RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Krtap13O88375 197 aa4.53□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Myo18bE9PV66 2605 aa4.53□□□□□ -1.68
Pcdh9-204ENSMUST00000193901 Hectd1Q69ZR2 2618 aaKnown RBP4.52□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 CenpfE9Q3P4 2997 aaKnown RBP4.52□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Gm3250E9Q1M3 230 aa4.51□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Dmbt1Q60997 2085 aa4.51□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Itpr1P11881 2749 aa4.5□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Cystm1Q8K353 104 aa4.5□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 HrnrQ8VHD8 2496 aa4.5□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Rps29P62274 56 aa4.49□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Nbeal1E9PYP2 2688 aa4.48□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Usp34Q6ZQ93 3582 aa4.47□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Ankrd17Q99NH0 2603 aaKnown RBP4.47□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Lelp1Q9DAE3 120 aa4.47□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Fn1P11276 2477 aaKnown RBP4.47□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Dnah12Q3V0Q1 3086 aa4.47□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 Gm17349F7BGH6 99 aa4.47□□□□□ -1.69
Pcdh9-204ENSMUST00000193901 HttP42859 3119 aa4.46□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 Gm2310J3QNJ2 377 aa4.44□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 Krtap14O08640 167 aa4.44□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 A730071L15RikQ8C4X0 137 aa4.44□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 Cep350E9Q309 3095 aa4.43□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 Usp24B1AY13 2617 aaKnown RBP4.43□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 Alms1Q8K4E0 3251 aa4.43□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 FasnP19096 2504 aaKnown RBP4.42□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 Krtap29-1A2A5X4 342 aa4.41□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 Chd7A2AJK6 2986 aaKnown RBP4.4□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 CicQ924A2 2510 aa4.4□□□□□ -1.7
Pcdh9-204ENSMUST00000193901 TrioQ0KL02 3102 aa4.36□□□□□ -1.71
Pcdh9-204ENSMUST00000193901 FlnaQ8BTM8 2647 aaKnown RBP4.35□□□□□ -1.71
Pcdh9-204ENSMUST00000193901 AtrQ9JKK8 2635 aa4.34□□□□□ -1.71
Pcdh9-204ENSMUST00000193901 Gm7173A0A0G2JEB6 3132 aa4.33□□□□□ -1.72
Pcdh9-204ENSMUST00000193901 Zfhx3Q61329 3726 aa4.33□□□□□ -1.72
Pcdh9-204ENSMUST00000193901 Prune2Q52KR3 3084 aa4.31□□□□□ -1.72
Pcdh9-204ENSMUST00000193901 D6Ertd527eA0A0N4SWI3 464 aa4.3□□□□□ -1.72
Pcdh9-204ENSMUST00000193901 Gm5965D3Z724 196 aa4.29□□□□□ -1.72
Pcdh9-204ENSMUST00000193901 Akap13E9Q394 2776 aa4.28□□□□□ -1.72
Pcdh9-204ENSMUST00000193901 Lama3Q61789 3330 aa4.28□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Rev3lQ61493 3122 aa4.26□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Gm9195A0A140LHT4 2805 aa4.26□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Col12a1Q60847 3120 aa4.26□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 KalrnA2CG49 2964 aa4.25□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 2310057N15RikQ9D6T8 200 aa4.25□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Mast4Q811L6 2618 aa4.24□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Nsd1O88491 2588 aaKnown RBP4.24□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Gm9508A0A1W2P7W0 230 aa4.24□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Gcn1E9PVA8 2671 aaKnown RBP4.23□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Fbn2Q61555 2907 aa4.23□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 MgaA2AWL7 3003 aaKnown RBP4.23□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 SmcpP15265 143 aa4.23□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 4933428G20RikQ9D3X4 101 aa4.22□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Gm3233E9Q2H5 230 aa4.22□□□□□ -1.73
Pcdh9-204ENSMUST00000193901 Mki67E9PVX6 3177 aaKnown RBP4.2□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Gm7138L7N2C3 230 aa4.2□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Gm3238W4VSP7 230 aa4.2□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Dmxl1Q6PNC0 3013 aa4.2□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Kmt2bO08550 2713 aa4.2□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Stab1Q8R4Y4 2571 aa4.2□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Prm2P07978 107 aa4.19□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Muc2Q80Z19 2680 aa4.19□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 A0A1Y7VLE6 161 aa4.18□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Itpr3P70227 2670 aa4.18□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Map1aQ9QYR6 2776 aa4.17□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 NipblQ6KCD5 2798 aaKnown RBP4.15□□□□□ -1.74
Pcdh9-204ENSMUST00000193901 Igsf10Q3V1M1 2594 aa4.15□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 B930094E09RikQ8C4T2 136 aa4.15□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 Wdfy3Q6VNB8 3508 aa4.14□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 Tnp2P11378 117 aa4.14□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 Tep1P97499 2629 aa4.13□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 Notch1Q01705 2531 aa4.11□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 Gm7137J3QMW1 236 aa4.1□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 Cdh23Q99PF4 3354 aa4.09□□□□□ -1.75
Pcdh9-204ENSMUST00000193901 Gm20537G3UYK7 97 aa4.07□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 AspmQ8CJ27 3122 aa4.06□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 Col6a5A6H584 2640 aa4.06□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 9530053A07RikE9PVG8 2581 aa4.05□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 Gm17402F6Z0L5 76 aa4.04□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 Hivep1Q03172 2688 aa4.04□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 Szt2A2A9C3 3431 aa4.04□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 Chd6A3KFM7 2711 aa4.03□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 Ubr5Q80TP3 2792 aa4.03□□□□□ -1.76
Pcdh9-204ENSMUST00000193901 Prrc2cQ3TLH4 2846 aaKnown RBP4.02□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Bod1lE9Q6J5 3032 aa4.02□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Ash1lQ99MY8 2958 aa4.01□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Wdfy4E9Q2M9 3149 aa4.01□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 FryE9Q8I9 3020 aa4.01□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 DspE9Q557 2883 aaKnown RBP4.01□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 NbeaQ9EPN1 2936 aa4□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Jbts17Q8CE72 3214 aa3.99□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Lrrc37aB1AWG4 3215 aa3.99□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 DmdP11531 3678 aa3.99□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Unc80Q8BLN6 3261 aa3.98□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Itpr2Q9Z329 2701 aa3.97□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 FlncQ8VHX6 2726 aaKnown RBP3.97□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Gm36176A0A1W2P8D5 158 aa3.97□□□□□ -1.77
Pcdh9-204ENSMUST00000193901 Csmd2V9GX34 3611 aa3.96□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Vps13aQ5H8C4 3166 aa3.96□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 2310061N02RikQ9D6S9 174 aa3.96□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Tenm4Q3UHK6 2771 aa3.96□□□□□ -1.78
Pcdh9-204ENSMUST00000193901 Myo15aQ9QZZ4 3511 aa3.96□□□□□ -1.78
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms