RNA–Protein interactions for RNA: ENSMUST00000016781.6

Ift27-201, Transcript of Intraflagellar transport protein 27 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift27, Length 1,012 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27-201ENSMUST00000016781 Hbb-bsA8DUK4 147 aa7.45□□□□□ -1.22
Ift27-201ENSMUST00000016781 Hbb-b1P02088 147 aa7.45□□□□□ -1.22
Ift27-201ENSMUST00000016781 Igkv8-21A0A140T8P7 120 aa7.44□□□□□ -1.22
Ift27-201ENSMUST00000016781 Gm45753A0A1C7CYU8 86 aa7.44□□□□□ -1.22
Ift27-201ENSMUST00000016781 Krtap1-4Q3V2D6 188 aa7.44□□□□□ -1.22
Ift27-201ENSMUST00000016781 Lst1O08843 95 aa7.43□□□□□ -1.22
Ift27-201ENSMUST00000016781 Igkv8-28A0A0G2JE47 121 aa7.42□□□□□ -1.22
Ift27-201ENSMUST00000016781 Plac1Q9JI83 173 aa7.42□□□□□ -1.22
Ift27-201ENSMUST00000016781 Xlr5cQ9JJR2 179 aa7.42□□□□□ -1.22
Ift27-201ENSMUST00000016781 Gm11596B1AQB0 205 aa7.41□□□□□ -1.22
Ift27-201ENSMUST00000016781 Gm44965A0A0N4SVR3 59 aa7.39□□□□□ -1.23
Ift27-201ENSMUST00000016781 Gm11555B1AQ89 175 aa7.39□□□□□ -1.23
Ift27-201ENSMUST00000016781 MalO09198 153 aa7.39□□□□□ -1.23
Ift27-201ENSMUST00000016781 4930535I16RikQ9CUI2 172 aa7.39□□□□□ -1.23
Ift27-201ENSMUST00000016781 Trav12-3A0A075B648 115 aa7.38□□□□□ -1.23
Ift27-201ENSMUST00000016781 Triap1Q9D8Z2 76 aa7.38□□□□□ -1.23
Ift27-201ENSMUST00000016781 Glrp1E9Q9S8 174 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Hist1h2bmP10854 126 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Cops9Q3U898 57 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Hist1h2bhQ64478 126 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Hist2h2bbQ64525 126 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Hist1h2bcQ6ZWY9 126 aaKnown RBP7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 A730071L15RikQ8C4X0 137 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Lage3Q9CR70 148 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Rpl37Q9D823 97 aa7.37□□□□□ -1.23
Ift27-201ENSMUST00000016781 Cox8bP48772 70 aa7.36□□□□□ -1.23
Ift27-201ENSMUST00000016781 Q8BT88 171 aa7.35□□□□□ -1.23
Ift27-201ENSMUST00000016781 Vmn1r197Q8R265 298 aa7.35□□□□□ -1.23
Ift27-201ENSMUST00000016781 Gm16253D3Z167 63 aa7.34□□□□□ -1.23
Ift27-201ENSMUST00000016781 Gm5142Q8C5X9 133 aa7.34□□□□□ -1.23
Ift27-201ENSMUST00000016781 Timm17bQ9Z0V7 172 aa7.34□□□□□ -1.23
Ift27-201ENSMUST00000016781 Gm26620Q9CY65 116 aa7.33□□□□□ -1.24
Ift27-201ENSMUST00000016781 Gm10401E9Q3K6 71 aa7.32□□□□□ -1.24
Ift27-201ENSMUST00000016781 Stard4Q99JV5 224 aa7.32□□□□□ -1.24
Ift27-201ENSMUST00000016781 Gm5868Q8BJG1 145 aa7.3□□□□□ -1.24
Ift27-201ENSMUST00000016781 Dnal4Q9DCM4 105 aa7.3□□□□□ -1.24
Ift27-201ENSMUST00000016781 Trav4d-3A0A075B625 110 aa7.29□□□□□ -1.24
Ift27-201ENSMUST00000016781 Fam229aB2KGE5 128 aa7.29□□□□□ -1.24
Ift27-201ENSMUST00000016781 Gm9376G3UW68 176 aa7.29□□□□□ -1.24
Ift27-201ENSMUST00000016781 SelenowP63300 88 aa7.29□□□□□ -1.24
Ift27-201ENSMUST00000016781 Gm37389A0A0A6YW05 95 aa7.28□□□□□ -1.24
Ift27-201ENSMUST00000016781 Ighv10-1A0A0B4J1J6 119 aa7.28□□□□□ -1.24
Ift27-201ENSMUST00000016781 Trappc1Q5NCF2 145 aa7.28□□□□□ -1.24
Ift27-201ENSMUST00000016781 Trav4n-4A0A075B615 110 aa7.27□□□□□ -1.25
Ift27-201ENSMUST00000016781 Dpm2Q9Z324 84 aa7.27□□□□□ -1.25
Ift27-201ENSMUST00000016781 Lce1jD3YUU5 139 aa7.26□□□□□ -1.25
Ift27-201ENSMUST00000016781 Plscr4P58196 326 aa7.26□□□□□ -1.25
Ift27-201ENSMUST00000016781 1700018G05RikA0A1B0GSI2 66 aa7.25□□□□□ -1.25
Ift27-201ENSMUST00000016781 Gm10604Q3V0X7 143 aa7.25□□□□□ -1.25
Ift27-201ENSMUST00000016781 Krtap4-6Q3V4B7 195 aa7.24□□□□□ -1.25
Ift27-201ENSMUST00000016781 Gm10295Q8CCF3 114 aa7.24□□□□□ -1.25
Ift27-201ENSMUST00000016781 Hist2h2beQ64524 126 aa7.23□□□□□ -1.25
Ift27-201ENSMUST00000016781 Eif4ebp3Q80VV3 101 aa7.23□□□□□ -1.25
Ift27-201ENSMUST00000016781 Igkv8-30A0A140T8M3 121 aa7.22□□□□□ -1.25
Ift27-201ENSMUST00000016781 Gm10308Q9CVR5 141 aa7.22□□□□□ -1.25
Ift27-201ENSMUST00000016781 Muc5bE9Q5I3 4800 aa7.21□□□□□ -1.26
Ift27-201ENSMUST00000016781 Mdn1A2ANY6 5589 aaKnown RBP7.2□□□□□ -1.26
Ift27-201ENSMUST00000016781 Vamp3P63024 103 aa7.2□□□□□ -1.26
Ift27-201ENSMUST00000016781 Gm20458E9PXJ7 78 aa7.19□□□□□ -1.26
Ift27-201ENSMUST00000016781 P06320 134 aa7.19□□□□□ -1.26
Ift27-201ENSMUST00000016781 Smim26Q3V460 107 aa7.19□□□□□ -1.26
Ift27-201ENSMUST00000016781 SnrpeP62305 92 aaKnown RBP7.18□□□□□ -1.26
Ift27-201ENSMUST00000016781 Chchd10Q7TNL9 138 aa7.18□□□□□ -1.26
Ift27-201ENSMUST00000016781 Rpl39lQ9CQD0 51 aa7.17□□□□□ -1.26
Ift27-201ENSMUST00000016781 Gnb1lQ9EQ15 326 aa7.17□□□□□ -1.26
Ift27-201ENSMUST00000016781 Cypt15B1AXS0 87 aa7.15□□□□□ -1.26
Ift27-201ENSMUST00000016781 B930094E09RikQ8C4T2 136 aa7.12□□□□□ -1.27
Ift27-201ENSMUST00000016781 Smim1P0C8K7 78 aa7.1□□□□□ -1.27
Ift27-201ENSMUST00000016781 Krtap4-1Q3UUY3 169 aa7.1□□□□□ -1.27
Ift27-201ENSMUST00000016781 Igkv2-109A0A075B5K6 120 aa7.09□□□□□ -1.27
Ift27-201ENSMUST00000016781 Igkv1-35A0A0G2JDE5 120 aa7.09□□□□□ -1.27
Ift27-201ENSMUST00000016781 1700020N15RikL7MTX3 112 aa7.08□□□□□ -1.28
Ift27-201ENSMUST00000016781 Cox6a2P43023 97 aa7.08□□□□□ -1.28
Ift27-201ENSMUST00000016781 Defb45Q3V490 66 aa7.08□□□□□ -1.28
Ift27-201ENSMUST00000016781 Rnase13Q5GAM7 153 aa7.08□□□□□ -1.28
Ift27-201ENSMUST00000016781 Rab37Q9JKM7 223 aa7.08□□□□□ -1.28
Ift27-201ENSMUST00000016781 Ighv10-3A0A075B5T6 119 aa7.07□□□□□ -1.28
Ift27-201ENSMUST00000016781 Trav3-4A0A075B654 114 aa7.07□□□□□ -1.28
Ift27-201ENSMUST00000016781 Igkv3-3A0A140T8Q0 119 aa7.07□□□□□ -1.28
Ift27-201ENSMUST00000016781 7530416G11RikJ3QJX6 159 aa7.07□□□□□ -1.28
Ift27-201ENSMUST00000016781 Grcc10O35127 126 aa7.06□□□□□ -1.28
Ift27-201ENSMUST00000016781 Hist1h2bfP10853 126 aa7.06□□□□□ -1.28
Ift27-201ENSMUST00000016781 Hist1h2bbQ64475 126 aa7.06□□□□□ -1.28
Ift27-201ENSMUST00000016781 Hist1h2bkQ8CGP1 126 aaKnown RBP7.06□□□□□ -1.28
Ift27-201ENSMUST00000016781 Hist1h2bpQ8CGP2 126 aaKnown RBP7.06□□□□□ -1.28
Ift27-201ENSMUST00000016781 Gemin7Q9CWY4 129 aa7.05□□□□□ -1.28
Ift27-201ENSMUST00000016781 Igkv8-19A0A0G2JFN8 121 aa7.04□□□□□ -1.28
Ift27-201ENSMUST00000016781 Sfta2E9PXB6 77 aa7.04□□□□□ -1.28
Ift27-201ENSMUST00000016781 Sigmar1O55242 223 aa7.04□□□□□ -1.28
Ift27-201ENSMUST00000016781 Ndufv3Q8BK30 104 aaKnown RBP7.04□□□□□ -1.28
Ift27-201ENSMUST00000016781 Hist3h2bbQ8CGP0 126 aa7.04□□□□□ -1.28
Ift27-201ENSMUST00000016781 Hist3h2baQ9D2U9 126 aa7.04□□□□□ -1.28
Ift27-201ENSMUST00000016781 Ifitm6A0A1B0GS75 124 aa7.03□□□□□ -1.28
Ift27-201ENSMUST00000016781 Gm16381A0A1Y7VKT9 73 aa7.03□□□□□ -1.28
Ift27-201ENSMUST00000016781 Cend1Q9JKC6 149 aa7.03□□□□□ -1.28
Ift27-201ENSMUST00000016781 IqcjQ8BPW0 110 aa7.01□□□□□ -1.29
Ift27-201ENSMUST00000016781 Vps25Q9CQ80 176 aa7.01□□□□□ -1.29
Ift27-201ENSMUST00000016781 Chtf8P0CG14 533 aa7□□□□□ -1.29
Ift27-201ENSMUST00000016781 9530003J23RikQ8BM26 151 aa7□□□□□ -1.29
Ift27-201ENSMUST00000016781 C130032M10RikQ8C888 123 aa7□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 95.1 ms