RNA–Protein interactions for RNA: ENSMUST00000062292.4

Foxc1-201, Transcript of Forkhead box protein C1, mousemouse

APPRIS P1 BASIC

Gene Foxc1, Length 5,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1-201ENSMUST00000062292 Gm36176A0A1W2P8D5 158 aa13.85□□□□□ -0.19
Foxc1-201ENSMUST00000062292 A730071L15RikQ8C4X0 137 aa13.84□□□□□ -0.19
Foxc1-201ENSMUST00000062292 FlnaQ8BTM8 2647 aaKnown RBP13.84□□□□□ -0.19
Foxc1-201ENSMUST00000062292 Romo1P60603 79 aa13.81□□□□□ -0.2
Foxc1-201ENSMUST00000062292 CenpfE9Q3P4 2997 aaKnown RBP13.81□□□□□ -0.2
Foxc1-201ENSMUST00000062292 Gm5767A0A0J9YTU8 78 aa13.79□□□□□ -0.2
Foxc1-201ENSMUST00000062292 Gcn1E9PVA8 2671 aaKnown RBP13.77□□□□□ -0.21
Foxc1-201ENSMUST00000062292 Krtap29-1A2A5X4 342 aa13.75□□□□□ -0.21
Foxc1-201ENSMUST00000062292 Ep400Q8CHI8 3072 aaKnown RBP13.75□□□□□ -0.21
Foxc1-201ENSMUST00000062292 Gm19426M0QWC7 77 aa13.73□□□□□ -0.21
Foxc1-201ENSMUST00000062292 Dnah12Q3V0Q1 3086 aa13.72□□□□□ -0.21
Foxc1-201ENSMUST00000062292 BC029722A0A0N4SW31 51 aa13.71□□□□□ -0.21
Foxc1-201ENSMUST00000062292 Gm9195A0A140LHT4 2805 aa13.67□□□□□ -0.22
Foxc1-201ENSMUST00000062292 Gm42715A0A087WP63 3095 aaKnown RBP13.63□□□□□ -0.23
Foxc1-201ENSMUST00000062292 Gm10382Q3V0T5 144 aa13.63□□□□□ -0.23
Foxc1-201ENSMUST00000062292 Notch1Q01705 2531 aa13.61□□□□□ -0.23
Foxc1-201ENSMUST00000062292 2310050C09RikG5E8Z3 280 aa13.57□□□□□ -0.24
Foxc1-201ENSMUST00000062292 Krtap13O88375 197 aa13.55□□□□□ -0.24
Foxc1-201ENSMUST00000062292 Cep350E9Q309 3095 aa13.55□□□□□ -0.24
Foxc1-201ENSMUST00000062292 UtrnE9Q6R7 3430 aa13.55□□□□□ -0.24
Foxc1-201ENSMUST00000062292 PcntP48725 2898 aa13.51□□□□□ -0.25
Foxc1-201ENSMUST00000062292 Stab1Q8R4Y4 2571 aa13.45□□□□□ -0.26
Foxc1-201ENSMUST00000062292 Hectd1Q69ZR2 2618 aaKnown RBP13.41□□□□□ -0.26
Foxc1-201ENSMUST00000062292 4933415A04RikQ9D443 101 aa13.41□□□□□ -0.26
Foxc1-201ENSMUST00000062292 Gm9507D3Z5T3 223 aa13.4□□□□□ -0.26
Foxc1-201ENSMUST00000062292 Kmt2bO08550 2713 aa13.39□□□□□ -0.27
Foxc1-201ENSMUST00000062292 Akap13E9Q394 2776 aa13.38□□□□□ -0.27
Foxc1-201ENSMUST00000062292 1700042G07RikB1AUF7 90 aa13.37□□□□□ -0.27
Foxc1-201ENSMUST00000062292 Krtap14O08640 167 aa13.28□□□□□ -0.28
Foxc1-201ENSMUST00000062292 Gm2310J3QNJ2 377 aa13.24□□□□□ -0.29
Foxc1-201ENSMUST00000062292 Krtap10-4Q08EG8 221 aa13.23□□□□□ -0.29
Foxc1-201ENSMUST00000062292 Cox6b2Q80ZN9 88 aa13.21□□□□□ -0.3
Foxc1-201ENSMUST00000062292 TrioQ0KL02 3102 aa13.2□□□□□ -0.3
Foxc1-201ENSMUST00000062292 Prrc2cQ3TLH4 2846 aaKnown RBP13.2□□□□□ -0.3
Foxc1-201ENSMUST00000062292 Mast4Q811L6 2618 aa13.19□□□□□ -0.3
Foxc1-201ENSMUST00000062292 Lama3Q61789 3330 aa13.18□□□□□ -0.3
Foxc1-201ENSMUST00000062292 Rps29P62274 56 aa13.17□□□□□ -0.3
Foxc1-201ENSMUST00000062292 Prune2Q52KR3 3084 aa13.14□□□□□ -0.31
Foxc1-201ENSMUST00000062292 Jbts17Q8CE72 3214 aa13.14□□□□□ -0.31
Foxc1-201ENSMUST00000062292 NipblQ6KCD5 2798 aaKnown RBP13.13□□□□□ -0.31
Foxc1-201ENSMUST00000062292 2310061N02RikQ9D6S9 174 aa13.09□□□□□ -0.31
Foxc1-201ENSMUST00000062292 Krtap10-10A0A1W2P7T6 217 aa13.08□□□□□ -0.32
Foxc1-201ENSMUST00000062292 Igsf10Q3V1M1 2594 aa13.04□□□□□ -0.32
Foxc1-201ENSMUST00000062292 9530053A07RikE9PVG8 2581 aa13.02□□□□□ -0.32
Foxc1-201ENSMUST00000062292 Itpr3P70227 2670 aa13□□□□□ -0.33
Foxc1-201ENSMUST00000062292 Tep1P97499 2629 aa12.99□□□□□ -0.33
Foxc1-201ENSMUST00000062292 Tnp2P11378 117 aa12.98□□□□□ -0.33
Foxc1-201ENSMUST00000062292 Map1aQ9QYR6 2776 aa12.95□□□□□ -0.34
Foxc1-201ENSMUST00000062292 Bod1lE9Q6J5 3032 aa12.93□□□□□ -0.34
Foxc1-201ENSMUST00000062292 Gm21887J3QQ04 176 aa12.89□□□□□ -0.35
Foxc1-201ENSMUST00000062292 Usp34Q6ZQ93 3582 aa12.89□□□□□ -0.35
Foxc1-201ENSMUST00000062292 Ubr5Q80TP3 2792 aa12.88□□□□□ -0.35
Foxc1-201ENSMUST00000062292 D6Ertd527eA0A0N4SWI3 464 aa12.87□□□□□ -0.35
Foxc1-201ENSMUST00000062292 Mki67E9PVX6 3177 aaKnown RBP12.87□□□□□ -0.35
Foxc1-201ENSMUST00000062292 SmcpP15265 143 aa12.87□□□□□ -0.35
Foxc1-201ENSMUST00000062292 Chd6A3KFM7 2711 aa12.86□□□□□ -0.35
Foxc1-201ENSMUST00000062292 Stab2Q8R4U0 2559 aa12.83□□□□□ -0.36
Foxc1-201ENSMUST00000062292 Ndufaf8A2AMZ4 74 aa12.79□□□□□ -0.36
Foxc1-201ENSMUST00000062292 Cfap54Q8C6S9 3106 aa12.79□□□□□ -0.36
Foxc1-201ENSMUST00000062292 Lama2Q60675 3118 aaKnown RBP12.79□□□□□ -0.36
Foxc1-201ENSMUST00000062292 Col12a1Q60847 3120 aa12.77□□□□□ -0.36
Foxc1-201ENSMUST00000062292 Itpr1P11881 2749 aa12.77□□□□□ -0.36
Foxc1-201ENSMUST00000062292 Nbeal2Q6ZQA0 2742 aa12.73□□□□□ -0.37
Foxc1-201ENSMUST00000062292 Chd7A2AJK6 2986 aaKnown RBP12.72□□□□□ -0.37
Foxc1-201ENSMUST00000062292 Tnrc18Q80WC3 2878 aa12.7□□□□□ -0.38
Foxc1-201ENSMUST00000062292 Ranbp2Q9ERU9 3053 aaKnown RBP12.7□□□□□ -0.38
Foxc1-201ENSMUST00000062292 Gm2696A0A1W2P709 240 aa12.7□□□□□ -0.38
Foxc1-201ENSMUST00000062292 Pkd1l1Q8R526 2615 aa12.64□□□□□ -0.39
Foxc1-201ENSMUST00000062292 HttP42859 3119 aa12.61□□□□□ -0.39
Foxc1-201ENSMUST00000062292 Tnp1P10856 55 aa12.6□□□□□ -0.39
Foxc1-201ENSMUST00000062292 Cdh23Q99PF4 3354 aa12.57□□□□□ -0.4
Foxc1-201ENSMUST00000062292 MgaA2AWL7 3003 aaKnown RBP12.57□□□□□ -0.4
Foxc1-201ENSMUST00000062292 Ash1lQ99MY8 2958 aa12.56□□□□□ -0.4
Foxc1-201ENSMUST00000062292 Gm5965D3Z724 196 aa12.56□□□□□ -0.4
Foxc1-201ENSMUST00000062292 2310057N15RikQ9D6T8 200 aa12.53□□□□□ -0.4
Foxc1-201ENSMUST00000062292 Dmxl1Q6PNC0 3013 aa12.48□□□□□ -0.41
Foxc1-201ENSMUST00000062292 Rev3lQ61493 3122 aa12.48□□□□□ -0.41
Foxc1-201ENSMUST00000062292 Gm40193A0A1B0GT39 78 aa12.42□□□□□ -0.42
Foxc1-201ENSMUST00000062292 FcgbpE9Q0B5 2583 aa12.41□□□□□ -0.42
Foxc1-201ENSMUST00000062292 Gm7173A0A0G2JEB6 3132 aa12.4□□□□□ -0.42
Foxc1-201ENSMUST00000062292 Gm9112A2AI92 75 aa12.4□□□□□ -0.42
Foxc1-201ENSMUST00000062292 Fbn2Q61555 2907 aa12.39□□□□□ -0.43
Foxc1-201ENSMUST00000062292 Myo15bI7HPW8 3033 aa12.37□□□□□ -0.43
Foxc1-201ENSMUST00000062292 Col6a5A6H584 2640 aa12.36□□□□□ -0.43
Foxc1-201ENSMUST00000062292 Vps13aQ5H8C4 3166 aa12.24□□□□□ -0.45
Foxc1-201ENSMUST00000062292 Unc80Q8BLN6 3261 aa12.23□□□□□ -0.45
Foxc1-201ENSMUST00000062292 Szt2A2A9C3 3431 aa12.23□□□□□ -0.45
Foxc1-201ENSMUST00000062292 Hivep1Q03172 2688 aa12.23□□□□□ -0.45
Foxc1-201ENSMUST00000062292 Muc2Q80Z19 2680 aa12.19□□□□□ -0.46
Foxc1-201ENSMUST00000062292 Itpr2Q9Z329 2701 aa12.18□□□□□ -0.46
Foxc1-201ENSMUST00000062292 Gm20537G3UYK7 97 aa12.17□□□□□ -0.46
Foxc1-201ENSMUST00000062292 TgO08710 2766 aa12.17□□□□□ -0.46
Foxc1-201ENSMUST00000062292 Celsr3Q91ZI0 3301 aa12.17□□□□□ -0.46
Foxc1-201ENSMUST00000062292 KalrnA2CG49 2964 aa12.12□□□□□ -0.47
Foxc1-201ENSMUST00000062292 Tex15F8VPN2 2785 aa12.12□□□□□ -0.47
Foxc1-201ENSMUST00000062292 Srrm2Q8BTI8 2703 aaKnown RBP12.09□□□□□ -0.47
Foxc1-201ENSMUST00000062292 B930094E09RikQ8C4T2 136 aa12.07□□□□□ -0.48
Foxc1-201ENSMUST00000062292 Frem2Q6NVD0 3160 aa12.07□□□□□ -0.48
Foxc1-201ENSMUST00000062292 A930033H14RikG5E8X6 103 aa12.04□□□□□ -0.48
Foxc1-201ENSMUST00000062292 AtmQ62388 3066 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms