RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 Mrpl34Q99N91 92 aa5.41□□□□□ -1.54
Bdnf-208ENSMUST00000111049 AplnQ9R0R4 77 aa5.41□□□□□ -1.54
Bdnf-208ENSMUST00000111049 C130032M10RikQ8C888 123 aa5.41□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Nsd1O88491 2588 aaKnown RBP5.41□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Vpreb3D3Z6J4 130 aa5.41□□□□□ -1.54
Bdnf-208ENSMUST00000111049 Smim29Q8R043 75 aa5.4□□□□□ -1.54
Bdnf-208ENSMUST00000111049 6430550D23RikE9Q1X6 194 aa5.4□□□□□ -1.54
Bdnf-208ENSMUST00000111049 HrnrQ8VHD8 2496 aa5.39□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Itpr2Q9Z329 2701 aa5.39□□□□□ -1.55
Bdnf-208ENSMUST00000111049 A030003K21RikA0A1Y7VIM3 128 aa5.39□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Gm6217A0A1Y7VJK9 128 aa5.39□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Gm44790A0A0N4SV91 103 aa5.39□□□□□ -1.55
Bdnf-208ENSMUST00000111049 ApcQ61315 2845 aa5.39□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Igkv3-4A0A140T8Q4 119 aa5.38□□□□□ -1.55
Bdnf-208ENSMUST00000111049 PscaP57096 123 aa5.38□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Wfdc13Q5DQQ6 81 aa5.38□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Fam168bQ80XQ8 194 aa5.38□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Coa6Q8BGD8 79 aa5.38□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Dph3Q8K0W9 82 aa5.38□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Igkv3-12A0A140T8P0 119 aa5.38□□□□□ -1.55
Bdnf-208ENSMUST00000111049 A530084C06RikQ3UTW2 186 aa5.37□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Col6a5A6H584 2640 aa5.37□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Atox1O08997 68 aaKnown RBP5.37□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Prol1E9PYQ4 312 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Phxr5P08399 672 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 P84750 121 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 A930002H24RikQ8C8Y3 163 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 SycnQ8VCK7 134 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 CubnQ9JLB4 3623 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Hivep1Q03172 2688 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Igkv8-19A0A0G2JFN8 121 aa5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Fn1P11276 2477 aaKnown RBP5.36□□□□□ -1.55
Bdnf-208ENSMUST00000111049 9530053A07RikE9PVG8 2581 aa5.35□□□□□ -1.55
Bdnf-208ENSMUST00000111049 1700018G05RikA0A1B0GSI2 66 aa5.35□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Gm5617Q91VN2 117 aa5.35□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Ube2aQ9Z255 152 aa5.35□□□□□ -1.55
Bdnf-208ENSMUST00000111049 A0A286YE49 62 aa5.34□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Gm21886J3QJU9 214 aa5.34□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Gm7138L7N2C3 230 aa5.34□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Gm3238W4VSP7 230 aa5.34□□□□□ -1.55
Bdnf-208ENSMUST00000111049 Wfdc10Q3V2J9 124 aa5.33□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Ank2Q8C8R3 3898 aa5.33□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Q8BT88 171 aa5.33□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Reg3aO09037 175 aa5.32□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Gm28230A0A0A0MQ91 144 aa5.31□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Igkv3-10A0A0G2JGN0 119 aa5.31□□□□□ -1.56
Bdnf-208ENSMUST00000111049 1700012A03RikQ9DAF1 130 aa5.31□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Tenm4Q3UHK6 2771 aa5.31□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Igkv3-5A0A140T8M6 119 aa5.31□□□□□ -1.56
Bdnf-208ENSMUST00000111049 A0A286YCP9 139 aa5.31□□□□□ -1.56
Bdnf-208ENSMUST00000111049 BsnO88737 3942 aa5.3□□□□□ -1.56
Bdnf-208ENSMUST00000111049 1700074P13RikQ9D9G7 251 aa5.3□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Gm19402J3QJV4 266 aa5.28□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Chchd10Q7TNL9 138 aa5.28□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Sprr1aQ62266 144 aa5.28□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Cdc42se1Q8BHL7 80 aa5.28□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Spint4Q9D263 159 aa5.28□□□□□ -1.56
Bdnf-208ENSMUST00000111049 Xirp2Q4U4S6 3784 aa5.27□□□□□ -1.57
Bdnf-208ENSMUST00000111049 U90926O08546 118 aa5.27□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Fbn1Q61554 2873 aaKnown RBP5.26□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Igkv3-7A0A0G2JE31 119 aa5.26□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Fam104aA2A6P4 185 aa5.26□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Nupr2Q497P3 102 aa5.25□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Tenm1Q9WTS4 2731 aa5.25□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Coa5Q99M07 74 aa5.25□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Q8K1L6 76 aa5.25□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Srrm2Q8BTI8 2703 aaKnown RBP5.25□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Gm10267M0QWD8 85 aa5.24□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Rpl37aP61514 92 aa5.24□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Phf5aP83870 110 aaKnown RBP5.24□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Gm10837Q3UTT8 145 aa5.24□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Gm7137J3QMW1 236 aa5.23□□□□□ -1.57
Bdnf-208ENSMUST00000111049 AI606181Q8C7B9 129 aa5.23□□□□□ -1.57
Bdnf-208ENSMUST00000111049 TgO08710 2766 aa5.22□□□□□ -1.57
Bdnf-208ENSMUST00000111049 Gm37013Q8K491 104 aa5.21□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Gm10160F6Y577 67 aa5.2□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Zcchc13Q9D548 170 aa5.2□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Stab2Q8R4U0 2559 aa5.2□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Defb10Q8R2I8 73 aa5.19□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Defb38Q7TNV7 63 aa5.18□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Wfdc17Q5SSJ1 76 aa5.17□□□□□ -1.58
Bdnf-208ENSMUST00000111049 AW011738F6S7Q2 159 aa5.17□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Gm10139O88245 57 aa5.16□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Krtap10-4Q08EG8 221 aa5.16□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Gm10642Q3TWM1 71 aa5.16□□□□□ -1.58
Bdnf-208ENSMUST00000111049 FasnP19096 2504 aaKnown RBP5.16□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Gm27235Q3UW50 83 aa5.16□□□□□ -1.58
Bdnf-208ENSMUST00000111049 Odf3bQ5M8M2 238 aa5.15□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Spata3Q9D9T6 193 aa5.15□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Gm4707V9GXN5 68 aa5.15□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Igsf10Q3V1M1 2594 aa5.15□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Defb9Q8R2I6 67 aa5.14□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Hspg2Q05793 3707 aaKnown RBP5.14□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Chtf8P0CG14 533 aa5.14□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Phxr4P15974 95 aa5.14□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Znf706Q9D115 76 aaKnown RBP5.14□□□□□ -1.59
Bdnf-208ENSMUST00000111049 SptssbQ925E8 76 aa5.14□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Pkd1l1Q8R526 2615 aa5.13□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Adm2Q7TNK8 150 aa5.12□□□□□ -1.59
Bdnf-208ENSMUST00000111049 Defb13Q8R2I4 64 aa5.12□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 67.3 ms