RNA–Protein interactions for RNA: ENSMUST00000102632.6

Sort1-201, Transcript of Sortilin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sort1, Length 6,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-201ENSMUST00000102632 Gm10139O88245 57 aa10.65□□□□□ -0.7
Sort1-201ENSMUST00000102632 2310050C09RikG5E8Z3 280 aa10.64□□□□□ -0.71
Sort1-201ENSMUST00000102632 Krtap29-1A2A5X4 342 aa10.61□□□□□ -0.71
Sort1-201ENSMUST00000102632 Gm2696A0A1W2P709 240 aa10.59□□□□□ -0.71
Sort1-201ENSMUST00000102632 Nbeal1E9PYP2 2688 aa10.55□□□□□ -0.72
Sort1-201ENSMUST00000102632 Ankrd11E9Q4F7 2643 aa10.55□□□□□ -0.72
Sort1-201ENSMUST00000102632 Sprr1aQ62266 144 aa10.53□□□□□ -0.72
Sort1-201ENSMUST00000102632 BC029722A0A0N4SW31 51 aa10.52□□□□□ -0.72
Sort1-201ENSMUST00000102632 CenpfE9Q3P4 2997 aaKnown RBP10.5□□□□□ -0.73
Sort1-201ENSMUST00000102632 Gm9195A0A140LHT4 2805 aa10.5□□□□□ -0.73
Sort1-201ENSMUST00000102632 Gm11565A2A4M7 156 aa10.5□□□□□ -0.73
Sort1-201ENSMUST00000102632 Gm10643Q3URG9 111 aa10.49□□□□□ -0.73
Sort1-201ENSMUST00000102632 Gm37013Q8K491 104 aa10.48□□□□□ -0.73
Sort1-201ENSMUST00000102632 Usp34Q6ZQ93 3582 aa10.48□□□□□ -0.73
Sort1-201ENSMUST00000102632 2310057N15RikQ9D6T8 200 aa10.47□□□□□ -0.73
Sort1-201ENSMUST00000102632 FlnbQ80X90 2602 aaKnown RBP10.47□□□□□ -0.73
Sort1-201ENSMUST00000102632 FlnaQ8BTM8 2647 aaKnown RBP10.43□□□□□ -0.74
Sort1-201ENSMUST00000102632 Gm16253D3Z167 63 aa10.4□□□□□ -0.74
Sort1-201ENSMUST00000102632 FasnP19096 2504 aaKnown RBP10.39□□□□□ -0.75
Sort1-201ENSMUST00000102632 Col12a1Q60847 3120 aa10.38□□□□□ -0.75
Sort1-201ENSMUST00000102632 Cep350E9Q309 3095 aa10.36□□□□□ -0.75
Sort1-201ENSMUST00000102632 HrnrQ8VHD8 2496 aa10.35□□□□□ -0.75
Sort1-201ENSMUST00000102632 TrioQ0KL02 3102 aa10.34□□□□□ -0.75
Sort1-201ENSMUST00000102632 Fn1P11276 2477 aaKnown RBP10.33□□□□□ -0.76
Sort1-201ENSMUST00000102632 Akap13E9Q394 2776 aa10.32□□□□□ -0.76
Sort1-201ENSMUST00000102632 Krtap14O08640 167 aa10.29□□□□□ -0.76
Sort1-201ENSMUST00000102632 Rpl37Q9D823 97 aa10.28□□□□□ -0.76
Sort1-201ENSMUST00000102632 Romo1P60603 79 aa10.24□□□□□ -0.77
Sort1-201ENSMUST00000102632 Myo18bE9PV66 2605 aa10.23□□□□□ -0.77
Sort1-201ENSMUST00000102632 Hectd1Q69ZR2 2618 aaKnown RBP10.2□□□□□ -0.78
Sort1-201ENSMUST00000102632 Rev3lQ61493 3122 aa10.2□□□□□ -0.78
Sort1-201ENSMUST00000102632 Zfhx3Q61329 3726 aa10.19□□□□□ -0.78
Sort1-201ENSMUST00000102632 Gm10382Q3V0T5 144 aa10.16□□□□□ -0.78
Sort1-201ENSMUST00000102632 HttP42859 3119 aa10.16□□□□□ -0.78
Sort1-201ENSMUST00000102632 PcntP48725 2898 aa10.15□□□□□ -0.79
Sort1-201ENSMUST00000102632 Gm5965D3Z724 196 aa10.12□□□□□ -0.79
Sort1-201ENSMUST00000102632 Stab1Q8R4Y4 2571 aa10.11□□□□□ -0.79
Sort1-201ENSMUST00000102632 Cdh23Q99PF4 3354 aa10.07□□□□□ -0.8
Sort1-201ENSMUST00000102632 MgaA2AWL7 3003 aaKnown RBP10.05□□□□□ -0.8
Sort1-201ENSMUST00000102632 Igsf10Q3V1M1 2594 aa10.05□□□□□ -0.8
Sort1-201ENSMUST00000102632 2310061N02RikQ9D6S9 174 aa10.05□□□□□ -0.8
Sort1-201ENSMUST00000102632 Ranbp2Q9ERU9 3053 aaKnown RBP10.03□□□□□ -0.8
Sort1-201ENSMUST00000102632 Gm2310J3QNJ2 377 aa10.02□□□□□ -0.81
Sort1-201ENSMUST00000102632 Cystm1Q8K353 104 aa10.02□□□□□ -0.81
Sort1-201ENSMUST00000102632 Gcn1E9PVA8 2671 aaKnown RBP10.01□□□□□ -0.81
Sort1-201ENSMUST00000102632 Ash1lQ99MY8 2958 aa10.01□□□□□ -0.81
Sort1-201ENSMUST00000102632 Notch1Q01705 2531 aa10.01□□□□□ -0.81
Sort1-201ENSMUST00000102632 Gm7173A0A0G2JEB6 3132 aa9.99□□□□□ -0.81
Sort1-201ENSMUST00000102632 Gm21887J3QQ04 176 aa9.99□□□□□ -0.81
Sort1-201ENSMUST00000102632 A730071L15RikQ8C4X0 137 aa9.97□□□□□ -0.81
Sort1-201ENSMUST00000102632 Mki67E9PVX6 3177 aaKnown RBP9.97□□□□□ -0.81
Sort1-201ENSMUST00000102632 Itpr3P70227 2670 aa9.93□□□□□ -0.82
Sort1-201ENSMUST00000102632 BptfA2A654 3036 aaKnown RBP9.91□□□□□ -0.82
Sort1-201ENSMUST00000102632 A930033H14RikG5E8X6 103 aa9.91□□□□□ -0.82
Sort1-201ENSMUST00000102632 NipblQ6KCD5 2798 aaKnown RBP9.91□□□□□ -0.82
Sort1-201ENSMUST00000102632 Lama2Q60675 3118 aaKnown RBP9.88□□□□□ -0.83
Sort1-201ENSMUST00000102632 Gm3646F6S692 53 aa9.85□□□□□ -0.83
Sort1-201ENSMUST00000102632 Mast4Q811L6 2618 aa9.84□□□□□ -0.83
Sort1-201ENSMUST00000102632 Rps29P62274 56 aa9.82□□□□□ -0.84
Sort1-201ENSMUST00000102632 Dmxl1Q6PNC0 3013 aa9.81□□□□□ -0.84
Sort1-201ENSMUST00000102632 Prrc2cQ3TLH4 2846 aaKnown RBP9.81□□□□□ -0.84
Sort1-201ENSMUST00000102632 Celsr3Q91ZI0 3301 aa9.79□□□□□ -0.84
Sort1-201ENSMUST00000102632 Gm9918Q8BUR5 174 aa9.78□□□□□ -0.84
Sort1-201ENSMUST00000102632 D6Ertd527eA0A0N4SWI3 464 aa9.78□□□□□ -0.84
Sort1-201ENSMUST00000102632 Unc80Q8BLN6 3261 aa9.77□□□□□ -0.85
Sort1-201ENSMUST00000102632 Nbeal2Q6ZQA0 2742 aa9.76□□□□□ -0.85
Sort1-201ENSMUST00000102632 9530053A07RikE9PVG8 2581 aa9.74□□□□□ -0.85
Sort1-201ENSMUST00000102632 Szt2A2A9C3 3431 aa9.73□□□□□ -0.85
Sort1-201ENSMUST00000102632 AtmQ62388 3066 aa9.7□□□□□ -0.86
Sort1-201ENSMUST00000102632 Map1aQ9QYR6 2776 aa9.67□□□□□ -0.86
Sort1-201ENSMUST00000102632 Cox6b2Q80ZN9 88 aa9.66□□□□□ -0.86
Sort1-201ENSMUST00000102632 Cfap54Q8C6S9 3106 aa9.66□□□□□ -0.86
Sort1-201ENSMUST00000102632 Tep1P97499 2629 aa9.62□□□□□ -0.87
Sort1-201ENSMUST00000102632 Gm9736A0A1W2P7N1 277 aa9.59□□□□□ -0.87
Sort1-201ENSMUST00000102632 Chd7A2AJK6 2986 aaKnown RBP9.59□□□□□ -0.87
Sort1-201ENSMUST00000102632 Tnp1P10856 55 aa9.59□□□□□ -0.87
Sort1-201ENSMUST00000102632 Ubr5Q80TP3 2792 aa9.57□□□□□ -0.88
Sort1-201ENSMUST00000102632 Celsr1O35161 3034 aa9.57□□□□□ -0.88
Sort1-201ENSMUST00000102632 Kmt2bO08550 2713 aa9.55□□□□□ -0.88
Sort1-201ENSMUST00000102632 Vps13aQ5H8C4 3166 aa9.53□□□□□ -0.88
Sort1-201ENSMUST00000102632 Fbn2Q61555 2907 aa9.53□□□□□ -0.88
Sort1-201ENSMUST00000102632 Gm10318A0A1W2P728 225 aa9.53□□□□□ -0.88
Sort1-201ENSMUST00000102632 Col6a3E9PWQ3 3284 aa9.52□□□□□ -0.89
Sort1-201ENSMUST00000102632 Chd6A3KFM7 2711 aa9.51□□□□□ -0.89
Sort1-201ENSMUST00000102632 4933415A04RikQ9D443 101 aa9.5□□□□□ -0.89
Sort1-201ENSMUST00000102632 KalrnA2CG49 2964 aa9.49□□□□□ -0.89
Sort1-201ENSMUST00000102632 Itpr2Q9Z329 2701 aa9.45□□□□□ -0.9
Sort1-201ENSMUST00000102632 Brca2P97929 3329 aa9.45□□□□□ -0.9
Sort1-201ENSMUST00000102632 Frem2Q6NVD0 3160 aa9.44□□□□□ -0.9
Sort1-201ENSMUST00000102632 Wdfy4E9Q2M9 3149 aa9.44□□□□□ -0.9
Sort1-201ENSMUST00000102632 Myo15bI7HPW8 3033 aa9.43□□□□□ -0.9
Sort1-201ENSMUST00000102632 Igfn1Q3KNY0 2849 aa9.42□□□□□ -0.9
Sort1-201ENSMUST00000102632 Itpr1P11881 2749 aa9.42□□□□□ -0.9
Sort1-201ENSMUST00000102632 FryE9Q8I9 3020 aa9.4□□□□□ -0.91
Sort1-201ENSMUST00000102632 AspmQ8CJ27 3122 aa9.35□□□□□ -0.91
Sort1-201ENSMUST00000102632 Lama1P19137 3084 aa9.32□□□□□ -0.92
Sort1-201ENSMUST00000102632 Prm2P07978 107 aa9.3□□□□□ -0.92
Sort1-201ENSMUST00000102632 Ndufaf8A2AMZ4 74 aa9.28□□□□□ -0.92
Sort1-201ENSMUST00000102632 Myo15aQ9QZZ4 3511 aa9.28□□□□□ -0.92
Sort1-201ENSMUST00000102632 Lrrc37aB1AWG4 3215 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms