RNA–Protein interactions for RNA: ENSMUST00000111561.7

Clip1-203, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clip1, Length 5,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-203ENSMUST00000111561 Rpl37Q9D823 97 aa6.29□□□□□ -1.4
Clip1-203ENSMUST00000111561 Gcn1E9PVA8 2671 aaKnown RBP6.28□□□□□ -1.4
Clip1-203ENSMUST00000111561 Akap13E9Q394 2776 aa6.28□□□□□ -1.4
Clip1-203ENSMUST00000111561 A730071L15RikQ8C4X0 137 aa6.28□□□□□ -1.4
Clip1-203ENSMUST00000111561 4933415A04RikQ9D443 101 aa6.27□□□□□ -1.41
Clip1-203ENSMUST00000111561 Gm16253D3Z167 63 aa6.26□□□□□ -1.41
Clip1-203ENSMUST00000111561 Sprr1aQ62266 144 aa6.25□□□□□ -1.41
Clip1-203ENSMUST00000111561 Prrc2cQ3TLH4 2846 aaKnown RBP6.24□□□□□ -1.41
Clip1-203ENSMUST00000111561 Gm36176A0A1W2P8D5 158 aa6.24□□□□□ -1.41
Clip1-203ENSMUST00000111561 Lelp1Q9DAE3 120 aa6.22□□□□□ -1.41
Clip1-203ENSMUST00000111561 Notch1Q01705 2531 aa6.21□□□□□ -1.42
Clip1-203ENSMUST00000111561 FlnaQ8BTM8 2647 aaKnown RBP6.21□□□□□ -1.42
Clip1-203ENSMUST00000111561 Gm10382Q3V0T5 144 aa6.2□□□□□ -1.42
Clip1-203ENSMUST00000111561 Gm11565A2A4M7 156 aa6.2□□□□□ -1.42
Clip1-203ENSMUST00000111561 Mast4Q811L6 2618 aa6.2□□□□□ -1.42
Clip1-203ENSMUST00000111561 Ep400Q8CHI8 3072 aaKnown RBP6.2□□□□□ -1.42
Clip1-203ENSMUST00000111561 UtrnE9Q6R7 3430 aa6.19□□□□□ -1.42
Clip1-203ENSMUST00000111561 Gm9508A0A1W2P7W0 230 aa6.18□□□□□ -1.42
Clip1-203ENSMUST00000111561 PcntP48725 2898 aa6.18□□□□□ -1.42
Clip1-203ENSMUST00000111561 Igsf10Q3V1M1 2594 aa6.16□□□□□ -1.42
Clip1-203ENSMUST00000111561 Gm19426M0QWC7 77 aa6.16□□□□□ -1.42
Clip1-203ENSMUST00000111561 Gm5767A0A0J9YTU8 78 aa6.16□□□□□ -1.42
Clip1-203ENSMUST00000111561 Stab1Q8R4Y4 2571 aa6.13□□□□□ -1.43
Clip1-203ENSMUST00000111561 BC029722A0A0N4SW31 51 aa6.12□□□□□ -1.43
Clip1-203ENSMUST00000111561 Map1aQ9QYR6 2776 aa6.08□□□□□ -1.44
Clip1-203ENSMUST00000111561 Itpr3P70227 2670 aa6.08□□□□□ -1.44
Clip1-203ENSMUST00000111561 NipblQ6KCD5 2798 aaKnown RBP6.08□□□□□ -1.44
Clip1-203ENSMUST00000111561 Krtap13O88375 197 aa6.06□□□□□ -1.44
Clip1-203ENSMUST00000111561 Krtap29-1A2A5X4 342 aa6.06□□□□□ -1.44
Clip1-203ENSMUST00000111561 9530053A07RikE9PVG8 2581 aa6.05□□□□□ -1.44
Clip1-203ENSMUST00000111561 Cox6b2Q80ZN9 88 aa6.04□□□□□ -1.44
Clip1-203ENSMUST00000111561 Gm9507D3Z5T3 223 aa6.01□□□□□ -1.45
Clip1-203ENSMUST00000111561 Gm42715A0A087WP63 3095 aaKnown RBP6.01□□□□□ -1.45
Clip1-203ENSMUST00000111561 2310050C09RikG5E8Z3 280 aa6□□□□□ -1.45
Clip1-203ENSMUST00000111561 Gm2310J3QNJ2 377 aa5.99□□□□□ -1.45
Clip1-203ENSMUST00000111561 Gm9195A0A140LHT4 2805 aa5.97□□□□□ -1.45
Clip1-203ENSMUST00000111561 Cep350E9Q309 3095 aa5.96□□□□□ -1.45
Clip1-203ENSMUST00000111561 Dnah12Q3V0Q1 3086 aa5.96□□□□□ -1.46
Clip1-203ENSMUST00000111561 Tnp2P11378 117 aa5.96□□□□□ -1.46
Clip1-203ENSMUST00000111561 Ndufaf8A2AMZ4 74 aa5.96□□□□□ -1.46
Clip1-203ENSMUST00000111561 TrioQ0KL02 3102 aa5.95□□□□□ -1.46
Clip1-203ENSMUST00000111561 Chd6A3KFM7 2711 aa5.95□□□□□ -1.46
Clip1-203ENSMUST00000111561 Krtap10-4Q08EG8 221 aa5.92□□□□□ -1.46
Clip1-203ENSMUST00000111561 Lama3Q61789 3330 aa5.9□□□□□ -1.46
Clip1-203ENSMUST00000111561 Prune2Q52KR3 3084 aa5.89□□□□□ -1.47
Clip1-203ENSMUST00000111561 Itpr1P11881 2749 aa5.88□□□□□ -1.47
Clip1-203ENSMUST00000111561 Krtap14O08640 167 aa5.87□□□□□ -1.47
Clip1-203ENSMUST00000111561 Krtap10-10A0A1W2P7T6 217 aa5.87□□□□□ -1.47
Clip1-203ENSMUST00000111561 Tep1P97499 2629 aa5.86□□□□□ -1.47
Clip1-203ENSMUST00000111561 Rps29P62274 56 aa5.84□□□□□ -1.47
Clip1-203ENSMUST00000111561 Usp34Q6ZQ93 3582 aa5.84□□□□□ -1.47
Clip1-203ENSMUST00000111561 Ubr5Q80TP3 2792 aa5.84□□□□□ -1.47
Clip1-203ENSMUST00000111561 Lama2Q60675 3118 aaKnown RBP5.84□□□□□ -1.47
Clip1-203ENSMUST00000111561 Tnrc18Q80WC3 2878 aa5.83□□□□□ -1.48
Clip1-203ENSMUST00000111561 Gm9112A2AI92 75 aa5.81□□□□□ -1.48
Clip1-203ENSMUST00000111561 D6Ertd527eA0A0N4SWI3 464 aa5.81□□□□□ -1.48
Clip1-203ENSMUST00000111561 Ash1lQ99MY8 2958 aa5.8□□□□□ -1.48
Clip1-203ENSMUST00000111561 Stab2Q8R4U0 2559 aa5.8□□□□□ -1.48
Clip1-203ENSMUST00000111561 Jbts17Q8CE72 3214 aa5.8□□□□□ -1.48
Clip1-203ENSMUST00000111561 Pkd1l1Q8R526 2615 aa5.8□□□□□ -1.48
Clip1-203ENSMUST00000111561 Nbeal2Q6ZQA0 2742 aa5.8□□□□□ -1.48
Clip1-203ENSMUST00000111561 Gm21887J3QQ04 176 aa5.78□□□□□ -1.48
Clip1-203ENSMUST00000111561 Utp20Q5XG71 2788 aaKnown RBP5.77□□□□□ -1.49
Clip1-203ENSMUST00000111561 Cfap54Q8C6S9 3106 aa5.75□□□□□ -1.49
Clip1-203ENSMUST00000111561 2310061N02RikQ9D6S9 174 aa5.73□□□□□ -1.49
Clip1-203ENSMUST00000111561 Dmxl1Q6PNC0 3013 aa5.72□□□□□ -1.49
Clip1-203ENSMUST00000111561 Gm40193A0A1B0GT39 78 aa5.71□□□□□ -1.5
Clip1-203ENSMUST00000111561 Gm2696A0A1W2P709 240 aa5.71□□□□□ -1.5
Clip1-203ENSMUST00000111561 Col6a5A6H584 2640 aa5.7□□□□□ -1.5
Clip1-203ENSMUST00000111561 Tnp1P10856 55 aa5.69□□□□□ -1.5
Clip1-203ENSMUST00000111561 Tex15F8VPN2 2785 aa5.69□□□□□ -1.5
Clip1-203ENSMUST00000111561 Bod1lE9Q6J5 3032 aa5.68□□□□□ -1.5
Clip1-203ENSMUST00000111561 Myo15bI7HPW8 3033 aa5.67□□□□□ -1.5
Clip1-203ENSMUST00000111561 FcgbpE9Q0B5 2583 aa5.67□□□□□ -1.5
Clip1-203ENSMUST00000111561 Chd7A2AJK6 2986 aaKnown RBP5.67□□□□□ -1.5
Clip1-203ENSMUST00000111561 2310057N15RikQ9D6T8 200 aa5.66□□□□□ -1.5
Clip1-203ENSMUST00000111561 Fbn2Q61555 2907 aa5.66□□□□□ -1.5
Clip1-203ENSMUST00000111561 Mki67E9PVX6 3177 aaKnown RBP5.64□□□□□ -1.51
Clip1-203ENSMUST00000111561 Frem2Q6NVD0 3160 aa5.64□□□□□ -1.51
Clip1-203ENSMUST00000111561 Ranbp2Q9ERU9 3053 aaKnown RBP5.63□□□□□ -1.51
Clip1-203ENSMUST00000111561 MgaA2AWL7 3003 aaKnown RBP5.62□□□□□ -1.51
Clip1-203ENSMUST00000111561 A930033H14RikG5E8X6 103 aa5.61□□□□□ -1.51
Clip1-203ENSMUST00000111561 Gm7173A0A0G2JEB6 3132 aa5.59□□□□□ -1.51
Clip1-203ENSMUST00000111561 TgO08710 2766 aa5.59□□□□□ -1.51
Clip1-203ENSMUST00000111561 Gm5965D3Z724 196 aa5.58□□□□□ -1.52
Clip1-203ENSMUST00000111561 Hivep1Q03172 2688 aa5.55□□□□□ -1.52
Clip1-203ENSMUST00000111561 Cdh23Q99PF4 3354 aa5.55□□□□□ -1.52
Clip1-203ENSMUST00000111561 Gm20537G3UYK7 97 aa5.55□□□□□ -1.52
Clip1-203ENSMUST00000111561 Unc80Q8BLN6 3261 aa5.54□□□□□ -1.52
Clip1-203ENSMUST00000111561 Rev3lQ61493 3122 aa5.52□□□□□ -1.53
Clip1-203ENSMUST00000111561 Vps13aQ5H8C4 3166 aa5.51□□□□□ -1.53
Clip1-203ENSMUST00000111561 KalrnA2CG49 2964 aa5.51□□□□□ -1.53
Clip1-203ENSMUST00000111561 Igfn1Q3KNY0 2849 aa5.5□□□□□ -1.53
Clip1-203ENSMUST00000111561 DspE9Q557 2883 aaKnown RBP5.5□□□□□ -1.53
Clip1-203ENSMUST00000111561 Itpr2Q9Z329 2701 aa5.49□□□□□ -1.53
Clip1-203ENSMUST00000111561 ApcQ61315 2845 aa5.49□□□□□ -1.53
Clip1-203ENSMUST00000111561 Muc2Q80Z19 2680 aa5.48□□□□□ -1.53
Clip1-203ENSMUST00000111561 Col12a1Q60847 3120 aa5.48□□□□□ -1.53
Clip1-203ENSMUST00000111561 Srrm2Q8BTI8 2703 aaKnown RBP5.46□□□□□ -1.54
Clip1-203ENSMUST00000111561 Tenm4Q3UHK6 2771 aa5.45□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 117.5 ms