RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Gm21798J3QNU5 87 aa6.25□□□□□ -1.41
Syne1-201ENSMUST00000041639 Gm26620Q9CY65 116 aa6.25□□□□□ -1.41
Syne1-201ENSMUST00000041639 Chd6A3KFM7 2711 aa6.25□□□□□ -1.41
Syne1-201ENSMUST00000041639 HttP42859 3119 aa6.25□□□□□ -1.41
Syne1-201ENSMUST00000041639 Dmxl1Q6PNC0 3013 aa6.25□□□□□ -1.41
Syne1-201ENSMUST00000041639 Itpr1P11881 2749 aa6.23□□□□□ -1.41
Syne1-201ENSMUST00000041639 Tnrc18Q80WC3 2878 aa6.23□□□□□ -1.41
Syne1-201ENSMUST00000041639 Gm10320E9PW43 113 aa6.23□□□□□ -1.41
Syne1-201ENSMUST00000041639 Gm7137J3QMW1 236 aa6.23□□□□□ -1.41
Syne1-201ENSMUST00000041639 Chd7A2AJK6 2986 aaKnown RBP6.21□□□□□ -1.42
Syne1-201ENSMUST00000041639 Ubr5Q80TP3 2792 aa6.2□□□□□ -1.42
Syne1-201ENSMUST00000041639 Fbn2Q61555 2907 aa6.19□□□□□ -1.42
Syne1-201ENSMUST00000041639 6030445D17RikE9Q8F9 148 aa6.18□□□□□ -1.42
Syne1-201ENSMUST00000041639 Cypt14J3QPF7 87 aa6.18□□□□□ -1.42
Syne1-201ENSMUST00000041639 Frem2Q6NVD0 3160 aa6.18□□□□□ -1.42
Syne1-201ENSMUST00000041639 MgaA2AWL7 3003 aaKnown RBP6.17□□□□□ -1.42
Syne1-201ENSMUST00000041639 Gm3880A0A1B0GSB3 72 aa6.17□□□□□ -1.42
Syne1-201ENSMUST00000041639 OxtP35454 125 aa6.16□□□□□ -1.42
Syne1-201ENSMUST00000041639 Cystm1Q8K353 104 aa6.16□□□□□ -1.42
Syne1-201ENSMUST00000041639 CriptO70333 101 aa6.16□□□□□ -1.42
Syne1-201ENSMUST00000041639 Rev3lQ61493 3122 aa6.16□□□□□ -1.42
Syne1-201ENSMUST00000041639 Tep1P97499 2629 aa6.15□□□□□ -1.43
Syne1-201ENSMUST00000041639 AtmQ62388 3066 aa6.15□□□□□ -1.43
Syne1-201ENSMUST00000041639 Itpr3P70227 2670 aa6.14□□□□□ -1.43
Syne1-201ENSMUST00000041639 NbdyA0A0N4SUI7 68 aa6.14□□□□□ -1.43
Syne1-201ENSMUST00000041639 Unc80Q8BLN6 3261 aa6.12□□□□□ -1.43
Syne1-201ENSMUST00000041639 Vps13aQ5H8C4 3166 aa6.12□□□□□ -1.43
Syne1-201ENSMUST00000041639 Gm20538F6Z9R1 75 aa6.12□□□□□ -1.43
Syne1-201ENSMUST00000041639 Pla2g10Q9QXX3 151 aa6.12□□□□□ -1.43
Syne1-201ENSMUST00000041639 Gm10065F6TJM2 114 aa6.11□□□□□ -1.43
Syne1-201ENSMUST00000041639 Igsf10Q3V1M1 2594 aa6.11□□□□□ -1.43
Syne1-201ENSMUST00000041639 Gm9508A0A1W2P7W0 230 aa6.1□□□□□ -1.43
Syne1-201ENSMUST00000041639 Gm4491E0CX42 125 aa6.08□□□□□ -1.44
Syne1-201ENSMUST00000041639 9530053A07RikE9PVG8 2581 aa6.08□□□□□ -1.44
Syne1-201ENSMUST00000041639 Gm9821Q8K076 103 aa6.07□□□□□ -1.44
Syne1-201ENSMUST00000041639 KalrnA2CG49 2964 aa6.07□□□□□ -1.44
Syne1-201ENSMUST00000041639 Gm9955Q8CEJ8 102 aa6.07□□□□□ -1.44
Syne1-201ENSMUST00000041639 AspmQ8CJ27 3122 aa6.07□□□□□ -1.44
Syne1-201ENSMUST00000041639 Cdh23Q99PF4 3354 aa6.07□□□□□ -1.44
Syne1-201ENSMUST00000041639 Nbeal2Q6ZQA0 2742 aa6.06□□□□□ -1.44
Syne1-201ENSMUST00000041639 Spink7Q6IE32 76 aa6.05□□□□□ -1.44
Syne1-201ENSMUST00000041639 BptfA2A654 3036 aaKnown RBP6.04□□□□□ -1.44
Syne1-201ENSMUST00000041639 Gm10139O88245 57 aa6.04□□□□□ -1.44
Syne1-201ENSMUST00000041639 A730071L15RikQ8C4X0 137 aa6.04□□□□□ -1.44
Syne1-201ENSMUST00000041639 Gm11565A2A4M7 156 aa6.03□□□□□ -1.44
Syne1-201ENSMUST00000041639 Odf3bQ5M8M2 238 aa6.03□□□□□ -1.44
Syne1-201ENSMUST00000041639 Myo15bI7HPW8 3033 aa6.03□□□□□ -1.44
Syne1-201ENSMUST00000041639 Stab2Q8R4U0 2559 aa6.02□□□□□ -1.45
Syne1-201ENSMUST00000041639 Pkd1l1Q8R526 2615 aa6.02□□□□□ -1.45
Syne1-201ENSMUST00000041639 Celsr1O35161 3034 aa6.01□□□□□ -1.45
Syne1-201ENSMUST00000041639 Celsr3Q91ZI0 3301 aa6.01□□□□□ -1.45
Syne1-201ENSMUST00000041639 Col6a5A6H584 2640 aa6.01□□□□□ -1.45
Syne1-201ENSMUST00000041639 Sprr1aQ62266 144 aa6□□□□□ -1.45
Syne1-201ENSMUST00000041639 Gm37013Q8K491 104 aa5.99□□□□□ -1.45
Syne1-201ENSMUST00000041639 Gm36176A0A1W2P8D5 158 aa5.97□□□□□ -1.45
Syne1-201ENSMUST00000041639 Krtap15-1Q9QZU5 150 aa5.97□□□□□ -1.45
Syne1-201ENSMUST00000041639 Gm17349F7BGH6 99 aa5.95□□□□□ -1.46
Syne1-201ENSMUST00000041639 Gm3646F6S692 53 aa5.95□□□□□ -1.46
Syne1-201ENSMUST00000041639 Muc2Q80Z19 2680 aa5.93□□□□□ -1.46
Syne1-201ENSMUST00000041639 Gm16253D3Z167 63 aa5.93□□□□□ -1.46
Syne1-201ENSMUST00000041639 FrylF8VQ05 3007 aa5.92□□□□□ -1.46
Syne1-201ENSMUST00000041639 Tex15F8VPN2 2785 aa5.91□□□□□ -1.46
Syne1-201ENSMUST00000041639 FryE9Q8I9 3020 aa5.9□□□□□ -1.47
Syne1-201ENSMUST00000041639 Lama1P19137 3084 aa5.89□□□□□ -1.47
Syne1-201ENSMUST00000041639 DspE9Q557 2883 aaKnown RBP5.88□□□□□ -1.47
Syne1-201ENSMUST00000041639 Lrrc37aB1AWG4 3215 aa5.88□□□□□ -1.47
Syne1-201ENSMUST00000041639 Szt2A2A9C3 3431 aa5.84□□□□□ -1.47
Syne1-201ENSMUST00000041639 Adgrg4B7ZCC9 3073 aa5.82□□□□□ -1.48
Syne1-201ENSMUST00000041639 Camk2n1Q6QWF9 78 aa5.82□□□□□ -1.48
Syne1-201ENSMUST00000041639 Hivep1Q03172 2688 aa5.82□□□□□ -1.48
Syne1-201ENSMUST00000041639 Krtap13O88375 197 aa5.81□□□□□ -1.48
Syne1-201ENSMUST00000041639 Krtap29-1A2A5X4 342 aa5.81□□□□□ -1.48
Syne1-201ENSMUST00000041639 Rpl37Q9D823 97 aa5.8□□□□□ -1.48
Syne1-201ENSMUST00000041639 Utp20Q5XG71 2788 aaKnown RBP5.8□□□□□ -1.48
Syne1-201ENSMUST00000041639 Wdfy4E9Q2M9 3149 aa5.79□□□□□ -1.48
Syne1-201ENSMUST00000041639 ApcQ61315 2845 aa5.79□□□□□ -1.48
Syne1-201ENSMUST00000041639 Itpr2Q9Z329 2701 aa5.79□□□□□ -1.48
Syne1-201ENSMUST00000041639 Fam229aB2KGE5 128 aa5.79□□□□□ -1.48
Syne1-201ENSMUST00000041639 Brca2P97929 3329 aa5.78□□□□□ -1.48
Syne1-201ENSMUST00000041639 4933415A04RikQ9D443 101 aa5.78□□□□□ -1.48
Syne1-201ENSMUST00000041639 Romo1P60603 79 aa5.77□□□□□ -1.49
Syne1-201ENSMUST00000041639 2310050C09RikG5E8Z3 280 aa5.77□□□□□ -1.49
Syne1-201ENSMUST00000041639 1700042G07RikB1AUF7 90 aa5.76□□□□□ -1.49
Syne1-201ENSMUST00000041639 Gm9507D3Z5T3 223 aa5.75□□□□□ -1.49
Syne1-201ENSMUST00000041639 Gm5767A0A0J9YTU8 78 aa5.75□□□□□ -1.49
Syne1-201ENSMUST00000041639 Igfn1Q3KNY0 2849 aa5.74□□□□□ -1.49
Syne1-201ENSMUST00000041639 Col6a3E9PWQ3 3284 aa5.74□□□□□ -1.49
Syne1-201ENSMUST00000041639 Zzef1Q5SSH7 2924 aa5.73□□□□□ -1.49
Syne1-201ENSMUST00000041639 Gm10382Q3V0T5 144 aa5.73□□□□□ -1.49
Syne1-201ENSMUST00000041639 NbeaQ9EPN1 2936 aa5.72□□□□□ -1.49
Syne1-201ENSMUST00000041639 SmcpP15265 143 aa5.72□□□□□ -1.49
Syne1-201ENSMUST00000041639 Dmxl2Q8BPN8 3032 aa5.72□□□□□ -1.49
Syne1-201ENSMUST00000041639 Srrm2Q8BTI8 2703 aaKnown RBP5.72□□□□□ -1.49
Syne1-201ENSMUST00000041639 Sec61bQ9CQS8 96 aaKnown RBP5.71□□□□□ -1.5
Syne1-201ENSMUST00000041639 Celsr2Q9R0M0 2920 aa5.7□□□□□ -1.5
Syne1-201ENSMUST00000041639 FcgbpE9Q0B5 2583 aa5.7□□□□□ -1.5
Syne1-201ENSMUST00000041639 Krtap10-4Q08EG8 221 aa5.7□□□□□ -1.5
Syne1-201ENSMUST00000041639 BC029722A0A0N4SW31 51 aa5.69□□□□□ -1.5
Syne1-201ENSMUST00000041639 Gm2310J3QNJ2 377 aa5.68□□□□□ -1.5
Syne1-201ENSMUST00000041639 Dchs2A0A0A6YW72 3346 aa5.68□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 79.6 ms