RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 2310034C09RikQ9D746 214 aa7.5□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Gm12216A0A1W2P827 62 aa7.49□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Gm20661K7N787 53 aa7.49□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Gm16485Q8C4B7 115 aa7.48□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Cdk2ap2Q9CPY4 127 aa7.48□□□□□ -1.21
Ssh1-201ENSMUST00000077689 FlnbQ80X90 2602 aaKnown RBP7.48□□□□□ -1.21
Ssh1-201ENSMUST00000077689 PrcdQ00LT2 53 aa7.48□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Igkv3-4A0A140T8Q4 119 aa7.47□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Vpreb3D3Z6J4 130 aa7.47□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Defb38Q7TNV7 63 aa7.47□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Ndufb1P0DN34 57 aa7.47□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Tenm4Q3UHK6 2771 aa7.46□□□□□ -1.21
Ssh1-201ENSMUST00000077689 Gm10267M0QWD8 85 aa7.45□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Stab1Q8R4Y4 2571 aa7.44□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Itpr2Q9Z329 2701 aa7.44□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Hivep1Q03172 2688 aa7.44□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Reg3aO09037 175 aa7.44□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Fbn1Q61554 2873 aaKnown RBP7.44□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Gm7276Q3TYW4 209 aa7.44□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Tcl1b5P56845 121 aa7.43□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Cmc4Q61908 68 aa7.43□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Gm37013Q8K491 104 aa7.43□□□□□ -1.22
Ssh1-201ENSMUST00000077689 D730001G18RikA0A087WQU7 115 aa7.43□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Gm43218A0A0G2JGT0 114 aa7.42□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Igkv3-9A0A140T8P4 119 aa7.42□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Chchd10Q7TNL9 138 aa7.42□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Notch2O35516 2470 aa7.42□□□□□ -1.22
Ssh1-201ENSMUST00000077689 PolqQ8CGS6 2544 aa7.42□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Tenm1Q9WTS4 2731 aa7.41□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Hspg2Q05793 3707 aaKnown RBP7.41□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Gm21886J3QJU9 214 aa7.4□□□□□ -1.22
Ssh1-201ENSMUST00000077689 Notch1Q01705 2531 aa7.4□□□□□ -1.23
Ssh1-201ENSMUST00000077689 Zcchc13Q9D548 170 aa7.39□□□□□ -1.23
Ssh1-201ENSMUST00000077689 Rpl37aP61514 92 aa7.38□□□□□ -1.23
Ssh1-201ENSMUST00000077689 Phxr5P08399 672 aa7.38□□□□□ -1.23
Ssh1-201ENSMUST00000077689 PscaP57096 123 aa7.38□□□□□ -1.23
Ssh1-201ENSMUST00000077689 1700018G05RikA0A1B0GSI2 66 aa7.36□□□□□ -1.23
Ssh1-201ENSMUST00000077689 Cypt15B1AXS0 87 aa7.34□□□□□ -1.23
Ssh1-201ENSMUST00000077689 Cypt14J3QPF7 87 aa7.34□□□□□ -1.23
Ssh1-201ENSMUST00000077689 Nsd1O88491 2588 aaKnown RBP7.34□□□□□ -1.23
Ssh1-201ENSMUST00000077689 A730009L09RikA0A1B0GS82 72 aa7.34□□□□□ -1.23
Ssh1-201ENSMUST00000077689 PtprqP0C5E4 2300 aa7.33□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Plac8Q9JI48 112 aa7.3□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Srrm2Q8BTI8 2703 aaKnown RBP7.3□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Znf706Q9D115 76 aaKnown RBP7.3□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Col6a5A6H584 2640 aa7.29□□□□□ -1.24
Ssh1-201ENSMUST00000077689 9530053A07RikE9PVG8 2581 aa7.29□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Camk2n2Q78WH7 79 aa7.29□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Psors1c2Q80ZC9 134 aa7.29□□□□□ -1.24
Ssh1-201ENSMUST00000077689 ApcQ61315 2845 aa7.28□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Gm7138L7N2C3 230 aa7.28□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Gm3238W4VSP7 230 aa7.28□□□□□ -1.24
Ssh1-201ENSMUST00000077689 Gm12353A2AGJ4 60 aa7.27□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Q8BGJ3 129 aa7.26□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Ighv8-13A0A075B5Y0 101 aa7.26□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Gm20538F6Z9R1 75 aa7.26□□□□□ -1.25
Ssh1-201ENSMUST00000077689 TgO08710 2766 aa7.26□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Reg3bP35230 175 aa7.24□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Fn1P11276 2477 aaKnown RBP7.24□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Limd2Q8BGB5 128 aa7.24□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Mp68P56379 58 aa7.23□□□□□ -1.25
Ssh1-201ENSMUST00000077689 HrnrQ8VHD8 2496 aa7.23□□□□□ -1.25
Ssh1-201ENSMUST00000077689 1700012A03RikQ9DAF1 130 aa7.22□□□□□ -1.25
Ssh1-201ENSMUST00000077689 Snhg11Q4G0K9 87 aa7.21□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Wfdc6bF6ULY1 148 aa7.2□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Gm28230A0A0A0MQ91 144 aa7.19□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Sslp1Q3UN54 99 aa7.19□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Igkv3-5A0A140T8M6 119 aa7.19□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Gm4707V9GXN5 68 aa7.19□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Gm7137J3QMW1 236 aa7.18□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Uqcr11Q9CPX8 56 aa7.18□□□□□ -1.26
Ssh1-201ENSMUST00000077689 6030445D17RikE9Q8F9 148 aa7.17□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Gm36176A0A1W2P8D5 158 aa7.16□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Prol1E9PYQ4 312 aa7.15□□□□□ -1.26
Ssh1-201ENSMUST00000077689 Fam168bQ80XQ8 194 aa7.15□□□□□ -1.27
Ssh1-201ENSMUST00000077689 Sprr4Q8CGN8 76 aa7.15□□□□□ -1.27
Ssh1-201ENSMUST00000077689 Dmac1Q9CQ00 111 aa7.14□□□□□ -1.27
Ssh1-201ENSMUST00000077689 P84750 121 aa7.14□□□□□ -1.27
Ssh1-201ENSMUST00000077689 VwfQ8CIZ8 2813 aa7.13□□□□□ -1.27
Ssh1-201ENSMUST00000077689 Gm2310J3QNJ2 377 aa7.12□□□□□ -1.27
Ssh1-201ENSMUST00000077689 AplnQ9R0R4 77 aa7.12□□□□□ -1.27
Ssh1-201ENSMUST00000077689 Odf3bQ5M8M2 238 aa7.12□□□□□ -1.27
Ssh1-201ENSMUST00000077689 Wfdc17Q5SSJ1 76 aa7.09□□□□□ -1.27
Ssh1-201ENSMUST00000077689 Gm21798J3QNU5 87 aa7.07□□□□□ -1.28
Ssh1-201ENSMUST00000077689 Prm2P07978 107 aa7.06□□□□□ -1.28
Ssh1-201ENSMUST00000077689 Defb10Q8R2I8 73 aa7.03□□□□□ -1.28
Ssh1-201ENSMUST00000077689 Igsf10Q3V1M1 2594 aa7.03□□□□□ -1.28
Ssh1-201ENSMUST00000077689 Wfdc10Q3V2J9 124 aa7.02□□□□□ -1.29
Ssh1-201ENSMUST00000077689 Defb9Q8R2I6 67 aa7.01□□□□□ -1.29
Ssh1-201ENSMUST00000077689 Romo1P60603 79 aa7□□□□□ -1.29
Ssh1-201ENSMUST00000077689 Csmd3Q80T79 3707 aa6.99□□□□□ -1.29
Ssh1-201ENSMUST00000077689 Pla2g10Q9QXX3 151 aa6.98□□□□□ -1.29
Ssh1-201ENSMUST00000077689 Stab2Q8R4U0 2559 aa6.98□□□□□ -1.29
Ssh1-201ENSMUST00000077689 Pkd1l1Q8R526 2615 aa6.98□□□□□ -1.29
Ssh1-201ENSMUST00000077689 Dnah10D3YYQ8 4591 aa6.94□□□□□ -1.3
Ssh1-201ENSMUST00000077689 Tenm2Q9WTS5 2764 aa6.94□□□□□ -1.3
Ssh1-201ENSMUST00000077689 Gm11627A6PWP4 55 aa6.94□□□□□ -1.3
Ssh1-201ENSMUST00000077689 Kmt2aP55200 3966 aa6.92□□□□□ -1.3
Ssh1-201ENSMUST00000077689 Gm9508A0A1W2P7W0 230 aa6.91□□□□□ -1.3
Ssh1-201ENSMUST00000077689 Defb1P56386 69 aa6.9□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 93.6 ms