RNA–Protein interactions for RNA: ENSMUST00000113686.7

Tpm1-206, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 998 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-206ENSMUST00000113686 Xlr5cQ9JJR2 179 aa11,66□□□□□ -0,54
Tpm1-206ENSMUST00000113686 Gm10320E9PW43 113 aa11,65□□□□□ -0,54
Tpm1-206ENSMUST00000113686 Vpreb1P13372 142 aa11,64□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Gm5868Q8BJG1 145 aa11,64□□□□□ -0,55
Tpm1-206ENSMUST00000113686 5930422O12RikQ8C4Y4 123 aa11,64□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Tmem243B2RVB9 118 aa11,63□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Hint1P70349 126 aaKnown RBP11,63□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Defb37Q7TMD2 62 aa11,63□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Eif4ebp3Q80VV3 101 aa11,63□□□□□ -0,55
Tpm1-206ENSMUST00000113686 SelenowP63300 88 aa11,62□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Vpreb3D3Z6J4 130 aa11,61□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Scgb1b10A0A087WPW0 93 aa11,6□□□□□ -0,55
Tpm1-206ENSMUST00000113686 Lamtor3O88653 124 aa11,58□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Dph3Q8K0W9 82 aa11,58□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Dnal4Q9DCM4 105 aa11,58□□□□□ -0,56
Tpm1-206ENSMUST00000113686 BC107364E9Q5A2 140 aa11,57□□□□□ -0,56
Tpm1-206ENSMUST00000113686 IqcjQ8BPW0 110 aa11,57□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Cited4Q9WUL8 182 aa11,57□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Ighv10-1A0A0B4J1J6 119 aa11,56□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Vamp8O70404 101 aa11,56□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Defb29Q8BGW9 78 aa11,56□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Pam16Q9CQV1 125 aa11,56□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Gm5767A0A0J9YTU8 78 aa11,55□□□□□ -0,56
Tpm1-206ENSMUST00000113686 A0A286YE02 88 aa11,55□□□□□ -0,56
Tpm1-206ENSMUST00000113686 Smim26Q3V460 107 aa11,52□□□□□ -0,57
Tpm1-206ENSMUST00000113686 Uqcc3Q8K2T4 89 aa11,52□□□□□ -0,57
Tpm1-206ENSMUST00000113686 Cdip1Q9DB75 208 aa11,52□□□□□ -0,57
Tpm1-206ENSMUST00000113686 Gm2310J3QNJ2 377 aa11,5□□□□□ -0,57
Tpm1-206ENSMUST00000113686 ZanO88799 5376 aa11,49□□□□□ -0,57
Tpm1-206ENSMUST00000113686 A830005F24RikQ8BRT5 167 aa11,49□□□□□ -0,57
Tpm1-206ENSMUST00000113686 Krtap1-3A2A588 173 aa11,48□□□□□ -0,57
Tpm1-206ENSMUST00000113686 Krtap17-1A2A5X6 109 aa11,47□□□□□ -0,57
Tpm1-206ENSMUST00000113686 Tal2Q62282 108 aa11,46□□□□□ -0,57
Tpm1-206ENSMUST00000113686 Vmn1r197Q8R265 298 aa11,45□□□□□ -0,58
Tpm1-206ENSMUST00000113686 Gemin7Q9CWY4 129 aa11,45□□□□□ -0,58
Tpm1-206ENSMUST00000113686 Gm21886J3QJU9 214 aa11,43□□□□□ -0,58
Tpm1-206ENSMUST00000113686 Rab37Q9JKM7 223 aa11,43□□□□□ -0,58
Tpm1-206ENSMUST00000113686 Gm10401E9Q3K6 71 aa11,41□□□□□ -0,58
Tpm1-206ENSMUST00000113686 Rpl39lQ9CQD0 51 aa11,41□□□□□ -0,58
Tpm1-206ENSMUST00000113686 Ctxnd2A0A1B0GQX3 59 aa11,39□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Q8BT88 171 aa11,39□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Tma7Q8K003 64 aaKnown RBP11,39□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Trav3-4A0A075B654 114 aa11,38□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Igkv3-4A0A140T8Q4 119 aa11,38□□□□□ -0,59
Tpm1-206ENSMUST00000113686 A730071L15RikQ8C4X0 137 aa11,38□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Gm9821Q8K076 103 aa11,38□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Fat4Q2PZL6 4981 aa11,37□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Gm37389A0A0A6YW05 95 aa11,37□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Smr3aQ61900 147 aa11,37□□□□□ -0,59
Tpm1-206ENSMUST00000113686 4930535I16RikQ9CUI2 172 aa11,36□□□□□ -0,59
Tpm1-206ENSMUST00000113686 CckP09240 115 aa11,35□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Gm16253D3Z167 63 aa11,34□□□□□ -0,59
Tpm1-206ENSMUST00000113686 Gm16381A0A1Y7VKT9 73 aa11,32□□□□□ -0,6
Tpm1-206ENSMUST00000113686 Igkv1-35A0A0G2JDE5 120 aa11,31□□□□□ -0,6
Tpm1-206ENSMUST00000113686 Gm11939A2A592 99 aa11,31□□□□□ -0,6
Tpm1-206ENSMUST00000113686 P06320 134 aa11,3□□□□□ -0,6
Tpm1-206ENSMUST00000113686 2310057N15RikQ9D6T8 200 aa11,29□□□□□ -0,6
Tpm1-206ENSMUST00000113686 Chchd10Q7TNL9 138 aa11,27□□□□□ -0,61
Tpm1-206ENSMUST00000113686 1700018G05RikA0A1B0GSI2 66 aa11,26□□□□□ -0,61
Tpm1-206ENSMUST00000113686 Igkv2-109A0A075B5K6 120 aa11,24□□□□□ -0,61
Tpm1-206ENSMUST00000113686 Grcc10O35127 126 aa11,24□□□□□ -0,61
Tpm1-206ENSMUST00000113686 Sigmar1O55242 223 aa11,24□□□□□ -0,61
Tpm1-206ENSMUST00000113686 Igkv8-21A0A140T8P7 120 aa11,23□□□□□ -0,61
Tpm1-206ENSMUST00000113686 Sec61bQ9CQS8 96 aaKnown RBP11,22□□□□□ -0,61
Tpm1-206ENSMUST00000113686 G0s2Q61585 103 aa11,2□□□□□ -0,62
Tpm1-206ENSMUST00000113686 Tac4Q99N14 128 aa11,2□□□□□ -0,62
Tpm1-206ENSMUST00000113686 Krtap15-1Q9QZU5 150 aa11,2□□□□□ -0,62
Tpm1-206ENSMUST00000113686 Cox6a2P43023 97 aa11,18□□□□□ -0,62
Tpm1-206ENSMUST00000113686 Crct1Q6PAI5 102 aa11,18□□□□□ -0,62
Tpm1-206ENSMUST00000113686 P01843 105 aa11,17□□□□□ -0,62
Tpm1-206ENSMUST00000113686 Defb47Q30KN1 79 aa11,17□□□□□ -0,62
Tpm1-206ENSMUST00000113686 9530003J23RikQ8BM26 151 aa11,17□□□□□ -0,62
Tpm1-206ENSMUST00000113686 Ifitm6A0A1B0GS75 124 aa11,13□□□□□ -0,63
Tpm1-206ENSMUST00000113686 Gm29423A0A087WRM1 55 aa11,12□□□□□ -0,63
Tpm1-206ENSMUST00000113686 Sfta2E9PXB6 77 aa11,12□□□□□ -0,63
Tpm1-206ENSMUST00000113686 Igkv8-28A0A0G2JE47 121 aa11,11□□□□□ -0,63
Tpm1-206ENSMUST00000113686 1700020N15RikL7MTX3 112 aa11,11□□□□□ -0,63
Tpm1-206ENSMUST00000113686 LorP18165 486 aa11,11□□□□□ -0,63
Tpm1-206ENSMUST00000113686 4930524J08RikQ9CUJ5 163 aa11,11□□□□□ -0,63
Tpm1-206ENSMUST00000113686 Gm11562A0PK51 136 aa11,1□□□□□ -0,63
Tpm1-206ENSMUST00000113686 CenpwQ3URR0 86 aa11,1□□□□□ -0,63
Tpm1-206ENSMUST00000113686 Rnf213E9Q555 5152 aaKnown RBP11,1□□□□□ -0,63
Tpm1-206ENSMUST00000113686 Smim13E9Q942 88 aa11,09□□□□□ -0,63
Tpm1-206ENSMUST00000113686 Gm12353A2AGJ4 60 aa11,06□□□□□ -0,64
Tpm1-206ENSMUST00000113686 Ccl17F6R5P4 103 aa11,06□□□□□ -0,64
Tpm1-206ENSMUST00000113686 Vps25Q9CQ80 176 aa11,05□□□□□ -0,64
Tpm1-206ENSMUST00000113686 Gm19402J3QJV4 266 aa11,03□□□□□ -0,64
Tpm1-206ENSMUST00000113686 Gm10308Q9CVR5 141 aa11,01□□□□□ -0,65
Tpm1-206ENSMUST00000113686 Gm26620Q9CY65 116 aa11□□□□□ -0,65
Tpm1-206ENSMUST00000113686 2310034C09RikQ9D746 214 aa10,99□□□□□ -0,65
Tpm1-206ENSMUST00000113686 Rpl37Q9D823 97 aa10,99□□□□□ -0,65
Tpm1-206ENSMUST00000113686 Cypt15B1AXS0 87 aa10,98□□□□□ -0,65
Tpm1-206ENSMUST00000113686 Ighv10-3A0A075B5T6 119 aa10,96□□□□□ -0,65
Tpm1-206ENSMUST00000113686 Cox6cQ9CPQ1 76 aa10,93□□□□□ -0,66
Tpm1-206ENSMUST00000113686 Krtap16-3Q8C1I6 86 aa10,9□□□□□ -0,66
Tpm1-206ENSMUST00000113686 Igkv8-30A0A140T8M3 121 aa10,89□□□□□ -0,67
Tpm1-206ENSMUST00000113686 Ube2v1Q9CZY3 147 aa10,89□□□□□ -0,67
Tpm1-206ENSMUST00000113686 Gm10061D3Z714 54 aa10,88□□□□□ -0,67
Tpm1-206ENSMUST00000113686 Gm10135F6TEE5 83 aa10,88□□□□□ -0,67
Tpm1-206ENSMUST00000113686 Sprr2jO70561 109 aa10,88□□□□□ -0,67
Retrieved 100 of 22,080 RNA–protein pairs in 60,3 ms