUST00000001547 Muc6Q80T03 2850 aa6.46□□□□□ -1.38
Col1a1-201ENSMUST00000001547 Csmd2V9GX34 3611 aa6.43□□□□□ -1.38
Col1a1-201ENSMUST00000001547 Huwe1Q7TMY8 4377 aaKnown RBP6.43□□□□□ -1.38
Col1a1-201ENSMUST00000001547 Muc4Q8JZM8 3443 aa6.39□□□□□ -1.39
Col1a1-201ENSMUST00000001547 LystP97412 3788 aa6.26□□□□□ -1.41
Col1a1-201ENSMUST00000001547 Dnah10D3YYQ8 4591 aa6.25□□□□□ -1.41
Col1a1-201ENSMUST00000001547 Gm6358A0A087WPH4 74 aa6.23□□□□□ -1.41
Col1a1-201ENSMUST00000001547 Dnah5Q8VHE6 4621 aa6.22□□□□□ -1.41
Col1a1-201ENSMUST00000001547 Krtap1-5A2A590 122 aa6.17□□□□□ -1.42
Col1a1-201ENSMUST00000001547 Dnah17Q69Z23 4481 aa6.14□□□□□ -1.43
Col1a1-201ENSMUST00000001547 Vps13dB1ART2 4390 aa6.14□□□□□ -1.43
Col1a1-201ENSMUST00000001547 Stard9Q80TF6 4561 aa6.11□□□□□ -1.43
Col1a1-201ENSMUST00000001547 PlecQ9QXS1 4691 aaKnown RBP6.09□□□□□ -1.43
Col1a1-201ENSMUST00000001547 Sprr2a3Q4KL71 83 aa6.06□□□□□ -1.44
Col1a1-201ENSMUST00000001547 Sprr2a1Q9CQK8 83 aa6.06□□□□□ -1.44
Col1a1-201ENSMUST00000001547 Gm18596A0A1W2P860 280 aa6.02□□□□□ -1.45
Col1a1-201ENSMUST00000001547 Krtap19-9aF8WH65 55 aa6.02□□□□□ -1.45
Col1a1-201ENSMUST00000001547 BsnO88737 3942 aa5.99□□□□□ -1.45
Col1a1-201ENSMUST00000001547 Krtap1-4Q3V2D6 188 aa5.98□□□□□ -1.45
Col1a1-201ENSMUST00000001547 CubnQ9JLB4 3623 aa5.97□□□□□ -1.45
Col1a1-201ENSMUST00000001547 Krtap7-1Q9D3I6 87 aa5.96□□□□□ -1.46
Col1a1-201ENSMUST00000001547 LorP18165 486 aa5.95□□□□□ -1.46
Col1a1-201ENSMUST00000001547 Dnah11E9Q7N9 4488 aa5.92□□□□□ -1.46
Col1a1-201ENSMUST00000001547 Xirp2Q4U4S6 3784 aa5.91□□□□□ -1.46
Col1a1-201ENSMUST00000001547 Hspg2Q05793 3707 aaKnown RBP5.9□□□□□ -1.46
Col1a1-201ENSMUST00000001547 Dync2h1Q45VK7 4306 aa5.9□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 160.9 ms