RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Igkv8-28A0A0G2JE47 121 aa7.89□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Ighv2-5A0A0A6YY69 116 aa7.88□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Fam168bQ80XQ8 194 aa7.88□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Igkv8-19A0A0G2JFN8 121 aa7.88□□□□□ -1.15
Ndc1-204ENSMUST00000139560 A330070K13RikQ8CA53 115 aa7.88□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Elof1P60003 83 aa7.87□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Gm10642Q3TWM1 71 aa7.87□□□□□ -1.15
Ndc1-204ENSMUST00000139560 NbeaQ9EPN1 2936 aa7.87□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Defb50Q6TU36 73 aa7.87□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Gm10308Q9CVR5 141 aa7.87□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Krtap11-1E9Q2E9 183 aa7.86□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Lelp1Q9DAE3 120 aa7.86□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Gm43218A0A0G2JGT0 114 aa7.85□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Snhg11Q4G0K9 87 aa7.84□□□□□ -1.15
Ndc1-204ENSMUST00000139560 Defb1P56386 69 aa7.84□□□□□ -1.15
Ndc1-204ENSMUST00000139560 E130208F15RikQ3UPV3 143 aa7.82□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Q8BT88 171 aa7.82□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Phf5aP83870 110 aaKnown RBP7.82□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Ighv2-2A0A075B5P8 116 aa7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Gm11213A0A1B0GR83 88 aa7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 P01821 116 aa7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Lypd5Q9D7Z7 256 aa7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 FlncQ8VHX6 2726 aaKnown RBP7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Defb11Q8R2I7 77 aa7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Krtap26-1Q9D7N2 215 aa7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Gm10999F6Q4M4 69 aa7.81□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Coa5Q99M07 74 aa7.8□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Dmac1Q9CQ00 111 aa7.79□□□□□ -1.16
Ndc1-204ENSMUST00000139560 C530025M09RikF6RGA8 229 aa7.79□□□□□ -1.16
Ndc1-204ENSMUST00000139560 AY074887Q8R5F9 132 aa7.78□□□□□ -1.16
Ndc1-204ENSMUST00000139560 AI606181Q8C7B9 129 aa7.78□□□□□ -1.16
Ndc1-204ENSMUST00000139560 Gm10837Q3UTT8 145 aa7.77□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Gm20661K7N787 53 aa7.76□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Cystm1Q8K353 104 aa7.76□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Cdc42se1Q8BHL7 80 aa7.76□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Gm11627A6PWP4 55 aa7.75□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Phxr5P08399 672 aa7.75□□□□□ -1.17
Ndc1-204ENSMUST00000139560 LystP97412 3788 aa7.74□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Spaca4Q80ZQ0 127 aa7.74□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Helz2E9QAM5 2947 aaKnown RBP7.74□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Spata3Q9D9T6 193 aa7.74□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Smim29Q8R043 75 aa7.73□□□□□ -1.17
Ndc1-204ENSMUST00000139560 LrbaQ9ESE1 2856 aa7.73□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Chchd10Q7TNL9 138 aa7.73□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Nf1Q04690 2841 aa7.72□□□□□ -1.17
Ndc1-204ENSMUST00000139560 A930002H24RikQ8C8Y3 163 aa7.71□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Sprr4Q8CGN8 76 aa7.71□□□□□ -1.17
Ndc1-204ENSMUST00000139560 Znf414Q9DCK4 299 aa7.71□□□□□ -1.18
Ndc1-204ENSMUST00000139560 Gm7137J3QMW1 236 aa7.71□□□□□ -1.18
Ndc1-204ENSMUST00000139560 CnbpP53996 178 aaKnown RBP7.7□□□□□ -1.18
Ndc1-204ENSMUST00000139560 Gm10320E9PW43 113 aa7.69□□□□□ -1.18
Ndc1-204ENSMUST00000139560 Gm7138L7N2C3 230 aa7.69□□□□□ -1.18
Ndc1-204ENSMUST00000139560 Gm3238W4VSP7 230 aa7.69□□□□□ -1.18
Ndc1-204ENSMUST00000139560 RetnlbQ99P86 105 aa7.69□□□□□ -1.18
Ndc1-204ENSMUST00000139560 Gpr15lA0A0B4J1N3 78 aa7.68□□□□□ -1.18
Ndc1-204ENSMUST00000139560 Anapc11Q9CPX9 84 aa7.68□□□□□ -1.18
Ndc1-204ENSMUST00000139560 AplnQ9R0R4 77 aa7.65□□□□□ -1.18
Ndc1-204ENSMUST00000139560 Q8BGJ3 129 aa7.64□□□□□ -1.19
Ndc1-204ENSMUST00000139560 Chtf8P0CG14 533 aa7.64□□□□□ -1.19
Ndc1-204ENSMUST00000139560 Phxr4P15974 95 aa7.64□□□□□ -1.19
Ndc1-204ENSMUST00000139560 Sprr1bQ62267 153 aa7.62□□□□□ -1.19
Ndc1-204ENSMUST00000139560 ApcQ61315 2845 aa7.6□□□□□ -1.19
Ndc1-204ENSMUST00000139560 CubnQ9JLB4 3623 aa7.6□□□□□ -1.19
Ndc1-204ENSMUST00000139560 Prol1E9PYQ4 312 aa7.59□□□□□ -1.19
Ndc1-204ENSMUST00000139560 Gm7276Q3TYW4 209 aa7.59□□□□□ -1.19
Ndc1-204ENSMUST00000139560 Psors1c2Q80ZC9 134 aa7.59□□□□□ -1.19
Ndc1-204ENSMUST00000139560 Plac8Q9JI48 112 aa7.58□□□□□ -1.2
Ndc1-204ENSMUST00000139560 Itpr2Q9Z329 2701 aa7.55□□□□□ -1.2
Ndc1-204ENSMUST00000139560 Limd2Q8BGB5 128 aa7.55□□□□□ -1.2
Ndc1-204ENSMUST00000139560 Gm27235Q3UW50 83 aa7.54□□□□□ -1.2
Ndc1-204ENSMUST00000139560 Gm9508A0A1W2P7W0 230 aa7.52□□□□□ -1.21
Ndc1-204ENSMUST00000139560 Hspg2Q05793 3707 aaKnown RBP7.51□□□□□ -1.21
Ndc1-204ENSMUST00000139560 Gm12216A0A1W2P827 62 aa7.5□□□□□ -1.21
Ndc1-204ENSMUST00000139560 Defb9Q8R2I6 67 aa7.49□□□□□ -1.21
Ndc1-204ENSMUST00000139560 Pdzd2E9Q1M1 2796 aa7.49□□□□□ -1.21
Ndc1-204ENSMUST00000139560 Gm17606F6ZL36 78 aa7.48□□□□□ -1.21
Ndc1-204ENSMUST00000139560 Zcchc13Q9D548 170 aa7.45□□□□□ -1.22
Ndc1-204ENSMUST00000139560 Xirp2Q4U4S6 3784 aa7.45□□□□□ -1.22
Ndc1-204ENSMUST00000139560 Srrm2Q8BTI8 2703 aaKnown RBP7.45□□□□□ -1.22
Ndc1-204ENSMUST00000139560 TgO08710 2766 aa7.44□□□□□ -1.22
Ndc1-204ENSMUST00000139560 Cypt15B1AXS0 87 aa7.43□□□□□ -1.22
Ndc1-204ENSMUST00000139560 4930507D05RikQ8C9C9 103 aa7.42□□□□□ -1.22
Ndc1-204ENSMUST00000139560 FcgbpE9Q0B5 2583 aa7.41□□□□□ -1.22
Ndc1-204ENSMUST00000139560 A730071L15RikQ8C4X0 137 aa7.4□□□□□ -1.22
Ndc1-204ENSMUST00000139560 BsnO88737 3942 aa7.39□□□□□ -1.23
Ndc1-204ENSMUST00000139560 Gm36176A0A1W2P8D5 158 aa7.36□□□□□ -1.23
Ndc1-204ENSMUST00000139560 Uqcr11Q9CPX8 56 aa7.35□□□□□ -1.23
Ndc1-204ENSMUST00000139560 2310034C09RikQ9D746 214 aa7.34□□□□□ -1.24
Ndc1-204ENSMUST00000139560 OtogO55225 2910 aa7.33□□□□□ -1.24
Ndc1-204ENSMUST00000139560 Fam104aA2A6P4 185 aa7.32□□□□□ -1.24
Ndc1-204ENSMUST00000139560 6030445D17RikE9Q8F9 148 aa7.32□□□□□ -1.24
Ndc1-204ENSMUST00000139560 SmcpP15265 143 aa7.31□□□□□ -1.24
Ndc1-204ENSMUST00000139560 Mp68P56379 58 aa7.31□□□□□ -1.24
Ndc1-204ENSMUST00000139560 Ank2Q8C8R3 3898 aa7.31□□□□□ -1.24
Ndc1-204ENSMUST00000139560 Rnase13Q5GAM7 153 aa7.29□□□□□ -1.24
Ndc1-204ENSMUST00000139560 Gm3880A0A1B0GSB3 72 aa7.29□□□□□ -1.24
Ndc1-204ENSMUST00000139560 AW011738F6S7Q2 159 aa7.29□□□□□ -1.24
Ndc1-204ENSMUST00000139560 Gm21798J3QNU5 87 aa7.28□□□□□ -1.24
Ndc1-204ENSMUST00000139560 OxtP35454 125 aa7.28□□□□□ -1.24
Ndc1-204ENSMUST00000139560 Gm10643Q3URG9 111 aa7.28□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 359.5 ms