RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 Gm35339A0A140LHH9 1649 aa49.01■■■■■ 5.44
Ltb-203ENSMUST00000173600 NischQ80TM9 1593 aa48.17■■■■■ 5.3
Ltb-203ENSMUST00000173600 Abcc8B2RUS7 1588 aa46.71■■■■■ 5.07
Ltb-203ENSMUST00000173600 Abcc9P70170 1546 aa46.59■■■■■ 5.05
Ltb-203ENSMUST00000173600 ScribQ80U72 1612 aa45.38■■■■■ 4.86
Ltb-203ENSMUST00000173600 NacadQ5SWP3 1504 aa43.78■■■■■ 4.6
Ltb-203ENSMUST00000173600 Kdm5dQ62240 1548 aa43.75■■■■■ 4.59
Ltb-203ENSMUST00000173600 Sycp2Q9CUU3 1500 aa42.97■■■■■ 4.47
Ltb-203ENSMUST00000173600 Dnajc5bQ9CQ94 199 aa42.85■■■■■ 4.45
Ltb-203ENSMUST00000173600 Dcaf1Q80TR8 1506 aa42.82■■■■■ 4.45
Ltb-203ENSMUST00000173600 BicraF8VPZ9 1578 aa42.51■■■■■ 4.4
Ltb-203ENSMUST00000173600 Rb1cc1Q9ESK9 1588 aa41.98■■■■■ 4.31
Ltb-203ENSMUST00000173600 Baz1aO88379 1555 aa41.32■■■■■ 4.2
Ltb-203ENSMUST00000173600 Pds5bQ4VA53 1446 aaKnown RBP41.29■■■■■ 4.2
Ltb-203ENSMUST00000173600 Thoc2B1AZI6 1594 aaKnown RBP41.22■■■■■ 4.19
Ltb-203ENSMUST00000173600 Rhox8Q6VSS7 320 aa41.19■■■■■ 4.18
Ltb-203ENSMUST00000173600 Ccdc180J3QNE4 1664 aa41.17■■■■■ 4.18
Ltb-203ENSMUST00000173600 Crybg2B7ZCC2 1516 aa41.09■■■■■ 4.17
Ltb-203ENSMUST00000173600 Atad2bE9Q166 1460 aaKnown RBP40.83■■■■■ 4.13
Ltb-203ENSMUST00000173600 Zcchc6Q5BLK4 1491 aaKnown RBP40.83■■■■■ 4.13
Ltb-203ENSMUST00000173600 Cc2d2aQ8CFW7 1633 aa40.54■■■■■ 4.08
Ltb-203ENSMUST00000173600 Ercc6F8VPZ5 1481 aa40.46■■■■■ 4.07
Ltb-203ENSMUST00000173600 Smarca2Q6DIC0 1577 aa40.37■■■■■ 4.05
Ltb-203ENSMUST00000173600 Smarca4Q3TKT4 1613 aaKnown RBP40.37■■■■■ 4.05
Ltb-203ENSMUST00000173600 Iqgap2Q3UQ44 1575 aa40.23■■■■■ 4.03
Ltb-203ENSMUST00000173600 Cecr2E9Q2Z1 1453 aa40.19■■■■■ 4.03
Ltb-203ENSMUST00000173600 Fam135aQ6NS59 1506 aa40.16■■■■■ 4.02
Ltb-203ENSMUST00000173600 Dnajc5P60904 198 aa40.07■■■■■ 4.01
Ltb-203ENSMUST00000173600 Wdr62Q3U3T8 1523 aa39.96■■■■□ 3.99
Ltb-203ENSMUST00000173600 Frmpd1A2AKB4 1549 aa39.91■■■■□ 3.98
Ltb-203ENSMUST00000173600 Phldb1Q6PDH0 1371 aaKnown RBP39.71■■■■□ 3.95
Ltb-203ENSMUST00000173600 Baz1bQ9Z277 1479 aa39.5■■■■□ 3.91
Ltb-203ENSMUST00000173600 Unc13aQ4KUS2 1712 aa39.44■■■■□ 3.9
Ltb-203ENSMUST00000173600 Trim41Q5NCC3 630 aa39.42■■■■□ 3.9
Ltb-203ENSMUST00000173600 Ubl4bQ9CQ84 188 aa39.39■■■■□ 3.9
Ltb-203ENSMUST00000173600 Mrc2Q64449 1479 aa39.21■■■■□ 3.87
Ltb-203ENSMUST00000173600 CftrP26361 1476 aa39.13■■■■□ 3.85
Ltb-203ENSMUST00000173600 Cttnbp2B9EJA2 1648 aa39.11■■■■□ 3.85
Ltb-203ENSMUST00000173600 Synj1Q8CHC4 1574 aa39.07■■■■□ 3.84
Ltb-203ENSMUST00000173600 Rtl1Q7M732 1744 aa39.06■■■■□ 3.84
Ltb-203ENSMUST00000173600 Brd4Q9ESU6 1400 aaKnown RBP38.83■■■■□ 3.81
Ltb-203ENSMUST00000173600 Ccdc136Q3TVA9 1136 aa38.64■■■■□ 3.78
Ltb-203ENSMUST00000173600 Lrriq1Q0P5X1 1673 aa38.46■■■■□ 3.75
Ltb-203ENSMUST00000173600 Cux2P70298 1426 aa38.39■■■■□ 3.74
Ltb-203ENSMUST00000173600 Esf1Q3V1V3 845 aaKnown RBP38.38■■■■□ 3.73
Ltb-203ENSMUST00000173600 Kif15Q6P9L6 1387 aa38.31■■■■□ 3.72
Ltb-203ENSMUST00000173600 Rsf1E9PWW9 1441 aaKnown RBP38.31■■■■□ 3.72
Ltb-203ENSMUST00000173600 Kif21aQ9QXL2 1672 aa38.28■■■■□ 3.72
Ltb-203ENSMUST00000173600 Lamc3Q9R0B6 1581 aa38.09■■■■□ 3.69
Ltb-203ENSMUST00000173600 Shroom2A2ALU4 1481 aa37.9■■■■□ 3.66
Ltb-203ENSMUST00000173600 Npm1Q61937 292 aaKnown RBP37.88■■■■□ 3.65
Ltb-203ENSMUST00000173600 Eif4g3Q80XI3 1579 aaKnown RBP37.87■■■■□ 3.65
Ltb-203ENSMUST00000173600 Cep164Q5DU05 1446 aa37.76■■■■□ 3.63
Ltb-203ENSMUST00000173600 Col17a1Q07563 1470 aa37.71■■■■□ 3.63
Ltb-203ENSMUST00000173600 Urb2E9Q7L1 1524 aaKnown RBP37.63■■■■□ 3.61
Ltb-203ENSMUST00000173600 TnnQ80Z71 1560 aa37.56■■■■□ 3.6
Ltb-203ENSMUST00000173600 Dhx29Q6PGC1 1365 aaKnown RBP37.55■■■■□ 3.6
Ltb-203ENSMUST00000173600 Plb1Q3TTY0 1478 aa37.53■■■■□ 3.6
Ltb-203ENSMUST00000173600 Il27Q8K3I6 234 aa37.5■■■■□ 3.59
Ltb-203ENSMUST00000173600 Ccdc18Q640L5 1455 aa37.47■■■■□ 3.59
Ltb-203ENSMUST00000173600 Top2bQ64511 1612 aa37.43■■■■□ 3.58
Ltb-203ENSMUST00000173600 Pabpn1Q8CCS6 302 aaKnown RBP37.43■■■■□ 3.58
Ltb-203ENSMUST00000173600 Crocc2F6XLV1 1638 aa37.39■■■■□ 3.58
Ltb-203ENSMUST00000173600 Camsap1A2AHC3 1581 aa37.39■■■■□ 3.58
Ltb-203ENSMUST00000173600 LrpprcQ6PB66 1392 aaKnown RBP37.38■■■■□ 3.57
Ltb-203ENSMUST00000173600 Golga3P55937 1487 aa37.36■■■■□ 3.57
Ltb-203ENSMUST00000173600 Cngb1E1AZ71 1325 aa37.26■■■■□ 3.56
Ltb-203ENSMUST00000173600 Rusc2Q80U22 1514 aa37.15■■■■□ 3.54
Ltb-203ENSMUST00000173600 PogzQ8BZH4 1409 aaKnown RBP37.14■■■■□ 3.54
Ltb-203ENSMUST00000173600 Pelp1Q9DBD5 1123 aaKnown RBP37.13■■■■□ 3.53
Ltb-203ENSMUST00000173600 Ift140E9PY46 1464 aa37.12■■■■□ 3.53
Ltb-203ENSMUST00000173600 Fmn1Q05860 1466 aa37.02■■■■□ 3.52
Ltb-203ENSMUST00000173600 Duox2A2AQ99 1517 aa36.96■■■■□ 3.51
Ltb-203ENSMUST00000173600 Pcdh10E9PXQ7 1057 aa36.91■■■■□ 3.5
Ltb-203ENSMUST00000173600 Zcchc11B2RX14 1644 aaKnown RBP36.85■■■■□ 3.49
Ltb-203ENSMUST00000173600 Disp1Q3TDN0 1521 aa36.84■■■■□ 3.49
Ltb-203ENSMUST00000173600 Grin2bQ01097 1482 aa36.82■■■■□ 3.48
Ltb-203ENSMUST00000173600 Samd9lQ69Z37 1561 aa36.75■■■■□ 3.47
Ltb-203ENSMUST00000173600 Setd1bQ8CFT2 1985 aa36.74■■■■□ 3.47
Ltb-203ENSMUST00000173600 Nup160Q9Z0W3 1402 aaKnown RBP36.67■■■■□ 3.46
Ltb-203ENSMUST00000173600 Pbrm1Q8BSQ9 1634 aaKnown RBP36.65■■■■□ 3.46
Ltb-203ENSMUST00000173600 Cc2d2bA0A286YDU8 1405 aa36.59■■■■□ 3.45
Ltb-203ENSMUST00000173600 Efcab5A0JP43 1406 aa36.51■■■■□ 3.44
Ltb-203ENSMUST00000173600 Arhgef5E9Q7D5 1581 aa36.5■■■■□ 3.43
Ltb-203ENSMUST00000173600 Rad54l2Q99NG0 1466 aa36.5■■■■□ 3.43
Ltb-203ENSMUST00000173600 Ttbk1Q6PCN3 1308 aa36.48■■■■□ 3.43
Ltb-203ENSMUST00000173600 Grin2aP35436 1464 aa36.39■■■■□ 3.42
Ltb-203ENSMUST00000173600 Magi3Q9EQJ9 1476 aa36.39■■■■□ 3.42
Ltb-203ENSMUST00000173600 AqrQ8CFQ3 1481 aaKnown RBP36.37■■■■□ 3.41
Ltb-203ENSMUST00000173600 Adgrl3Q80TS3 1537 aa36.36■■■■□ 3.41
Ltb-203ENSMUST00000173600 Ccdc88bQ4QRL3 1481 aa36.32■■■■□ 3.41
Ltb-203ENSMUST00000173600 Fgd6Q69ZL1 1399 aa36.28■■■■□ 3.4
Ltb-203ENSMUST00000173600 Top2aQ01320 1528 aaKnown RBP36.26■■■■□ 3.4
Ltb-203ENSMUST00000173600 NrkQ9R0G8 1455 aa36.24■■■■□ 3.39
Ltb-203ENSMUST00000173600 Cep170Q6A065 1588 aa36.24■■■■□ 3.39
Ltb-203ENSMUST00000173600 PtprkP35822 1457 aa36.23■■■■□ 3.39
Ltb-203ENSMUST00000173600 Gapvd1Q6PAR5 1458 aa36.19■■■■□ 3.38
Ltb-203ENSMUST00000173600 Gm156Q58A37 223 aa36.14■■■■□ 3.38
Ltb-203ENSMUST00000173600 Pla2r1Q62028 1487 aa36.13■■■■□ 3.37
Ltb-203ENSMUST00000173600 Shroom4Q1W617 1475 aa36.1■■■■□ 3.37
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms