RNA–Protein interactions for RNA: ENSMUST00000173600.1

Ltb-203, Transcript of Lymphotoxin-beta, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ltb, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-203ENSMUST00000173600 Gm35339A0A140LHH9 1649 aa49,01■■■■■ 5,44
Ltb-203ENSMUST00000173600 NischQ80TM9 1593 aa48,17■■■■■ 5,3
Ltb-203ENSMUST00000173600 Abcc8B2RUS7 1588 aa46,71■■■■■ 5,07
Ltb-203ENSMUST00000173600 Abcc9P70170 1546 aa46,59■■■■■ 5,05
Ltb-203ENSMUST00000173600 ScribQ80U72 1612 aa45,38■■■■■ 4,86
Ltb-203ENSMUST00000173600 NacadQ5SWP3 1504 aa43,78■■■■■ 4,6
Ltb-203ENSMUST00000173600 Kdm5dQ62240 1548 aa43,75■■■■■ 4,59
Ltb-203ENSMUST00000173600 Sycp2Q9CUU3 1500 aa42,97■■■■■ 4,47
Ltb-203ENSMUST00000173600 Dnajc5bQ9CQ94 199 aa42,85■■■■■ 4,45
Ltb-203ENSMUST00000173600 Dcaf1Q80TR8 1506 aa42,82■■■■■ 4,45
Ltb-203ENSMUST00000173600 BicraF8VPZ9 1578 aa42,51■■■■■ 4,4
Ltb-203ENSMUST00000173600 Rb1cc1Q9ESK9 1588 aa41,98■■■■■ 4,31
Ltb-203ENSMUST00000173600 Baz1aO88379 1555 aa41,32■■■■■ 4,2
Ltb-203ENSMUST00000173600 Pds5bQ4VA53 1446 aaKnown RBP41,29■■■■■ 4,2
Ltb-203ENSMUST00000173600 Thoc2B1AZI6 1594 aaKnown RBP41,22■■■■■ 4,19
Ltb-203ENSMUST00000173600 Rhox8Q6VSS7 320 aa41,19■■■■■ 4,18
Ltb-203ENSMUST00000173600 Ccdc180J3QNE4 1664 aa41,17■■■■■ 4,18
Ltb-203ENSMUST00000173600 Crybg2B7ZCC2 1516 aa41,09■■■■■ 4,17
Ltb-203ENSMUST00000173600 Atad2bE9Q166 1460 aaKnown RBP40,83■■■■■ 4,13
Ltb-203ENSMUST00000173600 Zcchc6Q5BLK4 1491 aaKnown RBP40,83■■■■■ 4,13
Ltb-203ENSMUST00000173600 Cc2d2aQ8CFW7 1633 aa40,54■■■■■ 4,08
Ltb-203ENSMUST00000173600 Ercc6F8VPZ5 1481 aa40,46■■■■■ 4,07
Ltb-203ENSMUST00000173600 Smarca2Q6DIC0 1577 aa40,37■■■■■ 4,05
Ltb-203ENSMUST00000173600 Smarca4Q3TKT4 1613 aaKnown RBP40,37■■■■■ 4,05
Ltb-203ENSMUST00000173600 Iqgap2Q3UQ44 1575 aa40,23■■■■■ 4,03
Ltb-203ENSMUST00000173600 Cecr2E9Q2Z1 1453 aa40,19■■■■■ 4,03
Ltb-203ENSMUST00000173600 Fam135aQ6NS59 1506 aa40,16■■■■■ 4,02
Ltb-203ENSMUST00000173600 Dnajc5P60904 198 aa40,07■■■■■ 4,01
Ltb-203ENSMUST00000173600 Wdr62Q3U3T8 1523 aa39,96■■■■□ 3,99
Ltb-203ENSMUST00000173600 Frmpd1A2AKB4 1549 aa39,91■■■■□ 3,98
Ltb-203ENSMUST00000173600 Phldb1Q6PDH0 1371 aaKnown RBP39,71■■■■□ 3,95
Ltb-203ENSMUST00000173600 Baz1bQ9Z277 1479 aa39,5■■■■□ 3,91
Ltb-203ENSMUST00000173600 Unc13aQ4KUS2 1712 aa39,44■■■■□ 3,9
Ltb-203ENSMUST00000173600 Trim41Q5NCC3 630 aa39,42■■■■□ 3,9
Ltb-203ENSMUST00000173600 Ubl4bQ9CQ84 188 aa39,39■■■■□ 3,9
Ltb-203ENSMUST00000173600 Mrc2Q64449 1479 aa39,21■■■■□ 3,87
Ltb-203ENSMUST00000173600 CftrP26361 1476 aa39,13■■■■□ 3,85
Ltb-203ENSMUST00000173600 Cttnbp2B9EJA2 1648 aa39,11■■■■□ 3,85
Ltb-203ENSMUST00000173600 Synj1Q8CHC4 1574 aa39,07■■■■□ 3,84
Ltb-203ENSMUST00000173600 Rtl1Q7M732 1744 aa39,06■■■■□ 3,84
Ltb-203ENSMUST00000173600 Brd4Q9ESU6 1400 aaKnown RBP38,83■■■■□ 3,81
Ltb-203ENSMUST00000173600 Ccdc136Q3TVA9 1136 aa38,64■■■■□ 3,78
Ltb-203ENSMUST00000173600 Lrriq1Q0P5X1 1673 aa38,46■■■■□ 3,75
Ltb-203ENSMUST00000173600 Cux2P70298 1426 aa38,39■■■■□ 3,74
Ltb-203ENSMUST00000173600 Esf1Q3V1V3 845 aaKnown RBP38,38■■■■□ 3,73
Ltb-203ENSMUST00000173600 Kif15Q6P9L6 1387 aa38,31■■■■□ 3,72
Ltb-203ENSMUST00000173600 Rsf1E9PWW9 1441 aaKnown RBP38,31■■■■□ 3,72
Ltb-203ENSMUST00000173600 Kif21aQ9QXL2 1672 aa38,28■■■■□ 3,72
Ltb-203ENSMUST00000173600 Lamc3Q9R0B6 1581 aa38,09■■■■□ 3,69
Ltb-203ENSMUST00000173600 Shroom2A2ALU4 1481 aa37,9■■■■□ 3,66
Ltb-203ENSMUST00000173600 Npm1Q61937 292 aaKnown RBP37,88■■■■□ 3,65
Ltb-203ENSMUST00000173600 Eif4g3Q80XI3 1579 aaKnown RBP37,87■■■■□ 3,65
Ltb-203ENSMUST00000173600 Cep164Q5DU05 1446 aa37,76■■■■□ 3,63
Ltb-203ENSMUST00000173600 Col17a1Q07563 1470 aa37,71■■■■□ 3,63
Ltb-203ENSMUST00000173600 Urb2E9Q7L1 1524 aaKnown RBP37,63■■■■□ 3,61
Ltb-203ENSMUST00000173600 TnnQ80Z71 1560 aa37,56■■■■□ 3,6
Ltb-203ENSMUST00000173600 Dhx29Q6PGC1 1365 aaKnown RBP37,55■■■■□ 3,6
Ltb-203ENSMUST00000173600 Plb1Q3TTY0 1478 aa37,53■■■■□ 3,6
Ltb-203ENSMUST00000173600 Il27Q8K3I6 234 aa37,5■■■■□ 3,59
Ltb-203ENSMUST00000173600 Ccdc18Q640L5 1455 aa37,47■■■■□ 3,59
Ltb-203ENSMUST00000173600 Top2bQ64511 1612 aa37,43■■■■□ 3,58
Ltb-203ENSMUST00000173600 Pabpn1Q8CCS6 302 aaKnown RBP37,43■■■■□ 3,58
Ltb-203ENSMUST00000173600 Crocc2F6XLV1 1638 aa37,39■■■■□ 3,58
Ltb-203ENSMUST00000173600 Camsap1A2AHC3 1581 aa37,39■■■■□ 3,58
Ltb-203ENSMUST00000173600 LrpprcQ6PB66 1392 aaKnown RBP37,38■■■■□ 3,57
Ltb-203ENSMUST00000173600 Golga3P55937 1487 aa37,36■■■■□ 3,57
Ltb-203ENSMUST00000173600 Cngb1E1AZ71 1325 aa37,26■■■■□ 3,56
Ltb-203ENSMUST00000173600 Rusc2Q80U22 1514 aa37,15■■■■□ 3,54
Ltb-203ENSMUST00000173600 PogzQ8BZH4 1409 aaKnown RBP37,14■■■■□ 3,54
Ltb-203ENSMUST00000173600 Pelp1Q9DBD5 1123 aaKnown RBP37,13■■■■□ 3,53
Ltb-203ENSMUST00000173600 Ift140E9PY46 1464 aa37,12■■■■□ 3,53
Ltb-203ENSMUST00000173600 Fmn1Q05860 1466 aa37,02■■■■□ 3,52
Ltb-203ENSMUST00000173600 Duox2A2AQ99 1517 aa36,96■■■■□ 3,51
Ltb-203ENSMUST00000173600 Pcdh10E9PXQ7 1057 aa36,91■■■■□ 3,5
Ltb-203ENSMUST00000173600 Zcchc11B2RX14 1644 aaKnown RBP36,85■■■■□ 3,49
Ltb-203ENSMUST00000173600 Disp1Q3TDN0 1521 aa36,84■■■■□ 3,49
Ltb-203ENSMUST00000173600 Grin2bQ01097 1482 aa36,82■■■■□ 3,48
Ltb-203ENSMUST00000173600 Samd9lQ69Z37 1561 aa36,75■■■■□ 3,47
Ltb-203ENSMUST00000173600 Setd1bQ8CFT2 1985 aa36,74■■■■□ 3,47
Ltb-203ENSMUST00000173600 Nup160Q9Z0W3 1402 aaKnown RBP36,67■■■■□ 3,46
Ltb-203ENSMUST00000173600 Pbrm1Q8BSQ9 1634 aaKnown RBP36,65■■■■□ 3,46
Ltb-203ENSMUST00000173600 Cc2d2bA0A286YDU8 1405 aa36,59■■■■□ 3,45
Ltb-203ENSMUST00000173600 Efcab5A0JP43 1406 aa36,51■■■■□ 3,44
Ltb-203ENSMUST00000173600 Arhgef5E9Q7D5 1581 aa36,5■■■■□ 3,43
Ltb-203ENSMUST00000173600 Rad54l2Q99NG0 1466 aa36,5■■■■□ 3,43
Ltb-203ENSMUST00000173600 Ttbk1Q6PCN3 1308 aa36,48■■■■□ 3,43
Ltb-203ENSMUST00000173600 Grin2aP35436 1464 aa36,39■■■■□ 3,42
Ltb-203ENSMUST00000173600 Magi3Q9EQJ9 1476 aa36,39■■■■□ 3,42
Ltb-203ENSMUST00000173600 AqrQ8CFQ3 1481 aaKnown RBP36,37■■■■□ 3,41
Ltb-203ENSMUST00000173600 Adgrl3Q80TS3 1537 aa36,36■■■■□ 3,41
Ltb-203ENSMUST00000173600 Ccdc88bQ4QRL3 1481 aa36,32■■■■□ 3,41
Ltb-203ENSMUST00000173600 Fgd6Q69ZL1 1399 aa36,28■■■■□ 3,4
Ltb-203ENSMUST00000173600 Top2aQ01320 1528 aaKnown RBP36,26■■■■□ 3,4
Ltb-203ENSMUST00000173600 NrkQ9R0G8 1455 aa36,24■■■■□ 3,39
Ltb-203ENSMUST00000173600 Cep170Q6A065 1588 aa36,24■■■■□ 3,39
Ltb-203ENSMUST00000173600 PtprkP35822 1457 aa36,23■■■■□ 3,39
Ltb-203ENSMUST00000173600 Gapvd1Q6PAR5 1458 aa36,19■■■■□ 3,38
Ltb-203ENSMUST00000173600 Gm156Q58A37 223 aa36,14■■■■□ 3,38
Ltb-203ENSMUST00000173600 Pla2r1Q62028 1487 aa36,13■■■■□ 3,37
Ltb-203ENSMUST00000173600 Shroom4Q1W617 1475 aa36,1■■■■□ 3,37
Retrieved 100 of 22,080 RNA–protein pairs in 8,8 ms