RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 Scgb1b10A0A087WPW0 93 aa12,05□□□□□ -0,48
Ltb-203ENSMUST00000173600 Igkv4-58A0A0G2JGI6 119 aa12,05□□□□□ -0,48
Ltb-203ENSMUST00000173600 Igkv1-122A0A140T8M9 119 aa12,05□□□□□ -0,48
Ltb-203ENSMUST00000173600 SelenowP63300 88 aa12,05□□□□□ -0,48
Ltb-203ENSMUST00000173600 Gm5142Q8C5X9 133 aa12,05□□□□□ -0,48
Ltb-203ENSMUST00000173600 Xlr5cQ9JJR2 179 aa12,05□□□□□ -0,48
Ltb-203ENSMUST00000173600 Fat4Q2PZL6 4981 aa12,04□□□□□ -0,48
Ltb-203ENSMUST00000173600 Krtap4-2B1AQ85 167 aa12,04□□□□□ -0,48
Ltb-203ENSMUST00000173600 Rpl32-psP17932 135 aa12,04□□□□□ -0,48
Ltb-203ENSMUST00000173600 Gm5868Q8BJG1 145 aa12,04□□□□□ -0,48
Ltb-203ENSMUST00000173600 Igkv3-10A0A0G2JGN0 119 aa12,03□□□□□ -0,48
Ltb-203ENSMUST00000173600 Uqcc3Q8K2T4 89 aa12,03□□□□□ -0,48
Ltb-203ENSMUST00000173600 ZanO88799 5376 aa12,03□□□□□ -0,48
Ltb-203ENSMUST00000173600 Gm19402J3QJV4 266 aa12,02□□□□□ -0,49
Ltb-203ENSMUST00000173600 Eif4ebp3Q80VV3 101 aa12,02□□□□□ -0,49
Ltb-203ENSMUST00000173600 Gm7102J3QQ10 178 aa12,01□□□□□ -0,49
Ltb-203ENSMUST00000173600 S100a8P27005 89 aa12,01□□□□□ -0,49
Ltb-203ENSMUST00000173600 Hint1P70349 126 aaKnown RBP12,01□□□□□ -0,49
Ltb-203ENSMUST00000173600 Dnal4Q9DCM4 105 aa12,01□□□□□ -0,49
Ltb-203ENSMUST00000173600 Gm10320E9PW43 113 aa12□□□□□ -0,49
Ltb-203ENSMUST00000173600 5930422O12RikQ8C4Y4 123 aa12□□□□□ -0,49
Ltb-203ENSMUST00000173600 Tmem243B2RVB9 118 aa11,99□□□□□ -0,49
Ltb-203ENSMUST00000173600 Cdip1Q9DB75 208 aa11,99□□□□□ -0,49
Ltb-203ENSMUST00000173600 Defb37Q7TMD2 62 aa11,98□□□□□ -0,49
Ltb-203ENSMUST00000173600 Defb29Q8BGW9 78 aa11,97□□□□□ -0,49
Ltb-203ENSMUST00000173600 Cystm1Q8K353 104 aa11,97□□□□□ -0,49
Ltb-203ENSMUST00000173600 Spaca4Q80ZQ0 127 aa11,96□□□□□ -0,49
Ltb-203ENSMUST00000173600 Ighv10-1A0A0B4J1J6 119 aa11,95□□□□□ -0,5
Ltb-203ENSMUST00000173600 Krtap1-3A2A588 173 aa11,95□□□□□ -0,5
Ltb-203ENSMUST00000173600 Vpreb3D3Z6J4 130 aa11,95□□□□□ -0,5
Ltb-203ENSMUST00000173600 Smim26Q3V460 107 aa11,95□□□□□ -0,5
Ltb-203ENSMUST00000173600 Tal2Q62282 108 aa11,95□□□□□ -0,5
Ltb-203ENSMUST00000173600 Vpreb1P13372 142 aa11,93□□□□□ -0,5
Ltb-203ENSMUST00000173600 Smr3aQ61900 147 aa11,93□□□□□ -0,5
Ltb-203ENSMUST00000173600 Gemin7Q9CWY4 129 aa11,92□□□□□ -0,5
Ltb-203ENSMUST00000173600 A0A286YE02 88 aa11,91□□□□□ -0,5
Ltb-203ENSMUST00000173600 BC107364E9Q5A2 140 aa11,91□□□□□ -0,5
Ltb-203ENSMUST00000173600 Lamtor3O88653 124 aa11,91□□□□□ -0,5
Ltb-203ENSMUST00000173600 Rps29P62274 56 aa11,89□□□□□ -0,51
Ltb-203ENSMUST00000173600 Rab37Q9JKM7 223 aa11,89□□□□□ -0,51
Ltb-203ENSMUST00000173600 Dph3Q8K0W9 82 aa11,87□□□□□ -0,51
Ltb-203ENSMUST00000173600 Gm5767A0A0J9YTU8 78 aa11,84□□□□□ -0,51
Ltb-203ENSMUST00000173600 Vmn1r197Q8R265 298 aa11,82□□□□□ -0,52
Ltb-203ENSMUST00000173600 CckP09240 115 aa11,81□□□□□ -0,52
Ltb-203ENSMUST00000173600 Rpl39lQ9CQD0 51 aa11,81□□□□□ -0,52
Ltb-203ENSMUST00000173600 Trav3-4A0A075B654 114 aa11,8□□□□□ -0,52
Ltb-203ENSMUST00000173600 2310057N15RikQ9D6T8 200 aa11,79□□□□□ -0,52
Ltb-203ENSMUST00000173600 Gm10401E9Q3K6 71 aa11,77□□□□□ -0,53
Ltb-203ENSMUST00000173600 A830005F24RikQ8BRT5 167 aa11,77□□□□□ -0,53
Ltb-203ENSMUST00000173600 Crct1Q6PAI5 102 aa11,76□□□□□ -0,53
Ltb-203ENSMUST00000173600 Gm16381A0A1Y7VKT9 73 aa11,75□□□□□ -0,53
Ltb-203ENSMUST00000173600 Gm37389A0A0A6YW05 95 aa11,74□□□□□ -0,53
Ltb-203ENSMUST00000173600 Gm2310J3QNJ2 377 aa11,74□□□□□ -0,53
Ltb-203ENSMUST00000173600 Igkv1-35A0A0G2JDE5 120 aa11,73□□□□□ -0,53
Ltb-203ENSMUST00000173600 Q8BT88 171 aa11,72□□□□□ -0,53
Ltb-203ENSMUST00000173600 Gm21886J3QJU9 214 aa11,71□□□□□ -0,53
Ltb-203ENSMUST00000173600 Igkv3-4A0A140T8Q4 119 aa11,7□□□□□ -0,54
Ltb-203ENSMUST00000173600 Tac4Q99N14 128 aa11,7□□□□□ -0,54
Ltb-203ENSMUST00000173600 Gm9821Q8K076 103 aa11,69□□□□□ -0,54
Ltb-203ENSMUST00000173600 Lce1gQ9D195 139 aa11,69□□□□□ -0,54
Ltb-203ENSMUST00000173600 LorP18165 486 aa11,68□□□□□ -0,54
Ltb-203ENSMUST00000173600 Gm11569B1AQB1 180 aa11,67□□□□□ -0,54
Ltb-203ENSMUST00000173600 P01843 105 aa11,67□□□□□ -0,54
Ltb-203ENSMUST00000173600 Sigmar1O55242 223 aa11,66□□□□□ -0,54
Ltb-203ENSMUST00000173600 G0s2Q61585 103 aa11,66□□□□□ -0,54
Ltb-203ENSMUST00000173600 Igkv2-109A0A075B5K6 120 aa11,65□□□□□ -0,54
Ltb-203ENSMUST00000173600 P06320 134 aa11,65□□□□□ -0,54
Ltb-203ENSMUST00000173600 A730071L15RikQ8C4X0 137 aa11,65□□□□□ -0,54
Ltb-203ENSMUST00000173600 Gm10061D3Z714 54 aa11,64□□□□□ -0,55
Ltb-203ENSMUST00000173600 Gm28051J3QMA2 81 aa11,64□□□□□ -0,55
Ltb-203ENSMUST00000173600 Syne2Q6ZWQ0 6874 aaKnown RBP11,64□□□□□ -0,55
Ltb-203ENSMUST00000173600 Gm16253D3Z167 63 aa11,63□□□□□ -0,55
Ltb-203ENSMUST00000173600 Gm11027G8JL69 66 aa11,63□□□□□ -0,55
Ltb-203ENSMUST00000173600 4930535I16RikQ9CUI2 172 aa11,63□□□□□ -0,55
Ltb-203ENSMUST00000173600 Smim13E9Q942 88 aa11,62□□□□□ -0,55
Ltb-203ENSMUST00000173600 Ccl17F6R5P4 103 aa11,62□□□□□ -0,55
Ltb-203ENSMUST00000173600 Defb47Q30KN1 79 aa11,62□□□□□ -0,55
Ltb-203ENSMUST00000173600 Chchd10Q7TNL9 138 aa11,62□□□□□ -0,55
Ltb-203ENSMUST00000173600 Rnf213E9Q555 5152 aaKnown RBP11,62□□□□□ -0,55
Ltb-203ENSMUST00000173600 1700018G05RikA0A1B0GSI2 66 aa11,61□□□□□ -0,55
Ltb-203ENSMUST00000173600 Gm29423A0A087WRM1 55 aa11,58□□□□□ -0,56
Ltb-203ENSMUST00000173600 9530003J23RikQ8BM26 151 aa11,57□□□□□ -0,56
Ltb-203ENSMUST00000173600 Krtap15-1Q9QZU5 150 aa11,56□□□□□ -0,56
Ltb-203ENSMUST00000173600 Cox6a2P43023 97 aa11,55□□□□□ -0,56
Ltb-203ENSMUST00000173600 Igkv8-21A0A140T8P7 120 aa11,54□□□□□ -0,56
Ltb-203ENSMUST00000173600 A0A286YCQ8 80 aa11,54□□□□□ -0,56
Ltb-203ENSMUST00000173600 CenpwQ3URR0 86 aa11,54□□□□□ -0,56
Ltb-203ENSMUST00000173600 Sec61bQ9CQS8 96 aaKnown RBP11,54□□□□□ -0,56
Ltb-203ENSMUST00000173600 4930524J08RikQ9CUJ5 163 aa11,53□□□□□ -0,56
Ltb-203ENSMUST00000173600 Sfta2E9PXB6 77 aa11,52□□□□□ -0,57
Ltb-203ENSMUST00000173600 Ifitm6A0A1B0GS75 124 aa11,51□□□□□ -0,57
Ltb-203ENSMUST00000173600 Gm11939A2A592 99 aa11,51□□□□□ -0,57
Ltb-203ENSMUST00000173600 1700020N15RikL7MTX3 112 aa11,51□□□□□ -0,57
Ltb-203ENSMUST00000173600 Vps25Q9CQ80 176 aa11,47□□□□□ -0,57
Ltb-203ENSMUST00000173600 Gm12353A2AGJ4 60 aa11,45□□□□□ -0,58
Ltb-203ENSMUST00000173600 Bud31Q6PGH1 103 aa11,41□□□□□ -0,58
Ltb-203ENSMUST00000173600 Cox6cQ9CPQ1 76 aa11,41□□□□□ -0,58
Ltb-203ENSMUST00000173600 Igkv8-28A0A0G2JE47 121 aa11,38□□□□□ -0,59
Ltb-203ENSMUST00000173600 Cox7cP17665 63 aa11,36□□□□□ -0,59
Ltb-203ENSMUST00000173600 Q9DAA3 117 aa11,36□□□□□ -0,59
Retrieved 100 of 22,080 RNA–protein pairs in 36,3 ms