RNA–Protein interactions for RNA: ENSMUST00000105840.7

Usp48-205, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp48, Length 5,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-205ENSMUST00000105840 Gm9195A0A140LHT4 2805 aa13,06□□□□□ -0,32
Usp48-205ENSMUST00000105840 Prune2Q52KR3 3084 aa13,05□□□□□ -0,32
Usp48-205ENSMUST00000105840 FlnaQ8BTM8 2647 aaKnown RBP13,05□□□□□ -0,32
Usp48-205ENSMUST00000105840 Gm16253D3Z167 63 aa13,04□□□□□ -0,32
Usp48-205ENSMUST00000105840 TrioQ0KL02 3102 aa13,03□□□□□ -0,32
Usp48-205ENSMUST00000105840 OxtP35454 125 aa13□□□□□ -0,33
Usp48-205ENSMUST00000105840 UtrnE9Q6R7 3430 aa12,97□□□□□ -0,33
Usp48-205ENSMUST00000105840 Spink7Q6IE32 76 aa12,96□□□□□ -0,33
Usp48-205ENSMUST00000105840 Fn1P11276 2477 aaKnown RBP12,96□□□□□ -0,34
Usp48-205ENSMUST00000105840 FasnP19096 2504 aaKnown RBP12,93□□□□□ -0,34
Usp48-205ENSMUST00000105840 Notch1Q01705 2531 aa12,89□□□□□ -0,35
Usp48-205ENSMUST00000105840 Bod1lE9Q6J5 3032 aa12,87□□□□□ -0,35
Usp48-205ENSMUST00000105840 AtrQ9JKK8 2635 aa12,87□□□□□ -0,35
Usp48-205ENSMUST00000105840 Romo1P60603 79 aa12,83□□□□□ -0,36
Usp48-205ENSMUST00000105840 Map1aQ9QYR6 2776 aa12,82□□□□□ -0,36
Usp48-205ENSMUST00000105840 Krtap15-1Q9QZU5 150 aa12,8□□□□□ -0,36
Usp48-205ENSMUST00000105840 Rpl37Q9D823 97 aa12,79□□□□□ -0,36
Usp48-205ENSMUST00000105840 Lama3Q61789 3330 aa12,77□□□□□ -0,37
Usp48-205ENSMUST00000105840 Kmt2bO08550 2713 aa12,74□□□□□ -0,37
Usp48-205ENSMUST00000105840 FlnbQ80X90 2602 aaKnown RBP12,71□□□□□ -0,37
Usp48-205ENSMUST00000105840 Gm2310J3QNJ2 377 aa12,68□□□□□ -0,38
Usp48-205ENSMUST00000105840 Lama2Q60675 3118 aaKnown RBP12,67□□□□□ -0,38
Usp48-205ENSMUST00000105840 Krtap29-1A2A5X4 342 aa12,66□□□□□ -0,38
Usp48-205ENSMUST00000105840 Gm10382Q3V0T5 144 aa12,66□□□□□ -0,38
Usp48-205ENSMUST00000105840 NipblQ6KCD5 2798 aaKnown RBP12,64□□□□□ -0,39
Usp48-205ENSMUST00000105840 Camk2n1Q6QWF9 78 aa12,64□□□□□ -0,39
Usp48-205ENSMUST00000105840 Gm17349F7BGH6 99 aa12,64□□□□□ -0,39
Usp48-205ENSMUST00000105840 Gm36176A0A1W2P8D5 158 aa12,63□□□□□ -0,39
Usp48-205ENSMUST00000105840 Mki67E9PVX6 3177 aaKnown RBP12,63□□□□□ -0,39
Usp48-205ENSMUST00000105840 Tnrc18Q80WC3 2878 aa12,59□□□□□ -0,39
Usp48-205ENSMUST00000105840 Ranbp2Q9ERU9 3053 aaKnown RBP12,58□□□□□ -0,4
Usp48-205ENSMUST00000105840 Cfap54Q8C6S9 3106 aa12,57□□□□□ -0,4
Usp48-205ENSMUST00000105840 Stab1Q8R4Y4 2571 aa12,56□□□□□ -0,4
Usp48-205ENSMUST00000105840 2310050C09RikG5E8Z3 280 aa12,56□□□□□ -0,4
Usp48-205ENSMUST00000105840 Chd7A2AJK6 2986 aaKnown RBP12,55□□□□□ -0,4
Usp48-205ENSMUST00000105840 Col12a1Q60847 3120 aa12,54□□□□□ -0,4
Usp48-205ENSMUST00000105840 Ash1lQ99MY8 2958 aa12,53□□□□□ -0,4
Usp48-205ENSMUST00000105840 Dmxl1Q6PNC0 3013 aa12,51□□□□□ -0,41
Usp48-205ENSMUST00000105840 Hectd1Q69ZR2 2618 aaKnown RBP12,51□□□□□ -0,41
Usp48-205ENSMUST00000105840 Krtap13O88375 197 aa12,5□□□□□ -0,41
Usp48-205ENSMUST00000105840 Akap13E9Q394 2776 aa12,48□□□□□ -0,41
Usp48-205ENSMUST00000105840 Gm5767A0A0J9YTU8 78 aa12,45□□□□□ -0,42
Usp48-205ENSMUST00000105840 Fam229aB2KGE5 128 aa12,37□□□□□ -0,43
Usp48-205ENSMUST00000105840 Chd6A3KFM7 2711 aa12,37□□□□□ -0,43
Usp48-205ENSMUST00000105840 BC029722A0A0N4SW31 51 aa12,35□□□□□ -0,43
Usp48-205ENSMUST00000105840 Gm19426M0QWC7 77 aa12,35□□□□□ -0,43
Usp48-205ENSMUST00000105840 Gm7173A0A0G2JEB6 3132 aa12,3□□□□□ -0,44
Usp48-205ENSMUST00000105840 Fbn2Q61555 2907 aa12,29□□□□□ -0,44
Usp48-205ENSMUST00000105840 Krtap14O08640 167 aa12,29□□□□□ -0,44
Usp48-205ENSMUST00000105840 Usp34Q6ZQ93 3582 aa12,29□□□□□ -0,44
Usp48-205ENSMUST00000105840 Cox6b2Q80ZN9 88 aa12,28□□□□□ -0,44
Usp48-205ENSMUST00000105840 Itpr1P11881 2749 aa12,26□□□□□ -0,45
Usp48-205ENSMUST00000105840 Rev3lQ61493 3122 aa12,24□□□□□ -0,45
Usp48-205ENSMUST00000105840 Itpr3P70227 2670 aa12,22□□□□□ -0,45
Usp48-205ENSMUST00000105840 Gm9507D3Z5T3 223 aa12,21□□□□□ -0,46
Usp48-205ENSMUST00000105840 Ubr5Q80TP3 2792 aa12,21□□□□□ -0,46
Usp48-205ENSMUST00000105840 Tep1P97499 2629 aa12,21□□□□□ -0,46
Usp48-205ENSMUST00000105840 2310061N02RikQ9D6S9 174 aa12,2□□□□□ -0,46
Usp48-205ENSMUST00000105840 HttP42859 3119 aa12,19□□□□□ -0,46
Usp48-205ENSMUST00000105840 Sec61bQ9CQS8 96 aaKnown RBP12,19□□□□□ -0,46
Usp48-205ENSMUST00000105840 MgaA2AWL7 3003 aaKnown RBP12,19□□□□□ -0,46
Usp48-205ENSMUST00000105840 Frem2Q6NVD0 3160 aa12,17□□□□□ -0,46
Usp48-205ENSMUST00000105840 Mast4Q811L6 2618 aa12,16□□□□□ -0,46
Usp48-205ENSMUST00000105840 Ndufaf8A2AMZ4 74 aa12,15□□□□□ -0,46
Usp48-205ENSMUST00000105840 Myo15bI7HPW8 3033 aa12,13□□□□□ -0,47
Usp48-205ENSMUST00000105840 D6Ertd527eA0A0N4SWI3 464 aa12,13□□□□□ -0,47
Usp48-205ENSMUST00000105840 Cdh23Q99PF4 3354 aa12,1□□□□□ -0,47
Usp48-205ENSMUST00000105840 Stab2Q8R4U0 2559 aa12,08□□□□□ -0,48
Usp48-205ENSMUST00000105840 Vps13aQ5H8C4 3166 aa12,08□□□□□ -0,48
Usp48-205ENSMUST00000105840 Krtap10-4Q08EG8 221 aa12,07□□□□□ -0,48
Usp48-205ENSMUST00000105840 Tnp2P11378 117 aa12,06□□□□□ -0,48
Usp48-205ENSMUST00000105840 Rps29P62274 56 aa12,02□□□□□ -0,48
Usp48-205ENSMUST00000105840 KalrnA2CG49 2964 aa12□□□□□ -0,49
Usp48-205ENSMUST00000105840 Unc80Q8BLN6 3261 aa11,98□□□□□ -0,49
Usp48-205ENSMUST00000105840 9530053A07RikE9PVG8 2581 aa11,95□□□□□ -0,5
Usp48-205ENSMUST00000105840 Nbeal2Q6ZQA0 2742 aa11,95□□□□□ -0,5
Usp48-205ENSMUST00000105840 Celsr1O35161 3034 aa11,93□□□□□ -0,5
Usp48-205ENSMUST00000105840 Igsf10Q3V1M1 2594 aa11,89□□□□□ -0,51
Usp48-205ENSMUST00000105840 Krtap10-10A0A1W2P7T6 217 aa11,88□□□□□ -0,51
Usp48-205ENSMUST00000105840 Celsr3Q91ZI0 3301 aa11,88□□□□□ -0,51
Usp48-205ENSMUST00000105840 BptfA2A654 3036 aaKnown RBP11,85□□□□□ -0,51
Usp48-205ENSMUST00000105840 Pkd1l1Q8R526 2615 aa11,82□□□□□ -0,52
Usp48-205ENSMUST00000105840 AtmQ62388 3066 aa11,82□□□□□ -0,52
Usp48-205ENSMUST00000105840 TgO08710 2766 aa11,81□□□□□ -0,52
Usp48-205ENSMUST00000105840 AspmQ8CJ27 3122 aa11,79□□□□□ -0,52
Usp48-205ENSMUST00000105840 Tex15F8VPN2 2785 aa11,75□□□□□ -0,53
Usp48-205ENSMUST00000105840 Muc2Q80Z19 2680 aa11,75□□□□□ -0,53
Usp48-205ENSMUST00000105840 Gm9112A2AI92 75 aa11,73□□□□□ -0,53
Usp48-205ENSMUST00000105840 Szt2A2A9C3 3431 aa11,71□□□□□ -0,53
Usp48-205ENSMUST00000105840 ApcQ61315 2845 aa11,7□□□□□ -0,54
Usp48-205ENSMUST00000105840 Gm20537G3UYK7 97 aa11,68□□□□□ -0,54
Usp48-205ENSMUST00000105840 Gm21887J3QQ04 176 aa11,67□□□□□ -0,54
Usp48-205ENSMUST00000105840 DspE9Q557 2883 aaKnown RBP11,66□□□□□ -0,54
Usp48-205ENSMUST00000105840 Lrrc37aB1AWG4 3215 aa11,65□□□□□ -0,54
Usp48-205ENSMUST00000105840 Col6a5A6H584 2640 aa11,64□□□□□ -0,55
Usp48-205ENSMUST00000105840 Adgrg4B7ZCC9 3073 aa11,61□□□□□ -0,55
Usp48-205ENSMUST00000105840 Srrm2Q8BTI8 2703 aaKnown RBP11,61□□□□□ -0,55
Usp48-205ENSMUST00000105840 Utp20Q5XG71 2788 aaKnown RBP11,6□□□□□ -0,55
Usp48-205ENSMUST00000105840 Hivep1Q03172 2688 aa11,59□□□□□ -0,55
Usp48-205ENSMUST00000105840 FrylF8VQ05 3007 aa11,55□□□□□ -0,56
Retrieved 100 of 22,080 RNA–protein pairs in 51,2 ms