RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Gm5153P01627 120 aa11.67□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Defa20Q45VN2 95 aa11.67□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Dmac1Q9CQ00 111 aa11.67□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Ociad2Q9D8W7 154 aa11.66□□□□□ -0.54
Scn1b-203ENSMUST00000211945 BC107364E9Q5A2 140 aa11.65□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Gm10549Q3URY4 149 aa11.65□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Adm2Q7TNK8 150 aa11.65□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Smim29Q8R043 75 aa11.65□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Gemin7Q9CWY4 129 aa11.65□□□□□ -0.54
Scn1b-203ENSMUST00000211945 Kiaa1109A2AAE1 5005 aa11.65□□□□□ -0.54
Scn1b-203ENSMUST00000211945 P01819 144 aa11.65□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Lrp1bQ9JI18 4599 aa11.64□□□□□ -0.55
Scn1b-203ENSMUST00000211945 S100a8P27005 89 aa11.64□□□□□ -0.55
Scn1b-203ENSMUST00000211945 6030445D17RikE9Q8F9 148 aa11.63□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Krtap14O08640 167 aa11.63□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Igkv1-117A0A140T8M0 119 aa11.62□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Defa7P50705 93 aa11.61□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Defa13P50711 93 aa11.61□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Klk12B2RVZ0 247 aa11.6□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Ube2bP63147 152 aa11.6□□□□□ -0.55
Scn1b-203ENSMUST00000211945 Mrpl52Q9D0Y8 121 aa11.59□□□□□ -0.55
Scn1b-203ENSMUST00000211945 PcloQ9QYX7 5068 aa11.59□□□□□ -0.55
Scn1b-203ENSMUST00000211945 BC048502Q80Y74 154 aa11.58□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Ly6hQ9WUC3 139 aa11.58□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Gm10770F7D043 238 aa11.57□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Eif4ebp3Q80VV3 101 aa11.57□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Vpreb2P13373 142 aa11.56□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Defa4P28311 92 aa11.56□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Wfdc10Q3V2J9 124 aa11.56□□□□□ -0.56
Scn1b-203ENSMUST00000211945 2310034G01RikA0A286YDL3 209 aa11.55□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Smim13E9Q942 88 aa11.55□□□□□ -0.56
Scn1b-203ENSMUST00000211945 SelenowP63300 88 aa11.55□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Fat2Q5F226 4351 aa11.55□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Gm10570F6VB42 170 aa11.55□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Gm9805F6YK59 57 aa11.55□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Gm11011D3Z3L9 86 aa11.54□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Lgals4Q8K419 326 aa11.54□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Vmn1r197Q8R265 298 aa11.54□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Gm17521F6QAC8 156 aa11.53□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Gm28051J3QMA2 81 aa11.53□□□□□ -0.56
Scn1b-203ENSMUST00000211945 P01843 105 aa11.53□□□□□ -0.56
Scn1b-203ENSMUST00000211945 5930422O12RikQ8C4Y4 123 aa11.53□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Spata45Q9CVW4 97 aa11.53□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Cd164Q9R0L9 197 aa11.53□□□□□ -0.56
Scn1b-203ENSMUST00000211945 Smr3aQ61900 147 aa11.52□□□□□ -0.57
Scn1b-203ENSMUST00000211945 CckP09240 115 aa11.5□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Rpl37aP61514 92 aa11.5□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Fam19a3Q7TPG6 132 aa11.5□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Gm7276Q3TYW4 209 aa11.5□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Q8K1L6 76 aa11.5□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Tac4Q99N14 128 aa11.5□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Rab37Q9JKM7 223 aa11.5□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Gm5142Q8C5X9 133 aa11.49□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Dnhd1D3Z2X2 4750 aa11.47□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Defa22Q8C1N8 93 aa11.47□□□□□ -0.57
Scn1b-203ENSMUST00000211945 HrnrQ8VHD8 2496 aa11.47□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Krtap19-5O08632 62 aa11.46□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Gm10642Q3TWM1 71 aa11.46□□□□□ -0.57
Scn1b-203ENSMUST00000211945 Abca13Q5SSE9 5034 aa11.46□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Gm11027G8JL69 66 aa11.45□□□□□ -0.58
Scn1b-203ENSMUST00000211945 D130052B06RikQ3UW13 202 aa11.45□□□□□ -0.58
Scn1b-203ENSMUST00000211945 5730596B20RikQ8BQ08 205 aa11.45□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Q9DAA7 145 aa11.45□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Gm18596A0A1W2P860 280 aa11.45□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Msrb1Q9JLC3 116 aa11.45□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Fat3Q8BNA6 4555 aa11.45□□□□□ -0.58
Scn1b-203ENSMUST00000211945 HydinQ80W93 5154 aa11.44□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Trav13n-2A0A0G2JF93 110 aa11.44□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Smim26Q3V460 107 aa11.44□□□□□ -0.58
Scn1b-203ENSMUST00000211945 AI606181Q8C7B9 129 aa11.44□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Elof1P60003 83 aa11.43□□□□□ -0.58
Scn1b-203ENSMUST00000211945 G0s2Q61585 103 aa11.43□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Gm27235Q3UW50 83 aa11.42□□□□□ -0.58
Scn1b-203ENSMUST00000211945 LbhQ9CX60 105 aa11.42□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Phpt1Q9DAK9 124 aa11.42□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Dnal4Q9DCM4 105 aa11.42□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Igkv3-7A0A0G2JE31 119 aa11.41□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Scgb1b3J3QJY4 93 aa11.41□□□□□ -0.58
Scn1b-203ENSMUST00000211945 Defb29Q8BGW9 78 aa11.4□□□□□ -0.58
Scn1b-203ENSMUST00000211945 A0A286YCQ8 80 aa11.4□□□□□ -0.59
Scn1b-203ENSMUST00000211945 TeppQ6IMH0 216 aa11.4□□□□□ -0.59
Scn1b-203ENSMUST00000211945 RetnlbQ99P86 105 aa11.4□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Ube2aQ9Z255 152 aa11.4□□□□□ -0.59
Scn1b-203ENSMUST00000211945 E130218I03RikA0A0U1RNU5 63 aa11.39□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Gm10320E9PW43 113 aa11.39□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Igf1P05017 153 aa11.39□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Rpl32-psP17932 135 aa11.39□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Cox7cP17665 63 aa11.38□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Xlr5cQ9JJR2 179 aa11.38□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Igkv4-58A0A0G2JGI6 119 aa11.37□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Ccdc179J3QM76 67 aa11.37□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Defb39Q70KL3 74 aa11.37□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Ighv10-1A0A0B4J1J6 119 aa11.36□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Mrpl55Q9CZ83 127 aa11.36□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Gm20726G3UX18 150 aa11.35□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Igkv1-110A0A0B4J1I0 119 aa11.35□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Gm10139O88245 57 aa11.35□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Bud31Q6PGH1 103 aa11.35□□□□□ -0.59
Scn1b-203ENSMUST00000211945 A930002H24RikQ8C8Y3 163 aa11.35□□□□□ -0.59
Scn1b-203ENSMUST00000211945 Lrp1Q91ZX7 4545 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 44.7 ms