RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Gm21798J3QNU5 87 aa10.1□□□□□ -0.79
Col18a1-202ENSMUST00000081654 Chd7A2AJK6 2986 aaKnown RBP10.1□□□□□ -0.79
Col18a1-202ENSMUST00000081654 Map1aQ9QYR6 2776 aa10.09□□□□□ -0.79
Col18a1-202ENSMUST00000081654 Odf3bQ5M8M2 238 aa10.09□□□□□ -0.79
Col18a1-202ENSMUST00000081654 Gm36176A0A1W2P8D5 158 aa10.08□□□□□ -0.8
Col18a1-202ENSMUST00000081654 Akap13E9Q394 2776 aa10.08□□□□□ -0.8
Col18a1-202ENSMUST00000081654 Mast4Q811L6 2618 aa10.08□□□□□ -0.8
Col18a1-202ENSMUST00000081654 6030445D17RikE9Q8F9 148 aa10.06□□□□□ -0.8
Col18a1-202ENSMUST00000081654 Itpr3P70227 2670 aa10.03□□□□□ -0.8
Col18a1-202ENSMUST00000081654 Jbts17Q8CE72 3214 aa10.02□□□□□ -0.81
Col18a1-202ENSMUST00000081654 Igsf10Q3V1M1 2594 aa10□□□□□ -0.81
Col18a1-202ENSMUST00000081654 Col12a1Q60847 3120 aa9.99□□□□□ -0.81
Col18a1-202ENSMUST00000081654 HrnrQ8VHD8 2496 aa9.99□□□□□ -0.81
Col18a1-202ENSMUST00000081654 Kmt2bO08550 2713 aa9.98□□□□□ -0.81
Col18a1-202ENSMUST00000081654 Gm7173A0A0G2JEB6 3132 aa9.98□□□□□ -0.81
Col18a1-202ENSMUST00000081654 MgaA2AWL7 3003 aaKnown RBP9.97□□□□□ -0.81
Col18a1-202ENSMUST00000081654 Lama3Q61789 3330 aa9.97□□□□□ -0.81
Col18a1-202ENSMUST00000081654 Gm4491E0CX42 125 aa9.97□□□□□ -0.81
Col18a1-202ENSMUST00000081654 Fbn2Q61555 2907 aa9.95□□□□□ -0.82
Col18a1-202ENSMUST00000081654 HttP42859 3119 aa9.94□□□□□ -0.82
Col18a1-202ENSMUST00000081654 Dmxl1Q6PNC0 3013 aa9.92□□□□□ -0.82
Col18a1-202ENSMUST00000081654 Gm9508A0A1W2P7W0 230 aa9.92□□□□□ -0.82
Col18a1-202ENSMUST00000081654 Gm16253D3Z167 63 aa9.91□□□□□ -0.82
Col18a1-202ENSMUST00000081654 Gm9955Q8CEJ8 102 aa9.9□□□□□ -0.82
Col18a1-202ENSMUST00000081654 Chd6A3KFM7 2711 aa9.9□□□□□ -0.82
Col18a1-202ENSMUST00000081654 Mki67E9PVX6 3177 aaKnown RBP9.9□□□□□ -0.83
Col18a1-202ENSMUST00000081654 Ubr5Q80TP3 2792 aa9.88□□□□□ -0.83
Col18a1-202ENSMUST00000081654 Rev3lQ61493 3122 aa9.88□□□□□ -0.83
Col18a1-202ENSMUST00000081654 Gm20538F6Z9R1 75 aa9.87□□□□□ -0.83
Col18a1-202ENSMUST00000081654 Krtap29-1A2A5X4 342 aa9.87□□□□□ -0.83
Col18a1-202ENSMUST00000081654 Bod1lE9Q6J5 3032 aa9.86□□□□□ -0.83
Col18a1-202ENSMUST00000081654 KalrnA2CG49 2964 aa9.84□□□□□ -0.83
Col18a1-202ENSMUST00000081654 A730071L15RikQ8C4X0 137 aa9.83□□□□□ -0.84
Col18a1-202ENSMUST00000081654 Ash1lQ99MY8 2958 aa9.82□□□□□ -0.84
Col18a1-202ENSMUST00000081654 Krtap15-1Q9QZU5 150 aa9.82□□□□□ -0.84
Col18a1-202ENSMUST00000081654 Pla2g10Q9QXX3 151 aa9.81□□□□□ -0.84
Col18a1-202ENSMUST00000081654 Tep1P97499 2629 aa9.81□□□□□ -0.84
Col18a1-202ENSMUST00000081654 CriptO70333 101 aa9.81□□□□□ -0.84
Col18a1-202ENSMUST00000081654 Spink7Q6IE32 76 aa9.79□□□□□ -0.84
Col18a1-202ENSMUST00000081654 Cystm1Q8K353 104 aa9.78□□□□□ -0.84
Col18a1-202ENSMUST00000081654 9530053A07RikE9PVG8 2581 aa9.77□□□□□ -0.84
Col18a1-202ENSMUST00000081654 Muc2Q80Z19 2680 aa9.76□□□□□ -0.85
Col18a1-202ENSMUST00000081654 Stab2Q8R4U0 2559 aa9.74□□□□□ -0.85
Col18a1-202ENSMUST00000081654 Gm3880A0A1B0GSB3 72 aa9.73□□□□□ -0.85
Col18a1-202ENSMUST00000081654 Gm37013Q8K491 104 aa9.73□□□□□ -0.85
Col18a1-202ENSMUST00000081654 Fam229aB2KGE5 128 aa9.7□□□□□ -0.86
Col18a1-202ENSMUST00000081654 Nbeal2Q6ZQA0 2742 aa9.7□□□□□ -0.86
Col18a1-202ENSMUST00000081654 Usp34Q6ZQ93 3582 aa9.69□□□□□ -0.86
Col18a1-202ENSMUST00000081654 Sec61bQ9CQS8 96 aaKnown RBP9.68□□□□□ -0.86
Col18a1-202ENSMUST00000081654 Col6a5A6H584 2640 aa9.68□□□□□ -0.86
Col18a1-202ENSMUST00000081654 Pkd1l1Q8R526 2615 aa9.67□□□□□ -0.86
Col18a1-202ENSMUST00000081654 Krtap13O88375 197 aa9.66□□□□□ -0.86
Col18a1-202ENSMUST00000081654 Gm5767A0A0J9YTU8 78 aa9.65□□□□□ -0.87
Col18a1-202ENSMUST00000081654 2310050C09RikG5E8Z3 280 aa9.63□□□□□ -0.87
Col18a1-202ENSMUST00000081654 2310061N02RikQ9D6S9 174 aa9.62□□□□□ -0.87
Col18a1-202ENSMUST00000081654 Gm9507D3Z5T3 223 aa9.61□□□□□ -0.87
Col18a1-202ENSMUST00000081654 Hivep1Q03172 2688 aa9.59□□□□□ -0.87
Col18a1-202ENSMUST00000081654 Krtap14O08640 167 aa9.52□□□□□ -0.89
Col18a1-202ENSMUST00000081654 Itpr2Q9Z329 2701 aa9.5□□□□□ -0.89
Col18a1-202ENSMUST00000081654 Ranbp2Q9ERU9 3053 aaKnown RBP9.49□□□□□ -0.89
Col18a1-202ENSMUST00000081654 Cdh23Q99PF4 3354 aa9.45□□□□□ -0.9
Col18a1-202ENSMUST00000081654 Rps29P62274 56 aa9.45□□□□□ -0.9
Col18a1-202ENSMUST00000081654 Camk2n1Q6QWF9 78 aa9.44□□□□□ -0.9
Col18a1-202ENSMUST00000081654 Cfap54Q8C6S9 3106 aa9.43□□□□□ -0.9
Col18a1-202ENSMUST00000081654 Krtap10-4Q08EG8 221 aa9.42□□□□□ -0.9
Col18a1-202ENSMUST00000081654 Tnp2P11378 117 aa9.41□□□□□ -0.9
Col18a1-202ENSMUST00000081654 Gm2310J3QNJ2 377 aa9.39□□□□□ -0.91
Col18a1-202ENSMUST00000081654 BC029722A0A0N4SW31 51 aa9.39□□□□□ -0.91
Col18a1-202ENSMUST00000081654 AspmQ8CJ27 3122 aa9.38□□□□□ -0.91
Col18a1-202ENSMUST00000081654 Celsr1O35161 3034 aa9.38□□□□□ -0.91
Col18a1-202ENSMUST00000081654 Gm3646F6S692 53 aa9.38□□□□□ -0.91
Col18a1-202ENSMUST00000081654 Rpl37Q9D823 97 aa9.37□□□□□ -0.91
Col18a1-202ENSMUST00000081654 FcgbpE9Q0B5 2583 aa9.36□□□□□ -0.91
Col18a1-202ENSMUST00000081654 Utp20Q5XG71 2788 aaKnown RBP9.35□□□□□ -0.91
Col18a1-202ENSMUST00000081654 Tex15F8VPN2 2785 aa9.35□□□□□ -0.91
Col18a1-202ENSMUST00000081654 AtmQ62388 3066 aa9.35□□□□□ -0.91
Col18a1-202ENSMUST00000081654 Gm19426M0QWC7 77 aa9.34□□□□□ -0.91
Col18a1-202ENSMUST00000081654 Krtap10-10A0A1W2P7T6 217 aa9.29□□□□□ -0.92
Col18a1-202ENSMUST00000081654 Igfn1Q3KNY0 2849 aa9.28□□□□□ -0.92
Col18a1-202ENSMUST00000081654 Vps13aQ5H8C4 3166 aa9.27□□□□□ -0.93
Col18a1-202ENSMUST00000081654 Lrrc37aB1AWG4 3215 aa9.27□□□□□ -0.93
Col18a1-202ENSMUST00000081654 NbeaQ9EPN1 2936 aa9.25□□□□□ -0.93
Col18a1-202ENSMUST00000081654 Szt2A2A9C3 3431 aa9.25□□□□□ -0.93
Col18a1-202ENSMUST00000081654 Romo1P60603 79 aa9.25□□□□□ -0.93
Col18a1-202ENSMUST00000081654 FryE9Q8I9 3020 aa9.23□□□□□ -0.93
Col18a1-202ENSMUST00000081654 Tenm4Q3UHK6 2771 aa9.2□□□□□ -0.94
Col18a1-202ENSMUST00000081654 4933415A04RikQ9D443 101 aa9.16□□□□□ -0.94
Col18a1-202ENSMUST00000081654 Wdfy4E9Q2M9 3149 aa9.16□□□□□ -0.94
Col18a1-202ENSMUST00000081654 Dmxl2Q8BPN8 3032 aa9.16□□□□□ -0.94
Col18a1-202ENSMUST00000081654 TgO08710 2766 aa9.14□□□□□ -0.95
Col18a1-202ENSMUST00000081654 Adgrg4B7ZCC9 3073 aa9.13□□□□□ -0.95
Col18a1-202ENSMUST00000081654 Cox6b2Q80ZN9 88 aa9.13□□□□□ -0.95
Col18a1-202ENSMUST00000081654 FlncQ8VHX6 2726 aaKnown RBP9.13□□□□□ -0.95
Col18a1-202ENSMUST00000081654 BptfA2A654 3036 aaKnown RBP9.13□□□□□ -0.95
Col18a1-202ENSMUST00000081654 Gm10382Q3V0T5 144 aa9.12□□□□□ -0.95
Col18a1-202ENSMUST00000081654 FrylF8VQ05 3007 aa9.11□□□□□ -0.95
Col18a1-202ENSMUST00000081654 Gm2696A0A1W2P709 240 aa9.1□□□□□ -0.95
Col18a1-202ENSMUST00000081654 Srrm2Q8BTI8 2703 aaKnown RBP9.08□□□□□ -0.96
Col18a1-202ENSMUST00000081654 Zzef1Q5SSH7 2924 aa9.06□□□□□ -0.96
Col18a1-202ENSMUST00000081654 DspE9Q557 2883 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 70.2 ms