RNA–Protein interactions for RNA: ENSMUST00000054588.14

Col9a1-201, Transcript of Collagen alpha-1(IX) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col9a1, Length 3,834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-201ENSMUST00000054588 Phxr5P08399 672 aa7.05□□□□□ -1.28
Col9a1-201ENSMUST00000054588 Fam229bQ8CF36 80 aa7.05□□□□□ -1.28
Col9a1-201ENSMUST00000054588 Gm10837Q3UTT8 145 aa7.05□□□□□ -1.28
Col9a1-201ENSMUST00000054588 Wfdc3Q14AE4 130 aa7.04□□□□□ -1.28
Col9a1-201ENSMUST00000054588 Wfdc10Q3V2J9 124 aa7.04□□□□□ -1.28
Col9a1-201ENSMUST00000054588 Phf5aP83870 110 aaKnown RBP7.04□□□□□ -1.28
Col9a1-201ENSMUST00000054588 Adm2Q7TNK8 150 aa7.04□□□□□ -1.28
Col9a1-201ENSMUST00000054588 1700018G05RikA0A1B0GSI2 66 aa7.03□□□□□ -1.28
Col9a1-201ENSMUST00000054588 6430550D23RikE9Q1X6 194 aa7.03□□□□□ -1.28
Col9a1-201ENSMUST00000054588 Gm5617Q91VN2 117 aa7.03□□□□□ -1.28
Col9a1-201ENSMUST00000054588 BsnO88737 3942 aa7.02□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Vpreb2P13373 142 aa7.02□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Xirp2Q4U4S6 3784 aa7.02□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Serp1Q9Z1W5 66 aa7.01□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Gm10642Q3TWM1 71 aa7□□□□□ -1.29
Col9a1-201ENSMUST00000054588 H2al1aQ5M8Q2 105 aa7□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Gm12353A2AGJ4 60 aa7□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Igkv3-7A0A0G2JE31 119 aa7□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Cox6a2P43023 97 aa7□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Dmac1Q9CQ00 111 aa7□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Spata3Q9D9T6 193 aa7□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Gm11627A6PWP4 55 aa6.99□□□□□ -1.29
Col9a1-201ENSMUST00000054588 UqcrqQ9CQ69 82 aa6.99□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Vpreb3D3Z6J4 130 aa6.98□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Reg3aO09037 175 aa6.98□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Gm44790A0A0N4SV91 103 aa6.98□□□□□ -1.29
Col9a1-201ENSMUST00000054588 SnurfQ9WU12 71 aa6.98□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Gm9507D3Z5T3 223 aa6.97□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Gm10267M0QWD8 85 aa6.97□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Igkv3-4A0A140T8Q4 119 aa6.97□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Vpreb1P13372 142 aa6.97□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Defb39Q70KL3 74 aa6.96□□□□□ -1.29
Col9a1-201ENSMUST00000054588 A330070K13RikQ8CA53 115 aa6.96□□□□□ -1.29
Col9a1-201ENSMUST00000054588 Wfdc6bF6ULY1 148 aa6.96□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Gm17349F7BGH6 99 aa6.95□□□□□ -1.3
Col9a1-201ENSMUST00000054588 A930002H24RikQ8C8Y3 163 aa6.95□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Prol1E9PYQ4 312 aa6.94□□□□□ -1.3
Col9a1-201ENSMUST00000054588 P84750 121 aa6.93□□□□□ -1.3
Col9a1-201ENSMUST00000054588 C130032M10RikQ8C888 123 aa6.93□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Anapc11Q9CPX9 84 aa6.93□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Gm28230A0A0A0MQ91 144 aa6.93□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Mrpl34Q99N91 92 aa6.93□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Rpl37aP61514 92 aa6.92□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Mrpl55Q9CZ83 127 aa6.92□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Muc6Q80T03 2850 aa6.91□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Gm10570F6VB42 170 aa6.91□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Gm21886J3QJU9 214 aa6.91□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Sprr1aQ62266 144 aa6.9□□□□□ -1.3
Col9a1-201ENSMUST00000054588 Igkv3-3A0A140T8Q0 119 aa6.9□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Krtap10-4Q08EG8 221 aa6.9□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Tenm2Q9WTS5 2764 aa6.89□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Defb13Q8R2I4 64 aa6.89□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Gm10337F7DEP7 55 aa6.89□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Q8BT88 171 aa6.88□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Defb11Q8R2I7 77 aa6.88□□□□□ -1.31
Col9a1-201ENSMUST00000054588 1700074P13RikQ9D9G7 251 aa6.88□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Igkv8-19A0A0G2JFN8 121 aa6.87□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Coa6Q8BGD8 79 aa6.87□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Defb9Q8R2I6 67 aa6.85□□□□□ -1.31
Col9a1-201ENSMUST00000054588 A530084C06RikQ3UTW2 186 aa6.84□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Hspg2Q05793 3707 aaKnown RBP6.84□□□□□ -1.31
Col9a1-201ENSMUST00000054588 Gm37013Q8K491 104 aa6.84□□□□□ -1.31
Col9a1-201ENSMUST00000054588 A0A286YE49 62 aa6.83□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Fam104aA2A6P4 185 aa6.83□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Atox1O08997 68 aaKnown RBP6.82□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Chchd10Q7TNL9 138 aa6.81□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Gm20604F8WIA3 75 aa6.8□□□□□ -1.32
Col9a1-201ENSMUST00000054588 RetnlbQ99P86 105 aa6.8□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Spaca4Q80ZQ0 127 aa6.8□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Gm28374F6SG70 93 aa6.79□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Spint4Q9D263 159 aa6.79□□□□□ -1.32
Col9a1-201ENSMUST00000054588 H2al1bA0A087WP11 105 aa6.78□□□□□ -1.32
Col9a1-201ENSMUST00000054588 AW011738F6S7Q2 159 aa6.78□□□□□ -1.32
Col9a1-201ENSMUST00000054588 H2al1kJ3QP08 105 aa6.78□□□□□ -1.32
Col9a1-201ENSMUST00000054588 H2al1eQ810S6 105 aa6.78□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Cdc42se1Q8BHL7 80 aa6.78□□□□□ -1.32
Col9a1-201ENSMUST00000054588 H2al1mQ9DAD9 105 aa6.78□□□□□ -1.32
Col9a1-201ENSMUST00000054588 AI606181Q8C7B9 129 aa6.78□□□□□ -1.32
Col9a1-201ENSMUST00000054588 Zcchc13Q9D548 170 aa6.75□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Krtap10-10A0A1W2P7T6 217 aa6.74□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Q8K1L6 76 aa6.73□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Gm10197F6QEY5 67 aa6.72□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Gm10139O88245 57 aa6.72□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Ccdc179J3QM76 67 aa6.72□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Coa5Q99M07 74 aa6.72□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Gpr15lA0A0B4J1N3 78 aa6.71□□□□□ -1.33
Col9a1-201ENSMUST00000054588 Odf3bQ5M8M2 238 aa6.68□□□□□ -1.34
Col9a1-201ENSMUST00000054588 Megf8P60882 2789 aa6.68□□□□□ -1.34
Col9a1-201ENSMUST00000054588 Gm27235Q3UW50 83 aa6.68□□□□□ -1.34
Col9a1-201ENSMUST00000054588 Sox16Q62247 57 aa6.67□□□□□ -1.34
Col9a1-201ENSMUST00000054588 Znf706Q9D115 76 aaKnown RBP6.67□□□□□ -1.34
Col9a1-201ENSMUST00000054588 2310061N02RikQ9D6S9 174 aa6.65□□□□□ -1.34
Col9a1-201ENSMUST00000054588 Krtap13O88375 197 aa6.63□□□□□ -1.35
Col9a1-201ENSMUST00000054588 SptssbQ925E8 76 aa6.62□□□□□ -1.35
Col9a1-201ENSMUST00000054588 6030445D17RikE9Q8F9 148 aa6.61□□□□□ -1.35
Col9a1-201ENSMUST00000054588 2310050C09RikG5E8Z3 280 aa6.61□□□□□ -1.35
Col9a1-201ENSMUST00000054588 Bean1Q9EQG5 255 aa6.61□□□□□ -1.35
Col9a1-201ENSMUST00000054588 Csmd3Q80T79 3707 aa6.6□□□□□ -1.35
Col9a1-201ENSMUST00000054588 Gm2696A0A1W2P709 240 aa6.59□□□□□ -1.35
Col9a1-201ENSMUST00000054588 Phxr4P15974 95 aa6.59□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms