RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Krtap11-1E9Q2E9 183 aa8.19□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Igkv3-3A0A140T8Q0 119 aa8.18□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Vpreb3D3Z6J4 130 aa8.18□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 A730009L09RikA0A1B0GS82 72 aa8.17□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Srsf12Q8C8K3 266 aa8.17□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Wfdc13Q5DQQ6 81 aa8.17□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Ndufs5Q99LY9 106 aa8.17□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Gm10267M0QWD8 85 aa8.17□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Reg3aO09037 175 aa8.17□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 OtogO55225 2910 aa8.16□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Krtap24-1G3X9A2 248 aa8.16□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Smim29Q8R043 75 aa8.16□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Tenm3Q9WTS6 2715 aa8.15□□□□□ -1.1
Pcdh1-202ENSMUST00000159405 Fam104aA2A6P4 185 aa8.15□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 Igkv3-4A0A140T8Q4 119 aa8.14□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 Gm20604F8WIA3 75 aa8.14□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 U90926O08546 118 aa8.14□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 1700042G07RikB1AUF7 90 aa8.13□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 Gm21886J3QJU9 214 aa8.12□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 Defb10Q8R2I8 73 aa8.12□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 1700018G05RikA0A1B0GSI2 66 aa8.1□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 Gm26620Q9CY65 116 aa8.1□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 1700012A03RikQ9DAF1 130 aa8.1□□□□□ -1.11
Pcdh1-202ENSMUST00000159405 Rpl37aP61514 92 aa8.08□□□□□ -1.12
Pcdh1-202ENSMUST00000159405 Tenm4Q3UHK6 2771 aa8.07□□□□□ -1.12
Pcdh1-202ENSMUST00000159405 Gm12353A2AGJ4 60 aa8.07□□□□□ -1.12
Pcdh1-202ENSMUST00000159405 Chtf8P0CG14 533 aa8.06□□□□□ -1.12
Pcdh1-202ENSMUST00000159405 Gm10160F6Y577 67 aa8.05□□□□□ -1.12
Pcdh1-202ENSMUST00000159405 Gm10643Q3URG9 111 aa8.04□□□□□ -1.12
Pcdh1-202ENSMUST00000159405 Gm3646F6S692 53 aa8.03□□□□□ -1.12
Pcdh1-202ENSMUST00000159405 Gm20661K7N787 53 aa8.02□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Psors1c2Q80ZC9 134 aa8.02□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Ndufb1P0DN34 57 aa8.01□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Spata3Q9D9T6 193 aa8.01□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Gm7276Q3TYW4 209 aa8□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Srrm2Q8BTI8 2703 aaKnown RBP7.99□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Ly6g6cQ9Z1Q4 126 aa7.99□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Nupr2Q497P3 102 aa7.98□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Obox2E9PXV9 151 aa7.98□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 OxtP35454 125 aa7.98□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Zcchc13Q9D548 170 aa7.98□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Gm28230A0A0A0MQ91 144 aa7.97□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Fam168bQ80XQ8 194 aa7.97□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Gm16485Q8C4B7 115 aa7.96□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Sprr4Q8CGN8 76 aa7.96□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 FcgbpE9Q0B5 2583 aa7.96□□□□□ -1.13
Pcdh1-202ENSMUST00000159405 Csmd2V9GX34 3611 aa7.95□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Igkv3-12A0A140T8P0 119 aa7.95□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 ApcQ61315 2845 aa7.94□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Dmac1Q9CQ00 111 aa7.94□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 CubnQ9JLB4 3623 aa7.93□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Col7a1Q63870 2944 aa7.92□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Igkv3-7A0A0G2JE31 119 aa7.92□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Snhg11Q4G0K9 87 aa7.91□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 1600014C23RikQ9DAX4 101 aa7.91□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Ighv8-13A0A075B5Y0 101 aa7.9□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Gm36176A0A1W2P8D5 158 aa7.9□□□□□ -1.14
Pcdh1-202ENSMUST00000159405 Tenm1Q9WTS4 2731 aa7.89□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 SycnQ8VCK7 134 aa7.89□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Phf5aP83870 110 aaKnown RBP7.88□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Phxr5P08399 672 aa7.88□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 P84750 121 aa7.88□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Gm9821Q8K076 103 aa7.88□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Igkv3-5A0A140T8M6 119 aa7.87□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Gm37013Q8K491 104 aa7.87□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Gm4707V9GXN5 68 aa7.86□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Chchd10Q7TNL9 138 aa7.84□□□□□ -1.15
Pcdh1-202ENSMUST00000159405 Wfdc3Q14AE4 130 aa7.83□□□□□ -1.16
Pcdh1-202ENSMUST00000159405 Wfdc6bF6ULY1 148 aa7.82□□□□□ -1.16
Pcdh1-202ENSMUST00000159405 Gm9508A0A1W2P7W0 230 aa7.81□□□□□ -1.16
Pcdh1-202ENSMUST00000159405 Gm11627A6PWP4 55 aa7.77□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Prol1E9PYQ4 312 aa7.76□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Limd2Q8BGB5 128 aa7.76□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Adm2Q7TNK8 150 aa7.76□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Xirp2Q4U4S6 3784 aa7.75□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Wfdc10Q3V2J9 124 aa7.75□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Wfdc17Q5SSJ1 76 aa7.74□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 TgO08710 2766 aa7.72□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Defb39Q70KL3 74 aa7.71□□□□□ -1.17
Pcdh1-202ENSMUST00000159405 Fbn1Q61554 2873 aaKnown RBP7.7□□□□□ -1.18
Pcdh1-202ENSMUST00000159405 Odf3bQ5M8M2 238 aa7.7□□□□□ -1.18
Pcdh1-202ENSMUST00000159405 Defb13Q8R2I4 64 aa7.69□□□□□ -1.18
Pcdh1-202ENSMUST00000159405 Gm12216A0A1W2P827 62 aa7.68□□□□□ -1.18
Pcdh1-202ENSMUST00000159405 Uqcr11Q9CPX8 56 aa7.67□□□□□ -1.18
Pcdh1-202ENSMUST00000159405 Plac8Q9JI48 112 aa7.67□□□□□ -1.18
Pcdh1-202ENSMUST00000159405 Gm10642Q3TWM1 71 aa7.66□□□□□ -1.18
Pcdh1-202ENSMUST00000159405 AplnQ9R0R4 77 aa7.64□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 Gm21798J3QNU5 87 aa7.63□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 Q8BGJ3 129 aa7.62□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 Gm2310J3QNJ2 377 aa7.61□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 2310034C09RikQ9D746 214 aa7.59□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 VwfQ8CIZ8 2813 aa7.59□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 Cypt15B1AXS0 87 aa7.59□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 Defb1P56386 69 aa7.59□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 Defb11Q8R2I7 77 aa7.59□□□□□ -1.19
Pcdh1-202ENSMUST00000159405 Sprr1aQ62266 144 aa7.58□□□□□ -1.2
Pcdh1-202ENSMUST00000159405 Gm11565A2A4M7 156 aa7.57□□□□□ -1.2
Pcdh1-202ENSMUST00000159405 Anapc11Q9CPX9 84 aa7.56□□□□□ -1.2
Pcdh1-202ENSMUST00000159405 RetnlbQ99P86 105 aa7.55□□□□□ -1.2
Pcdh1-202ENSMUST00000159405 Gm10999F6Q4M4 69 aa7.55□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 91.1 ms