RNA–Protein interactions for RNA: ENSMUST00000005532.8

Nid1-201, Transcript of Nidogen-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nid1, Length 6,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1-201ENSMUST00000005532 Ankrd11E9Q4F7 2643 aa8.91□□□□□ -0.98
Nid1-201ENSMUST00000005532 2310050C09RikG5E8Z3 280 aa8.9□□□□□ -0.98
Nid1-201ENSMUST00000005532 BC029722A0A0N4SW31 51 aa8.89□□□□□ -0.99
Nid1-201ENSMUST00000005532 Gm19426M0QWC7 77 aa8.88□□□□□ -0.99
Nid1-201ENSMUST00000005532 AtrQ9JKK8 2635 aa8.87□□□□□ -0.99
Nid1-201ENSMUST00000005532 Gm36176A0A1W2P8D5 158 aa8.87□□□□□ -0.99
Nid1-201ENSMUST00000005532 Zfp292Q9Z2U2 2698 aa8.86□□□□□ -0.99
Nid1-201ENSMUST00000005532 Sec61bQ9CQS8 96 aaKnown RBP8.84□□□□□ -0.99
Nid1-201ENSMUST00000005532 HrnrQ8VHD8 2496 aa8.82□□□□□ -1
Nid1-201ENSMUST00000005532 FasnP19096 2504 aaKnown RBP8.81□□□□□ -1
Nid1-201ENSMUST00000005532 Golgb1E9PVZ8 3238 aa8.8□□□□□ -1
Nid1-201ENSMUST00000005532 Krtap13O88375 197 aa8.8□□□□□ -1
Nid1-201ENSMUST00000005532 Cox6b2Q80ZN9 88 aa8.8□□□□□ -1
Nid1-201ENSMUST00000005532 Gm9195A0A140LHT4 2805 aa8.79□□□□□ -1
Nid1-201ENSMUST00000005532 Myo18bE9PV66 2605 aa8.76□□□□□ -1.01
Nid1-201ENSMUST00000005532 Akap13E9Q394 2776 aa8.74□□□□□ -1.01
Nid1-201ENSMUST00000005532 Gcn1E9PVA8 2671 aaKnown RBP8.7□□□□□ -1.02
Nid1-201ENSMUST00000005532 Hectd1Q69ZR2 2618 aaKnown RBP8.69□□□□□ -1.02
Nid1-201ENSMUST00000005532 Ndufaf8A2AMZ4 74 aa8.68□□□□□ -1.02
Nid1-201ENSMUST00000005532 Krtap14O08640 167 aa8.67□□□□□ -1.02
Nid1-201ENSMUST00000005532 Dnah12Q3V0Q1 3086 aa8.64□□□□□ -1.03
Nid1-201ENSMUST00000005532 FlnaQ8BTM8 2647 aaKnown RBP8.63□□□□□ -1.03
Nid1-201ENSMUST00000005532 Usp24B1AY13 2617 aaKnown RBP8.62□□□□□ -1.03
Nid1-201ENSMUST00000005532 Gm9507D3Z5T3 223 aa8.6□□□□□ -1.03
Nid1-201ENSMUST00000005532 Rps29P62274 56 aa8.6□□□□□ -1.03
Nid1-201ENSMUST00000005532 D6Ertd527eA0A0N4SWI3 464 aa8.57□□□□□ -1.04
Nid1-201ENSMUST00000005532 Prrc2cQ3TLH4 2846 aaKnown RBP8.55□□□□□ -1.04
Nid1-201ENSMUST00000005532 2310061N02RikQ9D6S9 174 aa8.54□□□□□ -1.04
Nid1-201ENSMUST00000005532 Ep400Q8CHI8 3072 aaKnown RBP8.52□□□□□ -1.05
Nid1-201ENSMUST00000005532 Gm42715A0A087WP63 3095 aaKnown RBP8.51□□□□□ -1.05
Nid1-201ENSMUST00000005532 Tnp2P11378 117 aa8.51□□□□□ -1.05
Nid1-201ENSMUST00000005532 Fn1P11276 2477 aaKnown RBP8.51□□□□□ -1.05
Nid1-201ENSMUST00000005532 Krtap10-4Q08EG8 221 aa8.48□□□□□ -1.05
Nid1-201ENSMUST00000005532 Jbts17Q8CE72 3214 aa8.46□□□□□ -1.06
Nid1-201ENSMUST00000005532 Bod1lE9Q6J5 3032 aa8.44□□□□□ -1.06
Nid1-201ENSMUST00000005532 Gm21887J3QQ04 176 aa8.43□□□□□ -1.06
Nid1-201ENSMUST00000005532 Igsf10Q3V1M1 2594 aa8.41□□□□□ -1.06
Nid1-201ENSMUST00000005532 UtrnE9Q6R7 3430 aa8.41□□□□□ -1.06
Nid1-201ENSMUST00000005532 Gm9112A2AI92 75 aa8.41□□□□□ -1.06
Nid1-201ENSMUST00000005532 Cep350E9Q309 3095 aa8.39□□□□□ -1.07
Nid1-201ENSMUST00000005532 Prune2Q52KR3 3084 aa8.39□□□□□ -1.07
Nid1-201ENSMUST00000005532 Itpr3P70227 2670 aa8.38□□□□□ -1.07
Nid1-201ENSMUST00000005532 PcntP48725 2898 aa8.37□□□□□ -1.07
Nid1-201ENSMUST00000005532 Notch1Q01705 2531 aa8.37□□□□□ -1.07
Nid1-201ENSMUST00000005532 Krtap10-10A0A1W2P7T6 217 aa8.36□□□□□ -1.07
Nid1-201ENSMUST00000005532 Kmt2bO08550 2713 aa8.33□□□□□ -1.08
Nid1-201ENSMUST00000005532 Gm40193A0A1B0GT39 78 aa8.31□□□□□ -1.08
Nid1-201ENSMUST00000005532 Stab1Q8R4Y4 2571 aa8.3□□□□□ -1.08
Nid1-201ENSMUST00000005532 Mast4Q811L6 2618 aa8.28□□□□□ -1.08
Nid1-201ENSMUST00000005532 Map1aQ9QYR6 2776 aa8.27□□□□□ -1.09
Nid1-201ENSMUST00000005532 Tnp1P10856 55 aa8.25□□□□□ -1.09
Nid1-201ENSMUST00000005532 Myo15bI7HPW8 3033 aa8.25□□□□□ -1.09
Nid1-201ENSMUST00000005532 Gm20537G3UYK7 97 aa8.23□□□□□ -1.09
Nid1-201ENSMUST00000005532 NipblQ6KCD5 2798 aaKnown RBP8.23□□□□□ -1.09
Nid1-201ENSMUST00000005532 Itpr1P11881 2749 aa8.21□□□□□ -1.1
Nid1-201ENSMUST00000005532 Lama2Q60675 3118 aaKnown RBP8.14□□□□□ -1.11
Nid1-201ENSMUST00000005532 Tep1P97499 2629 aa8.13□□□□□ -1.11
Nid1-201ENSMUST00000005532 Gm2696A0A1W2P709 240 aa8.13□□□□□ -1.11
Nid1-201ENSMUST00000005532 Chd6A3KFM7 2711 aa8.12□□□□□ -1.11
Nid1-201ENSMUST00000005532 Dmxl1Q6PNC0 3013 aa8.11□□□□□ -1.11
Nid1-201ENSMUST00000005532 TrioQ0KL02 3102 aa8.1□□□□□ -1.11
Nid1-201ENSMUST00000005532 Ranbp2Q9ERU9 3053 aaKnown RBP8.09□□□□□ -1.11
Nid1-201ENSMUST00000005532 Gm5965D3Z724 196 aa8.08□□□□□ -1.12
Nid1-201ENSMUST00000005532 9530053A07RikE9PVG8 2581 aa8.08□□□□□ -1.12
Nid1-201ENSMUST00000005532 Chd7A2AJK6 2986 aaKnown RBP8.07□□□□□ -1.12
Nid1-201ENSMUST00000005532 Col12a1Q60847 3120 aa8.06□□□□□ -1.12
Nid1-201ENSMUST00000005532 MgaA2AWL7 3003 aaKnown RBP8.05□□□□□ -1.12
Nid1-201ENSMUST00000005532 Lama3Q61789 3330 aa8.05□□□□□ -1.12
Nid1-201ENSMUST00000005532 Ash1lQ99MY8 2958 aa8.03□□□□□ -1.12
Nid1-201ENSMUST00000005532 Tnrc18Q80WC3 2878 aa8.03□□□□□ -1.12
Nid1-201ENSMUST00000005532 B930094E09RikQ8C4T2 136 aa8.02□□□□□ -1.13
Nid1-201ENSMUST00000005532 2310057N15RikQ9D6T8 200 aa8□□□□□ -1.13
Nid1-201ENSMUST00000005532 A930033H14RikG5E8X6 103 aa7.96□□□□□ -1.13
Nid1-201ENSMUST00000005532 Nbeal2Q6ZQA0 2742 aa7.95□□□□□ -1.14
Nid1-201ENSMUST00000005532 Mki67E9PVX6 3177 aaKnown RBP7.95□□□□□ -1.14
Nid1-201ENSMUST00000005532 Ubr5Q80TP3 2792 aa7.94□□□□□ -1.14
Nid1-201ENSMUST00000005532 2310079G19RikQ9D6L6 185 aa7.93□□□□□ -1.14
Nid1-201ENSMUST00000005532 Usp34Q6ZQ93 3582 aa7.92□□□□□ -1.14
Nid1-201ENSMUST00000005532 Gm7173A0A0G2JEB6 3132 aa7.92□□□□□ -1.14
Nid1-201ENSMUST00000005532 Stab2Q8R4U0 2559 aa7.9□□□□□ -1.14
Nid1-201ENSMUST00000005532 Rev3lQ61493 3122 aa7.9□□□□□ -1.14
Nid1-201ENSMUST00000005532 Prm2P07978 107 aa7.88□□□□□ -1.15
Nid1-201ENSMUST00000005532 Cfap54Q8C6S9 3106 aa7.87□□□□□ -1.15
Nid1-201ENSMUST00000005532 Fbn2Q61555 2907 aa7.86□□□□□ -1.15
Nid1-201ENSMUST00000005532 HttP42859 3119 aa7.84□□□□□ -1.15
Nid1-201ENSMUST00000005532 TgO08710 2766 aa7.83□□□□□ -1.16
Nid1-201ENSMUST00000005532 Pkd1l1Q8R526 2615 aa7.81□□□□□ -1.16
Nid1-201ENSMUST00000005532 Col6a5A6H584 2640 aa7.76□□□□□ -1.17
Nid1-201ENSMUST00000005532 KalrnA2CG49 2964 aa7.76□□□□□ -1.17
Nid1-201ENSMUST00000005532 Tenm4Q3UHK6 2771 aa7.73□□□□□ -1.17
Nid1-201ENSMUST00000005532 ApcQ61315 2845 aa7.73□□□□□ -1.17
Nid1-201ENSMUST00000005532 Igfn1Q3KNY0 2849 aa7.73□□□□□ -1.17
Nid1-201ENSMUST00000005532 Muc2Q80Z19 2680 aa7.72□□□□□ -1.17
Nid1-201ENSMUST00000005532 Zfhx3Q61329 3726 aa7.7□□□□□ -1.18
Nid1-201ENSMUST00000005532 Srrm2Q8BTI8 2703 aaKnown RBP7.69□□□□□ -1.18
Nid1-201ENSMUST00000005532 Frem2Q6NVD0 3160 aa7.69□□□□□ -1.18
Nid1-201ENSMUST00000005532 Cdh23Q99PF4 3354 aa7.69□□□□□ -1.18
Nid1-201ENSMUST00000005532 Celsr1O35161 3034 aa7.68□□□□□ -1.18
Nid1-201ENSMUST00000005532 Itpr2Q9Z329 2701 aa7.67□□□□□ -1.18
Nid1-201ENSMUST00000005532 Gm17416Q30KP4 66 aa7.65□□□□□ -1.18
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms