RNA–Protein interactions for RNA: ENSMUST00000027438.7

Ncl-201, Transcript of Nucleolin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncl, Length 8,202 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncl-201ENSMUST00000027438 SetxA2AKX3 2646 aa4.21□□□□□ -1.74
Ncl-201ENSMUST00000027438 PcntP48725 2898 aa4.2□□□□□ -1.74
Ncl-201ENSMUST00000027438 Gm9508A0A1W2P7W0 230 aa4.19□□□□□ -1.74
Ncl-201ENSMUST00000027438 Cep192E9Q4Y4 2514 aaKnown RBP4.18□□□□□ -1.74
Ncl-201ENSMUST00000027438 3110070M22RikQ9DAQ7 118 aa4.18□□□□□ -1.74
Ncl-201ENSMUST00000027438 2310050C09RikG5E8Z3 280 aa4.17□□□□□ -1.74
Ncl-201ENSMUST00000027438 Stab1Q8R4Y4 2571 aa4.16□□□□□ -1.74
Ncl-201ENSMUST00000027438 4933428G20RikQ9D3X4 101 aa4.16□□□□□ -1.74
Ncl-201ENSMUST00000027438 2310057N15RikQ9D6T8 200 aa4.16□□□□□ -1.74
Ncl-201ENSMUST00000027438 Rpl37Q9D823 97 aa4.16□□□□□ -1.74
Ncl-201ENSMUST00000027438 SpenQ62504 3644 aaKnown RBP4.15□□□□□ -1.74
Ncl-201ENSMUST00000027438 Gm10643Q3URG9 111 aa4.15□□□□□ -1.75
Ncl-201ENSMUST00000027438 Gm21887J3QQ04 176 aa4.14□□□□□ -1.75
Ncl-201ENSMUST00000027438 TrioQ0KL02 3102 aa4.14□□□□□ -1.75
Ncl-201ENSMUST00000027438 Tnp1P10856 55 aa4.13□□□□□ -1.75
Ncl-201ENSMUST00000027438 Gm10308Q9CVR5 141 aa4.12□□□□□ -1.75
Ncl-201ENSMUST00000027438 Vps13aQ5H8C4 3166 aa4.12□□□□□ -1.75
Ncl-201ENSMUST00000027438 Notch1Q01705 2531 aa4.11□□□□□ -1.75
Ncl-201ENSMUST00000027438 Gm36176A0A1W2P8D5 158 aa4.11□□□□□ -1.75
Ncl-201ENSMUST00000027438 A930033H14RikG5E8X6 103 aa4.11□□□□□ -1.75
Ncl-201ENSMUST00000027438 Gm884A2A9H6 3643 aa4.1□□□□□ -1.75
Ncl-201ENSMUST00000027438 Csmd2V9GX34 3611 aa4.1□□□□□ -1.75
Ncl-201ENSMUST00000027438 Lama2Q60675 3118 aaKnown RBP4.1□□□□□ -1.75
Ncl-201ENSMUST00000027438 Kmt2bO08550 2713 aa4.1□□□□□ -1.75
Ncl-201ENSMUST00000027438 Cox6b2Q80ZN9 88 aa4.1□□□□□ -1.75
Ncl-201ENSMUST00000027438 Prune2Q52KR3 3084 aa4.09□□□□□ -1.75
Ncl-201ENSMUST00000027438 Krtap16-1A2A5X5 502 aa4.09□□□□□ -1.76
Ncl-201ENSMUST00000027438 Krtap13O88375 197 aa4.09□□□□□ -1.76
Ncl-201ENSMUST00000027438 Bahcc1Q3UHR0 2643 aa4.09□□□□□ -1.76
Ncl-201ENSMUST00000027438 Dchs1E9PVD3 3291 aa4.08□□□□□ -1.76
Ncl-201ENSMUST00000027438 Frem2Q6NVD0 3160 aa4.08□□□□□ -1.76
Ncl-201ENSMUST00000027438 CenpfE9Q3P4 2997 aaKnown RBP4.07□□□□□ -1.76
Ncl-201ENSMUST00000027438 Lelp1Q9DAE3 120 aa4.06□□□□□ -1.76
Ncl-201ENSMUST00000027438 Gm9507D3Z5T3 223 aa4.06□□□□□ -1.76
Ncl-201ENSMUST00000027438 AtrQ9JKK8 2635 aa4.06□□□□□ -1.76
Ncl-201ENSMUST00000027438 Col6a3E9PWQ3 3284 aa4.05□□□□□ -1.76
Ncl-201ENSMUST00000027438 Gm2310J3QNJ2 377 aa4.04□□□□□ -1.76
Ncl-201ENSMUST00000027438 Cfap54Q8C6S9 3106 aa4.04□□□□□ -1.76
Ncl-201ENSMUST00000027438 Ranbp2Q9ERU9 3053 aaKnown RBP4.04□□□□□ -1.76
Ncl-201ENSMUST00000027438 Zfp292Q9Z2U2 2698 aa4.03□□□□□ -1.76
Ncl-201ENSMUST00000027438 Gm9918Q8BUR5 174 aa4.03□□□□□ -1.76
Ncl-201ENSMUST00000027438 Akap9Q70FJ1 3797 aa4.03□□□□□ -1.77
Ncl-201ENSMUST00000027438 4933415A04RikQ9D443 101 aa4.02□□□□□ -1.77
Ncl-201ENSMUST00000027438 Nbeal1E9PYP2 2688 aa4.02□□□□□ -1.77
Ncl-201ENSMUST00000027438 Mki67E9PVX6 3177 aaKnown RBP4.02□□□□□ -1.77
Ncl-201ENSMUST00000027438 Zfhx4Q9JJN2 3550 aa4.01□□□□□ -1.77
Ncl-201ENSMUST00000027438 Gm10139O88245 57 aa4.01□□□□□ -1.77
Ncl-201ENSMUST00000027438 Lrrc37aB1AWG4 3215 aa4□□□□□ -1.77
Ncl-201ENSMUST00000027438 Hectd1Q69ZR2 2618 aaKnown RBP4□□□□□ -1.77
Ncl-201ENSMUST00000027438 Bod1lE9Q6J5 3032 aa4□□□□□ -1.77
Ncl-201ENSMUST00000027438 Krtap10-4Q08EG8 221 aa4□□□□□ -1.77
Ncl-201ENSMUST00000027438 Prrc2cQ3TLH4 2846 aaKnown RBP4□□□□□ -1.77
Ncl-201ENSMUST00000027438 Unc79Q0KK59 2596 aa4□□□□□ -1.77
Ncl-201ENSMUST00000027438 Akap13E9Q394 2776 aa3.99□□□□□ -1.77
Ncl-201ENSMUST00000027438 Smim29Q8R043 75 aa3.99□□□□□ -1.77
Ncl-201ENSMUST00000027438 Myo18bE9PV66 2605 aa3.98□□□□□ -1.77
Ncl-201ENSMUST00000027438 Krtap10-10A0A1W2P7T6 217 aa3.98□□□□□ -1.77
Ncl-201ENSMUST00000027438 SpegQ62407 3262 aa3.97□□□□□ -1.77
Ncl-201ENSMUST00000027438 Col12a1Q60847 3120 aa3.96□□□□□ -1.78
Ncl-201ENSMUST00000027438 Gm7173A0A0G2JEB6 3132 aa3.96□□□□□ -1.78
Ncl-201ENSMUST00000027438 Itpr3P70227 2670 aa3.95□□□□□ -1.78
Ncl-201ENSMUST00000027438 Ndufaf8A2AMZ4 74 aa3.94□□□□□ -1.78
Ncl-201ENSMUST00000027438 FlnbQ80X90 2602 aaKnown RBP3.93□□□□□ -1.78
Ncl-201ENSMUST00000027438 Tep1P97499 2629 aa3.93□□□□□ -1.78
Ncl-201ENSMUST00000027438 Gm5965D3Z724 196 aa3.92□□□□□ -1.78
Ncl-201ENSMUST00000027438 Sprr1aQ62266 144 aa3.9□□□□□ -1.78
Ncl-201ENSMUST00000027438 Fam229bQ8CF36 80 aa3.9□□□□□ -1.78
Ncl-201ENSMUST00000027438 Rps29P62274 56 aa3.9□□□□□ -1.79
Ncl-201ENSMUST00000027438 Igsf10Q3V1M1 2594 aa3.9□□□□□ -1.79
Ncl-201ENSMUST00000027438 Rev3lQ61493 3122 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 HttP42859 3119 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 Sprr2kO70562 68 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 Eif4ebp3Q80VV3 101 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 Prr13Q9CQJ5 137 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 Gm16253D3Z167 63 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 Prm2P07978 107 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 Gm37013Q8K491 104 aa3.89□□□□□ -1.79
Ncl-201ENSMUST00000027438 Gcn1E9PVA8 2671 aaKnown RBP3.88□□□□□ -1.79
Ncl-201ENSMUST00000027438 Map1aQ9QYR6 2776 aa3.88□□□□□ -1.79
Ncl-201ENSMUST00000027438 RelnQ60841 3461 aa3.88□□□□□ -1.79
Ncl-201ENSMUST00000027438 D6Ertd527eA0A0N4SWI3 464 aa3.86□□□□□ -1.79
Ncl-201ENSMUST00000027438 Gm2696A0A1W2P709 240 aa3.86□□□□□ -1.79
Ncl-201ENSMUST00000027438 FlnaQ8BTM8 2647 aaKnown RBP3.86□□□□□ -1.79
Ncl-201ENSMUST00000027438 Tnrc18Q80WC3 2878 aa3.86□□□□□ -1.79
Ncl-201ENSMUST00000027438 AspmQ8CJ27 3122 aa3.85□□□□□ -1.79
Ncl-201ENSMUST00000027438 Gm9195A0A140LHT4 2805 aa3.85□□□□□ -1.79
Ncl-201ENSMUST00000027438 Chd7A2AJK6 2986 aaKnown RBP3.85□□□□□ -1.79
Ncl-201ENSMUST00000027438 Celsr3Q91ZI0 3301 aa3.84□□□□□ -1.79
Ncl-201ENSMUST00000027438 AtmQ62388 3066 aa3.83□□□□□ -1.8
Ncl-201ENSMUST00000027438 Celsr1O35161 3034 aa3.83□□□□□ -1.8
Ncl-201ENSMUST00000027438 Dmxl1Q6PNC0 3013 aa3.82□□□□□ -1.8
Ncl-201ENSMUST00000027438 Ash1lQ99MY8 2958 aa3.82□□□□□ -1.8
Ncl-201ENSMUST00000027438 FrylF8VQ05 3007 aa3.79□□□□□ -1.8
Ncl-201ENSMUST00000027438 Lama1P19137 3084 aa3.78□□□□□ -1.81
Ncl-201ENSMUST00000027438 9530053A07RikE9PVG8 2581 aa3.77□□□□□ -1.81
Ncl-201ENSMUST00000027438 MgaA2AWL7 3003 aaKnown RBP3.77□□□□□ -1.81
Ncl-201ENSMUST00000027438 Mast4Q811L6 2618 aa3.77□□□□□ -1.81
Ncl-201ENSMUST00000027438 Fbn2Q61555 2907 aa3.76□□□□□ -1.81
Ncl-201ENSMUST00000027438 BptfA2A654 3036 aaKnown RBP3.76□□□□□ -1.81
Ncl-201ENSMUST00000027438 Vps13cQ8BX70 3748 aa3.76□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 94.8 ms