RNA–Protein interactions for RNA: ENSMUST00000105840.7

Usp48-205, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp48, Length 5,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-205ENSMUST00000105840 Gm9195A0A140LHT4 2805 aa13.06□□□□□ -0.32
Usp48-205ENSMUST00000105840 Prune2Q52KR3 3084 aa13.05□□□□□ -0.32
Usp48-205ENSMUST00000105840 FlnaQ8BTM8 2647 aaKnown RBP13.05□□□□□ -0.32
Usp48-205ENSMUST00000105840 Gm16253D3Z167 63 aa13.04□□□□□ -0.32
Usp48-205ENSMUST00000105840 TrioQ0KL02 3102 aa13.03□□□□□ -0.32
Usp48-205ENSMUST00000105840 OxtP35454 125 aa13□□□□□ -0.33
Usp48-205ENSMUST00000105840 UtrnE9Q6R7 3430 aa12.97□□□□□ -0.33
Usp48-205ENSMUST00000105840 Spink7Q6IE32 76 aa12.96□□□□□ -0.33
Usp48-205ENSMUST00000105840 Fn1P11276 2477 aaKnown RBP12.96□□□□□ -0.34
Usp48-205ENSMUST00000105840 FasnP19096 2504 aaKnown RBP12.93□□□□□ -0.34
Usp48-205ENSMUST00000105840 Notch1Q01705 2531 aa12.89□□□□□ -0.35
Usp48-205ENSMUST00000105840 Bod1lE9Q6J5 3032 aa12.87□□□□□ -0.35
Usp48-205ENSMUST00000105840 AtrQ9JKK8 2635 aa12.87□□□□□ -0.35
Usp48-205ENSMUST00000105840 Romo1P60603 79 aa12.83□□□□□ -0.36
Usp48-205ENSMUST00000105840 Map1aQ9QYR6 2776 aa12.82□□□□□ -0.36
Usp48-205ENSMUST00000105840 Krtap15-1Q9QZU5 150 aa12.8□□□□□ -0.36
Usp48-205ENSMUST00000105840 Rpl37Q9D823 97 aa12.79□□□□□ -0.36
Usp48-205ENSMUST00000105840 Lama3Q61789 3330 aa12.77□□□□□ -0.37
Usp48-205ENSMUST00000105840 Kmt2bO08550 2713 aa12.74□□□□□ -0.37
Usp48-205ENSMUST00000105840 FlnbQ80X90 2602 aaKnown RBP12.71□□□□□ -0.37
Usp48-205ENSMUST00000105840 Gm2310J3QNJ2 377 aa12.68□□□□□ -0.38
Usp48-205ENSMUST00000105840 Lama2Q60675 3118 aaKnown RBP12.67□□□□□ -0.38
Usp48-205ENSMUST00000105840 Krtap29-1A2A5X4 342 aa12.66□□□□□ -0.38
Usp48-205ENSMUST00000105840 Gm10382Q3V0T5 144 aa12.66□□□□□ -0.38
Usp48-205ENSMUST00000105840 NipblQ6KCD5 2798 aaKnown RBP12.64□□□□□ -0.39
Usp48-205ENSMUST00000105840 Camk2n1Q6QWF9 78 aa12.64□□□□□ -0.39
Usp48-205ENSMUST00000105840 Gm17349F7BGH6 99 aa12.64□□□□□ -0.39
Usp48-205ENSMUST00000105840 Gm36176A0A1W2P8D5 158 aa12.63□□□□□ -0.39
Usp48-205ENSMUST00000105840 Mki67E9PVX6 3177 aaKnown RBP12.63□□□□□ -0.39
Usp48-205ENSMUST00000105840 Tnrc18Q80WC3 2878 aa12.59□□□□□ -0.39
Usp48-205ENSMUST00000105840 Ranbp2Q9ERU9 3053 aaKnown RBP12.58□□□□□ -0.4
Usp48-205ENSMUST00000105840 Cfap54Q8C6S9 3106 aa12.57□□□□□ -0.4
Usp48-205ENSMUST00000105840 Stab1Q8R4Y4 2571 aa12.56□□□□□ -0.4
Usp48-205ENSMUST00000105840 2310050C09RikG5E8Z3 280 aa12.56□□□□□ -0.4
Usp48-205ENSMUST00000105840 Chd7A2AJK6 2986 aaKnown RBP12.55□□□□□ -0.4
Usp48-205ENSMUST00000105840 Col12a1Q60847 3120 aa12.54□□□□□ -0.4
Usp48-205ENSMUST00000105840 Ash1lQ99MY8 2958 aa12.53□□□□□ -0.4
Usp48-205ENSMUST00000105840 Dmxl1Q6PNC0 3013 aa12.51□□□□□ -0.41
Usp48-205ENSMUST00000105840 Hectd1Q69ZR2 2618 aaKnown RBP12.51□□□□□ -0.41
Usp48-205ENSMUST00000105840 Krtap13O88375 197 aa12.5□□□□□ -0.41
Usp48-205ENSMUST00000105840 Akap13E9Q394 2776 aa12.48□□□□□ -0.41
Usp48-205ENSMUST00000105840 Gm5767A0A0J9YTU8 78 aa12.45□□□□□ -0.42
Usp48-205ENSMUST00000105840 Fam229aB2KGE5 128 aa12.37□□□□□ -0.43
Usp48-205ENSMUST00000105840 Chd6A3KFM7 2711 aa12.37□□□□□ -0.43
Usp48-205ENSMUST00000105840 BC029722A0A0N4SW31 51 aa12.35□□□□□ -0.43
Usp48-205ENSMUST00000105840 Gm19426M0QWC7 77 aa12.35□□□□□ -0.43
Usp48-205ENSMUST00000105840 Gm7173A0A0G2JEB6 3132 aa12.3□□□□□ -0.44
Usp48-205ENSMUST00000105840 Fbn2Q61555 2907 aa12.29□□□□□ -0.44
Usp48-205ENSMUST00000105840 Krtap14O08640 167 aa12.29□□□□□ -0.44
Usp48-205ENSMUST00000105840 Usp34Q6ZQ93 3582 aa12.29□□□□□ -0.44
Usp48-205ENSMUST00000105840 Cox6b2Q80ZN9 88 aa12.28□□□□□ -0.44
Usp48-205ENSMUST00000105840 Itpr1P11881 2749 aa12.26□□□□□ -0.45
Usp48-205ENSMUST00000105840 Rev3lQ61493 3122 aa12.24□□□□□ -0.45
Usp48-205ENSMUST00000105840 Itpr3P70227 2670 aa12.22□□□□□ -0.45
Usp48-205ENSMUST00000105840 Gm9507D3Z5T3 223 aa12.21□□□□□ -0.46
Usp48-205ENSMUST00000105840 Ubr5Q80TP3 2792 aa12.21□□□□□ -0.46
Usp48-205ENSMUST00000105840 Tep1P97499 2629 aa12.21□□□□□ -0.46
Usp48-205ENSMUST00000105840 2310061N02RikQ9D6S9 174 aa12.2□□□□□ -0.46
Usp48-205ENSMUST00000105840 HttP42859 3119 aa12.19□□□□□ -0.46
Usp48-205ENSMUST00000105840 Sec61bQ9CQS8 96 aaKnown RBP12.19□□□□□ -0.46
Usp48-205ENSMUST00000105840 MgaA2AWL7 3003 aaKnown RBP12.19□□□□□ -0.46
Usp48-205ENSMUST00000105840 Frem2Q6NVD0 3160 aa12.17□□□□□ -0.46
Usp48-205ENSMUST00000105840 Mast4Q811L6 2618 aa12.16□□□□□ -0.46
Usp48-205ENSMUST00000105840 Ndufaf8A2AMZ4 74 aa12.15□□□□□ -0.46
Usp48-205ENSMUST00000105840 Myo15bI7HPW8 3033 aa12.13□□□□□ -0.47
Usp48-205ENSMUST00000105840 D6Ertd527eA0A0N4SWI3 464 aa12.13□□□□□ -0.47
Usp48-205ENSMUST00000105840 Cdh23Q99PF4 3354 aa12.1□□□□□ -0.47
Usp48-205ENSMUST00000105840 Stab2Q8R4U0 2559 aa12.08□□□□□ -0.48
Usp48-205ENSMUST00000105840 Vps13aQ5H8C4 3166 aa12.08□□□□□ -0.48
Usp48-205ENSMUST00000105840 Krtap10-4Q08EG8 221 aa12.07□□□□□ -0.48
Usp48-205ENSMUST00000105840 Tnp2P11378 117 aa12.06□□□□□ -0.48
Usp48-205ENSMUST00000105840 Rps29P62274 56 aa12.02□□□□□ -0.48
Usp48-205ENSMUST00000105840 KalrnA2CG49 2964 aa12□□□□□ -0.49
Usp48-205ENSMUST00000105840 Unc80Q8BLN6 3261 aa11.98□□□□□ -0.49
Usp48-205ENSMUST00000105840 9530053A07RikE9PVG8 2581 aa11.95□□□□□ -0.5
Usp48-205ENSMUST00000105840 Nbeal2Q6ZQA0 2742 aa11.95□□□□□ -0.5
Usp48-205ENSMUST00000105840 Celsr1O35161 3034 aa11.93□□□□□ -0.5
Usp48-205ENSMUST00000105840 Igsf10Q3V1M1 2594 aa11.89□□□□□ -0.51
Usp48-205ENSMUST00000105840 Krtap10-10A0A1W2P7T6 217 aa11.88□□□□□ -0.51
Usp48-205ENSMUST00000105840 Celsr3Q91ZI0 3301 aa11.88□□□□□ -0.51
Usp48-205ENSMUST00000105840 BptfA2A654 3036 aaKnown RBP11.85□□□□□ -0.51
Usp48-205ENSMUST00000105840 Pkd1l1Q8R526 2615 aa11.82□□□□□ -0.52
Usp48-205ENSMUST00000105840 AtmQ62388 3066 aa11.82□□□□□ -0.52
Usp48-205ENSMUST00000105840 TgO08710 2766 aa11.81□□□□□ -0.52
Usp48-205ENSMUST00000105840 AspmQ8CJ27 3122 aa11.79□□□□□ -0.52
Usp48-205ENSMUST00000105840 Tex15F8VPN2 2785 aa11.75□□□□□ -0.53
Usp48-205ENSMUST00000105840 Muc2Q80Z19 2680 aa11.75□□□□□ -0.53
Usp48-205ENSMUST00000105840 Gm9112A2AI92 75 aa11.73□□□□□ -0.53
Usp48-205ENSMUST00000105840 Szt2A2A9C3 3431 aa11.71□□□□□ -0.53
Usp48-205ENSMUST00000105840 ApcQ61315 2845 aa11.7□□□□□ -0.54
Usp48-205ENSMUST00000105840 Gm20537G3UYK7 97 aa11.68□□□□□ -0.54
Usp48-205ENSMUST00000105840 Gm21887J3QQ04 176 aa11.67□□□□□ -0.54
Usp48-205ENSMUST00000105840 DspE9Q557 2883 aaKnown RBP11.66□□□□□ -0.54
Usp48-205ENSMUST00000105840 Lrrc37aB1AWG4 3215 aa11.65□□□□□ -0.54
Usp48-205ENSMUST00000105840 Col6a5A6H584 2640 aa11.64□□□□□ -0.55
Usp48-205ENSMUST00000105840 Adgrg4B7ZCC9 3073 aa11.61□□□□□ -0.55
Usp48-205ENSMUST00000105840 Srrm2Q8BTI8 2703 aaKnown RBP11.61□□□□□ -0.55
Usp48-205ENSMUST00000105840 Utp20Q5XG71 2788 aaKnown RBP11.6□□□□□ -0.55
Usp48-205ENSMUST00000105840 Hivep1Q03172 2688 aa11.59□□□□□ -0.55
Usp48-205ENSMUST00000105840 FrylF8VQ05 3007 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms