RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Gm42715A0A087WP63 3095 aaKnown RBP12.12□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Gm10770F7D043 238 aa12.11□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Prol1E9PYQ4 312 aa12.1□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Nbeal1E9PYP2 2688 aa12.1□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Fam168bQ80XQ8 194 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Gm10197F6QEY5 67 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 A930002H24RikQ8C8Y3 163 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Psors1c2Q80ZC9 134 aa12.09□□□□□ -0.47
Smarcc1-207ENSMUST00000199896 Gm3233E9Q2H5 230 aa12.08□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 AplnQ9R0R4 77 aa12.07□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Ighv2-2A0A075B5P8 116 aa12.07□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 P01821 116 aa12.07□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Rpl37aP61514 92 aa12.06□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Gm27235Q3UW50 83 aa12.06□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Krtap11-1E9Q2E9 183 aa12.05□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 AtrQ9JKK8 2635 aa12.04□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 Q8BT88 171 aa12.04□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 AI854703Q8BIN3 203 aa12.04□□□□□ -0.48
Smarcc1-207ENSMUST00000199896 PcntP48725 2898 aa12.02□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Usp24B1AY13 2617 aaKnown RBP12.01□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Spint4Q9D263 159 aa11.97□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Sprr4Q8CGN8 76 aa11.97□□□□□ -0.49
Smarcc1-207ENSMUST00000199896 Gm12216A0A1W2P827 62 aa11.95□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Defb1P56386 69 aa11.95□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 4930507D05RikQ8C9C9 103 aa11.95□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Lypd5Q9D7Z7 256 aa11.94□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Ep400Q8CHI8 3072 aaKnown RBP11.93□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Gm17689B3GLJ4 109 aa11.93□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Q8BGJ3 129 aa11.93□□□□□ -0.5
Smarcc1-207ENSMUST00000199896 Krtap16-1A2A5X5 502 aa11.87□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 CenpfE9Q3P4 2997 aaKnown RBP11.87□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 AY074887Q8R5F9 132 aa11.86□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 Gm10308Q9CVR5 141 aa11.84□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 Plac8Q9JI48 112 aa11.84□□□□□ -0.51
Smarcc1-207ENSMUST00000199896 A530084C06RikQ3UTW2 186 aa11.83□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Eif4ebp3Q80VV3 101 aa11.83□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Gm20661K7N787 53 aa11.82□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Limd2Q8BGB5 128 aa11.82□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 AW011738F6S7Q2 159 aa11.81□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Defb9Q8R2I6 67 aa11.8□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Sprr1bQ62267 153 aa11.8□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Fn1P11276 2477 aaKnown RBP11.79□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 Nsd1O88491 2588 aaKnown RBP11.78□□□□□ -0.52
Smarcc1-207ENSMUST00000199896 OxtP35454 125 aa11.77□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Anapc11Q9CPX9 84 aa11.76□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 FlnaQ8BTM8 2647 aaKnown RBP11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Prune2Q52KR3 3084 aa11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Gm7138L7N2C3 230 aa11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Gm3238W4VSP7 230 aa11.75□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 UtrnE9Q6R7 3430 aa11.74□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Dnah12Q3V0Q1 3086 aa11.74□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 C530025M09RikF6RGA8 229 aa11.73□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 TrioQ0KL02 3102 aa11.71□□□□□ -0.53
Smarcc1-207ENSMUST00000199896 Hectd1Q69ZR2 2618 aaKnown RBP11.7□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Gcn1E9PVA8 2671 aaKnown RBP11.7□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 7530416G11RikJ3QJX6 159 aa11.7□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Cypt15B1AXS0 87 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Coa5Q99M07 74 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Lelp1Q9DAE3 120 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Gm7137J3QMW1 236 aa11.69□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 A330070K13RikQ8CA53 115 aa11.66□□□□□ -0.54
Smarcc1-207ENSMUST00000199896 Rps28P62858 69 aaKnown RBP11.64□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Gm7276Q3TYW4 209 aa11.64□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Notch1Q01705 2531 aa11.61□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Cep350E9Q309 3095 aa11.61□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Phxr5P08399 672 aa11.58□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 CnbpP53996 178 aaKnown RBP11.58□□□□□ -0.55
Smarcc1-207ENSMUST00000199896 Rnase13Q5GAM7 153 aa11.58□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Akap13E9Q394 2776 aa11.57□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Jbts17Q8CE72 3214 aa11.57□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Gm11213A0A1B0GR83 88 aa11.56□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Cdc42se1Q8BHL7 80 aa11.56□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Mp68P56379 58 aa11.55□□□□□ -0.56
Smarcc1-207ENSMUST00000199896 Dmbt1Q60997 2085 aa11.51□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Zcchc13Q9D548 170 aa11.51□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Fam104aA2A6P4 185 aa11.51□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Prr13Q9CQJ5 137 aa11.5□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Gm26620Q9CY65 116 aa11.5□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Stab1Q8R4Y4 2571 aa11.5□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Mast4Q811L6 2618 aa11.48□□□□□ -0.57
Smarcc1-207ENSMUST00000199896 Phxr4P15974 95 aa11.46□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Itpr1P11881 2749 aa11.45□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Gm9195A0A140LHT4 2805 aa11.45□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 HrnrQ8VHD8 2496 aa11.45□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Smim29Q8R043 75 aa11.44□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Lama2Q60675 3118 aaKnown RBP11.43□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Uqcr11Q9CPX8 56 aa11.4□□□□□ -0.58
Smarcc1-207ENSMUST00000199896 Chtf8P0CG14 533 aa11.39□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Prrc2cQ3TLH4 2846 aaKnown RBP11.37□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Gm11565A2A4M7 156 aa11.37□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 NbdyA0A0N4SUI7 68 aa11.36□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Lama3Q61789 3330 aa11.35□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Cypt14J3QPF7 87 aa11.34□□□□□ -0.59
Smarcc1-207ENSMUST00000199896 Gm9821Q8K076 103 aa11.33□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 2310034C09RikQ9D746 214 aa11.33□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Gm10065F6TJM2 114 aa11.31□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Fam229bQ8CF36 80 aa11.31□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Kmt2bO08550 2713 aa11.3□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Usp34Q6ZQ93 3582 aa11.28□□□□□ -0.6
Smarcc1-207ENSMUST00000199896 Gm7173A0A0G2JEB6 3132 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms