RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Col7a1Q63870 2944 aa4.92□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Reg3aO09037 175 aa4.91□□□□□ -1.62
Bdnf-204ENSMUST00000111044 Ndufs5Q99LY9 106 aa4.91□□□□□ -1.62
Bdnf-204ENSMUST00000111044 PscaP57096 123 aa4.9□□□□□ -1.62
Bdnf-204ENSMUST00000111044 NipblQ6KCD5 2798 aaKnown RBP4.9□□□□□ -1.62
Bdnf-204ENSMUST00000111044 CubnQ9JLB4 3623 aa4.89□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Gm3250E9Q1M3 230 aa4.89□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Gm20661K7N787 53 aa4.89□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Phxr5P08399 672 aa4.89□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Hivep3A2A884 2348 aa4.89□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Akap13E9Q394 2776 aa4.89□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Gm37013Q8K491 104 aa4.89□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Gm10267M0QWD8 85 aa4.88□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Chtf8P0CG14 533 aa4.88□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Wfdc13Q5DQQ6 81 aa4.88□□□□□ -1.63
Bdnf-204ENSMUST00000111044 1700018G05RikA0A1B0GSI2 66 aa4.88□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Dmac1Q9CQ00 111 aa4.88□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Ighv8-13A0A075B5Y0 101 aa4.87□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Helz2E9QAM5 2947 aaKnown RBP4.87□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Limd2Q8BGB5 128 aa4.87□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Reg3bP35230 175 aa4.86□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Xirp2Q4U4S6 3784 aa4.86□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Sprr4Q8CGN8 76 aa4.85□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Obox2E9PXV9 151 aa4.85□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Erdr1J3QMM0 206 aa4.85□□□□□ -1.63
Bdnf-204ENSMUST00000111044 BsnO88737 3942 aa4.85□□□□□ -1.63
Bdnf-204ENSMUST00000111044 D730001G18RikA0A087WQU7 115 aa4.84□□□□□ -1.63
Bdnf-204ENSMUST00000111044 Gm28230A0A0A0MQ91 144 aa4.84□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Chchd10Q7TNL9 138 aa4.84□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Zcchc13Q9D548 170 aa4.84□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Gm3233E9Q2H5 230 aa4.83□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Ank2Q8C8R3 3898 aa4.83□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Prol1E9PYQ4 312 aa4.82□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Rpl37aP61514 92 aa4.82□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Igkv3-7A0A0G2JE31 119 aa4.81□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Gm9821Q8K076 103 aa4.81□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Gm11627A6PWP4 55 aa4.81□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Defb38Q7TNV7 63 aa4.8□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Wfdc6bF6ULY1 148 aa4.8□□□□□ -1.64
Bdnf-204ENSMUST00000111044 P84750 121 aa4.8□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Igkv3-12A0A140T8P0 119 aa4.8□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Krtap24-1G3X9A2 248 aa4.8□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Uqcr11Q9CPX8 56 aa4.79□□□□□ -1.64
Bdnf-204ENSMUST00000111044 Snhg11Q4G0K9 87 aa4.79□□□□□ -1.64
Bdnf-204ENSMUST00000111044 OxtP35454 125 aa4.77□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Gm16485Q8C4B7 115 aa4.77□□□□□ -1.65
Bdnf-204ENSMUST00000111044 CicQ924A2 2510 aa4.76□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Cypt15B1AXS0 87 aa4.75□□□□□ -1.65
Bdnf-204ENSMUST00000111044 AtrQ9JKK8 2635 aa4.75□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Tex15F8VPN2 2785 aa4.75□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Fam168bQ80XQ8 194 aa4.75□□□□□ -1.65
Bdnf-204ENSMUST00000111044 1700012A03RikQ9DAF1 130 aa4.74□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Q8BGJ3 129 aa4.74□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Hspg2Q05793 3707 aaKnown RBP4.74□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Gm12216A0A1W2P827 62 aa4.73□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Fbn1Q61554 2873 aaKnown RBP4.72□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Igkv3-5A0A140T8M6 119 aa4.72□□□□□ -1.65
Bdnf-204ENSMUST00000111044 Nbeal2Q6ZQA0 2742 aa4.71□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Gm2310J3QNJ2 377 aa4.71□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Wfdc10Q3V2J9 124 aa4.71□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Tenm4Q3UHK6 2771 aa4.7□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Spata3Q9D9T6 193 aa4.7□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Notch2O35516 2470 aa4.7□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Cypt14J3QPF7 87 aa4.69□□□□□ -1.66
Bdnf-204ENSMUST00000111044 2310034C09RikQ9D746 214 aa4.69□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Plac8Q9JI48 112 aa4.69□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Stab1Q8R4Y4 2571 aa4.69□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Itpr2Q9Z329 2701 aa4.68□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Odf3bQ5M8M2 238 aa4.68□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Hivep1Q03172 2688 aa4.67□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Tenm1Q9WTS4 2731 aa4.67□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Sprr1aQ62266 144 aa4.66□□□□□ -1.66
Bdnf-204ENSMUST00000111044 Notch1Q01705 2531 aa4.66□□□□□ -1.66
Bdnf-204ENSMUST00000111044 PolqQ8CGS6 2544 aa4.66□□□□□ -1.66
Bdnf-204ENSMUST00000111044 PtprqP0C5E4 2300 aa4.65□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Nsd1O88491 2588 aaKnown RBP4.65□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Q8K1L6 76 aa4.65□□□□□ -1.67
Bdnf-204ENSMUST00000111044 SycnQ8VCK7 134 aa4.65□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Gm10139O88245 57 aa4.65□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Gm4707V9GXN5 68 aa4.64□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Gm7138L7N2C3 230 aa4.64□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Gm3238W4VSP7 230 aa4.64□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Gm11939A2A592 99 aa4.63□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Defb13Q8R2I4 64 aa4.63□□□□□ -1.67
Bdnf-204ENSMUST00000111044 AplnQ9R0R4 77 aa4.62□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Gm21798J3QNU5 87 aa4.61□□□□□ -1.67
Bdnf-204ENSMUST00000111044 9530053A07RikE9PVG8 2581 aa4.61□□□□□ -1.67
Bdnf-204ENSMUST00000111044 HrnrQ8VHD8 2496 aa4.6□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Srrm2Q8BTI8 2703 aaKnown RBP4.59□□□□□ -1.67
Bdnf-204ENSMUST00000111044 Col6a5A6H584 2640 aa4.59□□□□□ -1.68
Bdnf-204ENSMUST00000111044 ApcQ61315 2845 aa4.58□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Gm20538F6Z9R1 75 aa4.58□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Gm7137J3QMW1 236 aa4.58□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Mp68P56379 58 aa4.58□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Fn1P11276 2477 aaKnown RBP4.57□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Gm36176A0A1W2P8D5 158 aa4.56□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Sslp1Q3UN54 99 aa4.56□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Gm27235Q3UW50 83 aa4.56□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Pla2g10Q9QXX3 151 aa4.56□□□□□ -1.68
Bdnf-204ENSMUST00000111044 Znf706Q9D115 76 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 70.9 ms