RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 Ep400Q8CHI8 3072 aaKnown RBP10,21□□□□□ -0,78
Ubr3-202ENSMUST00000112251 Cep350E9Q309 3095 aa10,19□□□□□ -0,78
Ubr3-202ENSMUST00000112251 Unc79Q0KK59 2596 aa10,19□□□□□ -0,78
Ubr3-202ENSMUST00000112251 Bahcc1Q3UHR0 2643 aa10,18□□□□□ -0,78
Ubr3-202ENSMUST00000112251 BC029722A0A0N4SW31 51 aa10,17□□□□□ -0,78
Ubr3-202ENSMUST00000112251 Gm10065F6TJM2 114 aa10,13□□□□□ -0,79
Ubr3-202ENSMUST00000112251 Gm9508A0A1W2P7W0 230 aa10,12□□□□□ -0,79
Ubr3-202ENSMUST00000112251 Gm7138L7N2C3 230 aa10,11□□□□□ -0,79
Ubr3-202ENSMUST00000112251 Gm3238W4VSP7 230 aa10,11□□□□□ -0,79
Ubr3-202ENSMUST00000112251 Prune2Q52KR3 3084 aa10,11□□□□□ -0,79
Ubr3-202ENSMUST00000112251 Stab1Q8R4Y4 2571 aa10,1□□□□□ -0,79
Ubr3-202ENSMUST00000112251 Gm9195A0A140LHT4 2805 aa10,09□□□□□ -0,79
Ubr3-202ENSMUST00000112251 2310050C09RikG5E8Z3 280 aa10,08□□□□□ -0,8
Ubr3-202ENSMUST00000112251 NipblQ6KCD5 2798 aaKnown RBP10,05□□□□□ -0,8
Ubr3-202ENSMUST00000112251 Ndufaf8A2AMZ4 74 aa10,02□□□□□ -0,8
Ubr3-202ENSMUST00000112251 Lama3Q61789 3330 aa10,02□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Unc80Q8BLN6 3261 aa10,01□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Gm7137J3QMW1 236 aa9,98□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Gm5767A0A0J9YTU8 78 aa9,98□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Ash1lQ99MY8 2958 aa9,97□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Gm10139O88245 57 aa9,97□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Celsr3Q91ZI0 3301 aa9,97□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Myo18bE9PV66 2605 aa9,96□□□□□ -0,81
Ubr3-202ENSMUST00000112251 Cystm1Q8K353 104 aa9,96□□□□□ -0,82
Ubr3-202ENSMUST00000112251 DspE9Q557 2883 aaKnown RBP9,93□□□□□ -0,82
Ubr3-202ENSMUST00000112251 9530053A07RikE9PVG8 2581 aa9,92□□□□□ -0,82
Ubr3-202ENSMUST00000112251 1700042G07RikB1AUF7 90 aa9,92□□□□□ -0,82
Ubr3-202ENSMUST00000112251 CenpfE9Q3P4 2997 aaKnown RBP9,92□□□□□ -0,82
Ubr3-202ENSMUST00000112251 Gm9112A2AI92 75 aa9,89□□□□□ -0,83
Ubr3-202ENSMUST00000112251 Lama1P19137 3084 aa9,87□□□□□ -0,83
Ubr3-202ENSMUST00000112251 Usp34Q6ZQ93 3582 aa9,87□□□□□ -0,83
Ubr3-202ENSMUST00000112251 Map1aQ9QYR6 2776 aa9,84□□□□□ -0,83
Ubr3-202ENSMUST00000112251 Gm16253D3Z167 63 aa9,82□□□□□ -0,84
Ubr3-202ENSMUST00000112251 Zfp292Q9Z2U2 2698 aa9,79□□□□□ -0,84
Ubr3-202ENSMUST00000112251 Vps13aQ5H8C4 3166 aa9,78□□□□□ -0,84
Ubr3-202ENSMUST00000112251 Zfhx3Q61329 3726 aa9,78□□□□□ -0,84
Ubr3-202ENSMUST00000112251 Cfap54Q8C6S9 3106 aa9,76□□□□□ -0,85
Ubr3-202ENSMUST00000112251 4933415A04RikQ9D443 101 aa9,75□□□□□ -0,85
Ubr3-202ENSMUST00000112251 Gm21887J3QQ04 176 aa9,75□□□□□ -0,85
Ubr3-202ENSMUST00000112251 TrioQ0KL02 3102 aa9,74□□□□□ -0,85
Ubr3-202ENSMUST00000112251 Gcn1E9PVA8 2671 aaKnown RBP9,73□□□□□ -0,85
Ubr3-202ENSMUST00000112251 Sprr1aQ62266 144 aa9,73□□□□□ -0,85
Ubr3-202ENSMUST00000112251 Cdh23Q99PF4 3354 aa9,73□□□□□ -0,85
Ubr3-202ENSMUST00000112251 Cox6b2Q80ZN9 88 aa9,72□□□□□ -0,85
Ubr3-202ENSMUST00000112251 Gm17349F7BGH6 99 aa9,71□□□□□ -0,85
Ubr3-202ENSMUST00000112251 Tnp1P10856 55 aa9,71□□□□□ -0,85
Ubr3-202ENSMUST00000112251 ApcQ61315 2845 aa9,71□□□□□ -0,86
Ubr3-202ENSMUST00000112251 AtmQ62388 3066 aa9,7□□□□□ -0,86
Ubr3-202ENSMUST00000112251 Frem2Q6NVD0 3160 aa9,69□□□□□ -0,86
Ubr3-202ENSMUST00000112251 KalrnA2CG49 2964 aa9,68□□□□□ -0,86
Ubr3-202ENSMUST00000112251 Krtap29-1A2A5X4 342 aa9,67□□□□□ -0,86
Ubr3-202ENSMUST00000112251 A730071L15RikQ8C4X0 137 aa9,66□□□□□ -0,86
Ubr3-202ENSMUST00000112251 Dmxl2Q8BPN8 3032 aa9,65□□□□□ -0,86
Ubr3-202ENSMUST00000112251 Chd6A3KFM7 2711 aa9,65□□□□□ -0,87
Ubr3-202ENSMUST00000112251 FryE9Q8I9 3020 aa9,64□□□□□ -0,87
Ubr3-202ENSMUST00000112251 Krtap13O88375 197 aa9,63□□□□□ -0,87
Ubr3-202ENSMUST00000112251 FlnaQ8BTM8 2647 aaKnown RBP9,61□□□□□ -0,87
Ubr3-202ENSMUST00000112251 Igsf10Q3V1M1 2594 aa9,61□□□□□ -0,87
Ubr3-202ENSMUST00000112251 AtrQ9JKK8 2635 aa9,61□□□□□ -0,87
Ubr3-202ENSMUST00000112251 HttP42859 3119 aa9,59□□□□□ -0,87
Ubr3-202ENSMUST00000112251 Dmxl1Q6PNC0 3013 aa9,57□□□□□ -0,88
Ubr3-202ENSMUST00000112251 Krtap14O08640 167 aa9,52□□□□□ -0,89
Ubr3-202ENSMUST00000112251 Brca2P97929 3329 aa9,52□□□□□ -0,89
Ubr3-202ENSMUST00000112251 Myo15bI7HPW8 3033 aa9,49□□□□□ -0,89
Ubr3-202ENSMUST00000112251 Gm7173A0A0G2JEB6 3132 aa9,49□□□□□ -0,89
Ubr3-202ENSMUST00000112251 Gm36176A0A1W2P8D5 158 aa9,47□□□□□ -0,89
Ubr3-202ENSMUST00000112251 Wdfy4E9Q2M9 3149 aa9,45□□□□□ -0,9
Ubr3-202ENSMUST00000112251 Lelp1Q9DAE3 120 aa9,44□□□□□ -0,9
Ubr3-202ENSMUST00000112251 FlnbQ80X90 2602 aaKnown RBP9,43□□□□□ -0,9
Ubr3-202ENSMUST00000112251 Ubr5Q80TP3 2792 aa9,43□□□□□ -0,9
Ubr3-202ENSMUST00000112251 Szt2A2A9C3 3431 aa9,4□□□□□ -0,9
Ubr3-202ENSMUST00000112251 Utp20Q5XG71 2788 aaKnown RBP9,4□□□□□ -0,9
Ubr3-202ENSMUST00000112251 Col6a3E9PWQ3 3284 aa9,35□□□□□ -0,91
Ubr3-202ENSMUST00000112251 Gm9507D3Z5T3 223 aa9,34□□□□□ -0,91
Ubr3-202ENSMUST00000112251 Stab2Q8R4U0 2559 aa9,34□□□□□ -0,91
Ubr3-202ENSMUST00000112251 Mast4Q811L6 2618 aa9,33□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Gm2310J3QNJ2 377 aa9,32□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Dchs2A0A0A6YW72 3346 aa9,32□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Tep1P97499 2629 aa9,32□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Chd7A2AJK6 2986 aaKnown RBP9,31□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Akap9Q70FJ1 3797 aa9,31□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Gm40193A0A1B0GT39 78 aa9,31□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Col12a1Q60847 3120 aa9,29□□□□□ -0,92
Ubr3-202ENSMUST00000112251 FrylF8VQ05 3007 aa9,29□□□□□ -0,92
Ubr3-202ENSMUST00000112251 Rev3lQ61493 3122 aa9,27□□□□□ -0,93
Ubr3-202ENSMUST00000112251 Itpr2Q9Z329 2701 aa9,27□□□□□ -0,93
Ubr3-202ENSMUST00000112251 Krtap10-4Q08EG8 221 aa9,26□□□□□ -0,93
Ubr3-202ENSMUST00000112251 SpegQ62407 3262 aa9,26□□□□□ -0,93
Ubr3-202ENSMUST00000112251 Myo15aQ9QZZ4 3511 aa9,25□□□□□ -0,93
Ubr3-202ENSMUST00000112251 Pkd1l1Q8R526 2615 aa9,25□□□□□ -0,93
Ubr3-202ENSMUST00000112251 2310057N15RikQ9D6T8 200 aa9,23□□□□□ -0,93
Ubr3-202ENSMUST00000112251 Rps29P62274 56 aa9,18□□□□□ -0,94
Ubr3-202ENSMUST00000112251 MgaA2AWL7 3003 aaKnown RBP9,18□□□□□ -0,94
Ubr3-202ENSMUST00000112251 AspmQ8CJ27 3122 aa9,18□□□□□ -0,94
Ubr3-202ENSMUST00000112251 D6Ertd527eA0A0N4SWI3 464 aa9,17□□□□□ -0,94
Ubr3-202ENSMUST00000112251 Chd9Q8BYH8 2885 aa9,17□□□□□ -0,94
Ubr3-202ENSMUST00000112251 SmcpP15265 143 aa9,17□□□□□ -0,94
Ubr3-202ENSMUST00000112251 Gm5965D3Z724 196 aa9,16□□□□□ -0,94
Ubr3-202ENSMUST00000112251 Lrrc37aB1AWG4 3215 aa9,15□□□□□ -0,94
Ubr3-202ENSMUST00000112251 VcanQ62059 3357 aa9,15□□□□□ -0,94
Retrieved 100 of 22,080 RNA–protein pairs in 34,6 ms