RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Fn1P11276 2477 aaKnown RBP5.67□□□□□ -1.5
Sptbn1-202ENSMUST00000011877 Rps29P62274 56 aa5.67□□□□□ -1.5
Sptbn1-202ENSMUST00000011877 Tnp2P11378 117 aa5.66□□□□□ -1.5
Sptbn1-202ENSMUST00000011877 Gm2310J3QNJ2 377 aa5.64□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 Gm9507D3Z5T3 223 aa5.63□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 Abca12E9Q876 2595 aa5.62□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 Gm21887J3QQ04 176 aa5.62□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 Gm3646F6S692 53 aa5.62□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 Jbts17Q8CE72 3214 aa5.62□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 Cox6b2Q80ZN9 88 aa5.61□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 PcntP48725 2898 aa5.59□□□□□ -1.51
Sptbn1-202ENSMUST00000011877 Stab1Q8R4Y4 2571 aa5.55□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 Tnp1P10856 55 aa5.55□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 Myo18bE9PV66 2605 aa5.55□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 Akap13E9Q394 2776 aa5.55□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 Notch1Q01705 2531 aa5.55□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 AtrQ9JKK8 2635 aa5.54□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 Krtap14O08640 167 aa5.53□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 Krtap10-4Q08EG8 221 aa5.53□□□□□ -1.52
Sptbn1-202ENSMUST00000011877 SrcapA0A087WQ44 3271 aa5.51□□□□□ -1.53
Sptbn1-202ENSMUST00000011877 A730071L15RikQ8C4X0 137 aa5.49□□□□□ -1.53
Sptbn1-202ENSMUST00000011877 Krtap10-10A0A1W2P7T6 217 aa5.49□□□□□ -1.53
Sptbn1-202ENSMUST00000011877 FlnbQ80X90 2602 aaKnown RBP5.48□□□□□ -1.53
Sptbn1-202ENSMUST00000011877 Golgb1E9PVZ8 3238 aa5.47□□□□□ -1.53
Sptbn1-202ENSMUST00000011877 2310057N15RikQ9D6T8 200 aa5.44□□□□□ -1.54
Sptbn1-202ENSMUST00000011877 Cystm1Q8K353 104 aa5.44□□□□□ -1.54
Sptbn1-202ENSMUST00000011877 Gm9195A0A140LHT4 2805 aa5.43□□□□□ -1.54
Sptbn1-202ENSMUST00000011877 FlnaQ8BTM8 2647 aaKnown RBP5.41□□□□□ -1.54
Sptbn1-202ENSMUST00000011877 Hectd1Q69ZR2 2618 aaKnown RBP5.41□□□□□ -1.54
Sptbn1-202ENSMUST00000011877 A930033H14RikG5E8X6 103 aa5.39□□□□□ -1.55
Sptbn1-202ENSMUST00000011877 D6Ertd527eA0A0N4SWI3 464 aa5.39□□□□□ -1.55
Sptbn1-202ENSMUST00000011877 2310061N02RikQ9D6S9 174 aa5.39□□□□□ -1.55
Sptbn1-202ENSMUST00000011877 Ndufaf8A2AMZ4 74 aa5.36□□□□□ -1.55
Sptbn1-202ENSMUST00000011877 Gm5965D3Z724 196 aa5.35□□□□□ -1.55
Sptbn1-202ENSMUST00000011877 Prrc2cQ3TLH4 2846 aaKnown RBP5.34□□□□□ -1.55
Sptbn1-202ENSMUST00000011877 Gm2696A0A1W2P709 240 aa5.34□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 Zfp292Q9Z2U2 2698 aa5.34□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 9530053A07RikE9PVG8 2581 aa5.32□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 Gm40193A0A1B0GT39 78 aa5.32□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 NipblQ6KCD5 2798 aaKnown RBP5.31□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 4933415A04RikQ9D443 101 aa5.3□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 1700042G07RikB1AUF7 90 aa5.3□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 Gcn1E9PVA8 2671 aaKnown RBP5.29□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 Map1aQ9QYR6 2776 aa5.29□□□□□ -1.56
Sptbn1-202ENSMUST00000011877 Gm9112A2AI92 75 aa5.24□□□□□ -1.57
Sptbn1-202ENSMUST00000011877 Gm42715A0A087WP63 3095 aaKnown RBP5.23□□□□□ -1.57
Sptbn1-202ENSMUST00000011877 Igsf10Q3V1M1 2594 aa5.22□□□□□ -1.57
Sptbn1-202ENSMUST00000011877 Prune2Q52KR3 3084 aa5.21□□□□□ -1.58
Sptbn1-202ENSMUST00000011877 Dnah12Q3V0Q1 3086 aa5.19□□□□□ -1.58
Sptbn1-202ENSMUST00000011877 UtrnE9Q6R7 3430 aa5.18□□□□□ -1.58
Sptbn1-202ENSMUST00000011877 Ash1lQ99MY8 2958 aa5.15□□□□□ -1.58
Sptbn1-202ENSMUST00000011877 Bod1lE9Q6J5 3032 aa5.15□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 Mast4Q811L6 2618 aa5.14□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 Ep400Q8CHI8 3072 aaKnown RBP5.13□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 Tep1P97499 2629 aa5.12□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 Cep350E9Q309 3095 aa5.11□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 CenpfE9Q3P4 2997 aaKnown RBP5.1□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 Itpr3P70227 2670 aa5.09□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 Prm2P07978 107 aa5.09□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 4933428G20RikQ9D3X4 101 aa5.09□□□□□ -1.59
Sptbn1-202ENSMUST00000011877 B930094E09RikQ8C4T2 136 aa5.08□□□□□ -1.6
Sptbn1-202ENSMUST00000011877 Gm9918Q8BUR5 174 aa5.07□□□□□ -1.6
Sptbn1-202ENSMUST00000011877 Stab2Q8R4U0 2559 aa5.04□□□□□ -1.6
Sptbn1-202ENSMUST00000011877 Chd6A3KFM7 2711 aa5.03□□□□□ -1.6
Sptbn1-202ENSMUST00000011877 ApcQ61315 2845 aa4.99□□□□□ -1.61
Sptbn1-202ENSMUST00000011877 Ranbp2Q9ERU9 3053 aaKnown RBP4.98□□□□□ -1.61
Sptbn1-202ENSMUST00000011877 Nbeal2Q6ZQA0 2742 aa4.98□□□□□ -1.61
Sptbn1-202ENSMUST00000011877 Itpr2Q9Z329 2701 aa4.94□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 Gm20537G3UYK7 97 aa4.93□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 Mki67E9PVX6 3177 aaKnown RBP4.92□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 Dmxl1Q6PNC0 3013 aa4.92□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 Gm17416Q30KP4 66 aa4.91□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 Ubr5Q80TP3 2792 aa4.91□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 Lama2Q60675 3118 aaKnown RBP4.91□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 MgaA2AWL7 3003 aaKnown RBP4.9□□□□□ -1.62
Sptbn1-202ENSMUST00000011877 Col6a5A6H584 2640 aa4.9□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 Itpr1P11881 2749 aa4.89□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 Pkd1l1Q8R526 2615 aa4.89□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 FcgbpE9Q0B5 2583 aa4.88□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 KalrnA2CG49 2964 aa4.87□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 Utp20Q5XG71 2788 aaKnown RBP4.87□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 Gm17402F6Z0L5 76 aa4.86□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 Tex15F8VPN2 2785 aa4.85□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 Lama3Q61789 3330 aa4.85□□□□□ -1.63
Sptbn1-202ENSMUST00000011877 Gm9736A0A1W2P7N1 277 aa4.83□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 Tnrc18Q80WC3 2878 aa4.83□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 Wdfy4E9Q2M9 3149 aa4.82□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 2210017I01RikA0A0A6YVV1 95 aa4.81□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 Srrm2Q8BTI8 2703 aaKnown RBP4.81□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 Rev3lQ61493 3122 aa4.8□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 Unc80Q8BLN6 3261 aa4.8□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 Gm19668J3QMD1 248 aa4.79□□□□□ -1.64
Sptbn1-202ENSMUST00000011877 DspE9Q557 2883 aaKnown RBP4.75□□□□□ -1.65
Sptbn1-202ENSMUST00000011877 Zfhx3Q61329 3726 aa4.75□□□□□ -1.65
Sptbn1-202ENSMUST00000011877 TrioQ0KL02 3102 aa4.74□□□□□ -1.65
Sptbn1-202ENSMUST00000011877 Dmxl2Q8BPN8 3032 aa4.74□□□□□ -1.65
Sptbn1-202ENSMUST00000011877 2310079G19RikQ9D6L6 185 aa4.74□□□□□ -1.65
Sptbn1-202ENSMUST00000011877 Col12a1Q60847 3120 aa4.73□□□□□ -1.65
Sptbn1-202ENSMUST00000011877 BptfA2A654 3036 aaKnown RBP4.72□□□□□ -1.65
Sptbn1-202ENSMUST00000011877 Igfn1Q3KNY0 2849 aa4.71□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms