RNA–Protein interactions for RNA: ENSMUST00000112251.8

Ubr3-202, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ubr3, Length 8,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-202ENSMUST00000112251 HrnrQ8VHD8 2496 aa11,24□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Zfyve26Q5DU37 2529 aa11,24□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Tln1P26039 2541 aaKnown RBP11,24□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Gm10837Q3UTT8 145 aa11,24□□□□□ -0,61
Ubr3-202ENSMUST00000112251 B430305J03RikQ8BQQ8 176 aa11,24□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Gm10308Q9CVR5 141 aa11,24□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Gm10643Q3URG9 111 aa11,23□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Q9DAB9 146 aa11,23□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Prr9Q8BV84 116 aa11,22□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Smr3aQ61900 147 aa11,22□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Prr13Q9CQJ5 137 aa11,21□□□□□ -0,61
Ubr3-202ENSMUST00000112251 3110070M22RikQ9DAQ7 118 aa11,21□□□□□ -0,61
Ubr3-202ENSMUST00000112251 Ttc28Q80XJ3 2450 aa11,2□□□□□ -0,62
Ubr3-202ENSMUST00000112251 Setd2E9Q5F9 2537 aa11,18□□□□□ -0,62
Ubr3-202ENSMUST00000112251 PcntP48725 2898 aa11,15□□□□□ -0,62
Ubr3-202ENSMUST00000112251 Ankhd1E9PUR0 2548 aaKnown RBP11,15□□□□□ -0,63
Ubr3-202ENSMUST00000112251 Gm21798J3QNU5 87 aa11,14□□□□□ -0,63
Ubr3-202ENSMUST00000112251 Epg5Q80TA9 2572 aa11,11□□□□□ -0,63
Ubr3-202ENSMUST00000112251 Gm9821Q8K076 103 aa11,09□□□□□ -0,63
Ubr3-202ENSMUST00000112251 Piezo2Q8CD54 2822 aa11,06□□□□□ -0,64
Ubr3-202ENSMUST00000112251 1810062G17RikG3X8Y2 129 aa11,06□□□□□ -0,64
Ubr3-202ENSMUST00000112251 Anapc11Q9CPX9 84 aa11,06□□□□□ -0,64
Ubr3-202ENSMUST00000112251 Cypt15B1AXS0 87 aa11,06□□□□□ -0,64
Ubr3-202ENSMUST00000112251 Gm9955Q8CEJ8 102 aa11,06□□□□□ -0,64
Ubr3-202ENSMUST00000112251 MtorQ9JLN9 2549 aa11,05□□□□□ -0,64
Ubr3-202ENSMUST00000112251 2310034C09RikQ9D746 214 aa11,05□□□□□ -0,64
Ubr3-202ENSMUST00000112251 Krtap11-1E9Q2E9 183 aa11□□□□□ -0,65
Ubr3-202ENSMUST00000112251 Camk2n1Q6QWF9 78 aa11□□□□□ -0,65
Ubr3-202ENSMUST00000112251 Piezo1E2JF22 2547 aa10,98□□□□□ -0,65
Ubr3-202ENSMUST00000112251 Chtf8P0CG14 533 aa10,98□□□□□ -0,65
Ubr3-202ENSMUST00000112251 Gm26620Q9CY65 116 aa10,97□□□□□ -0,65
Ubr3-202ENSMUST00000112251 Gm9573F7C950 1606 aa10,96□□□□□ -0,65
Ubr3-202ENSMUST00000112251 Defb9Q8R2I6 67 aa10,95□□□□□ -0,66
Ubr3-202ENSMUST00000112251 Gm7276Q3TYW4 209 aa10,95□□□□□ -0,66
Ubr3-202ENSMUST00000112251 Col4a2P08122 1707 aa10,94□□□□□ -0,66
Ubr3-202ENSMUST00000112251 Usp24B1AY13 2617 aaKnown RBP10,93□□□□□ -0,66
Ubr3-202ENSMUST00000112251 A330070K13RikQ8CA53 115 aa10,91□□□□□ -0,66
Ubr3-202ENSMUST00000112251 Gm10772F7AIG4 85 aa10,91□□□□□ -0,66
Ubr3-202ENSMUST00000112251 Gm11213A0A1B0GR83 88 aa10,9□□□□□ -0,66
Ubr3-202ENSMUST00000112251 Lypd5Q9D7Z7 256 aa10,9□□□□□ -0,67
Ubr3-202ENSMUST00000112251 Krtap24-1G3X9A2 248 aa10,89□□□□□ -0,67
Ubr3-202ENSMUST00000112251 Cep192E9Q4Y4 2514 aaKnown RBP10,89□□□□□ -0,67
Ubr3-202ENSMUST00000112251 Nbeal1E9PYP2 2688 aa10,86□□□□□ -0,67
Ubr3-202ENSMUST00000112251 Sprr4Q8CGN8 76 aa10,86□□□□□ -0,67
Ubr3-202ENSMUST00000112251 Spata3Q9D9T6 193 aa10,84□□□□□ -0,67
Ubr3-202ENSMUST00000112251 Gm4491E0CX42 125 aa10,8□□□□□ -0,68
Ubr3-202ENSMUST00000112251 Chd8Q09XV5 2582 aaKnown RBP10,79□□□□□ -0,68
Ubr3-202ENSMUST00000112251 Gm3250E9Q1M3 230 aa10,79□□□□□ -0,68
Ubr3-202ENSMUST00000112251 6030445D17RikE9Q8F9 148 aa10,77□□□□□ -0,68
Ubr3-202ENSMUST00000112251 AY074887Q8R5F9 132 aa10,76□□□□□ -0,69
Ubr3-202ENSMUST00000112251 Psors1c2Q80ZC9 134 aa10,74□□□□□ -0,69
Ubr3-202ENSMUST00000112251 Ankrd17Q99NH0 2603 aaKnown RBP10,74□□□□□ -0,69
Ubr3-202ENSMUST00000112251 AW011738F6S7Q2 159 aa10,73□□□□□ -0,69
Ubr3-202ENSMUST00000112251 Eif4ebp3Q80VV3 101 aa10,73□□□□□ -0,69
Ubr3-202ENSMUST00000112251 Sprr1bQ62267 153 aa10,72□□□□□ -0,69
Ubr3-202ENSMUST00000112251 Plac8Q9JI48 112 aa10,72□□□□□ -0,69
Ubr3-202ENSMUST00000112251 OxtP35454 125 aa10,71□□□□□ -0,7
Ubr3-202ENSMUST00000112251 Hectd1Q69ZR2 2618 aaKnown RBP10,68□□□□□ -0,7
Ubr3-202ENSMUST00000112251 Fam229bQ8CF36 80 aa10,67□□□□□ -0,7
Ubr3-202ENSMUST00000112251 Usp9xP70398 2559 aaKnown RBP10,65□□□□□ -0,7
Ubr3-202ENSMUST00000112251 Krtap15-1Q9QZU5 150 aa10,65□□□□□ -0,71
Ubr3-202ENSMUST00000112251 Usp9yF8VPU6 2556 aa10,65□□□□□ -0,71
Ubr3-202ENSMUST00000112251 Mki67E9PVX6 3177 aaKnown RBP10,63□□□□□ -0,71
Ubr3-202ENSMUST00000112251 C530025M09RikF6RGA8 229 aa10,63□□□□□ -0,71
Ubr3-202ENSMUST00000112251 Krtap26-1Q9D7N2 215 aa10,59□□□□□ -0,71
Ubr3-202ENSMUST00000112251 Fam229aB2KGE5 128 aa10,59□□□□□ -0,71
Ubr3-202ENSMUST00000112251 CnbpP53996 178 aaKnown RBP10,59□□□□□ -0,71
Ubr3-202ENSMUST00000112251 FasnP19096 2504 aaKnown RBP10,58□□□□□ -0,72
Ubr3-202ENSMUST00000112251 Notch1Q01705 2531 aa10,52□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Prrc2cQ3TLH4 2846 aaKnown RBP10,51□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Fam104aA2A6P4 185 aa10,51□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Romo1P60603 79 aa10,51□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Gm3285A0A1W2P7U0 201 aa10,49□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Gm42715A0A087WP63 3095 aaKnown RBP10,48□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Cypt14J3QPF7 87 aa10,47□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Dnah12Q3V0Q1 3086 aa10,47□□□□□ -0,73
Ubr3-202ENSMUST00000112251 Ankrd11E9Q4F7 2643 aa10,46□□□□□ -0,74
Ubr3-202ENSMUST00000112251 Fn1P11276 2477 aaKnown RBP10,43□□□□□ -0,74
Ubr3-202ENSMUST00000112251 TrrapQ80YV3 2565 aaKnown RBP10,43□□□□□ -0,74
Ubr3-202ENSMUST00000112251 Odf3bQ5M8M2 238 aa10,42□□□□□ -0,74
Ubr3-202ENSMUST00000112251 Zcchc13Q9D548 170 aa10,41□□□□□ -0,74
Ubr3-202ENSMUST00000112251 SetxA2AKX3 2646 aa10,4□□□□□ -0,74
Ubr3-202ENSMUST00000112251 Nsd1O88491 2588 aaKnown RBP10,39□□□□□ -0,75
Ubr3-202ENSMUST00000112251 Bod1lE9Q6J5 3032 aa10,38□□□□□ -0,75
Ubr3-202ENSMUST00000112251 Smim29Q8R043 75 aa10,37□□□□□ -0,75
Ubr3-202ENSMUST00000112251 Abca12E9Q876 2595 aa10,37□□□□□ -0,75
Ubr3-202ENSMUST00000112251 Gm10382Q3V0T5 144 aa10,35□□□□□ -0,75
Ubr3-202ENSMUST00000112251 Rpl37Q9D823 97 aa10,35□□□□□ -0,75
Ubr3-202ENSMUST00000112251 CicQ924A2 2510 aa10,35□□□□□ -0,75
Ubr3-202ENSMUST00000112251 Ranbp2Q9ERU9 3053 aaKnown RBP10,34□□□□□ -0,75
Ubr3-202ENSMUST00000112251 NbdyA0A0N4SUI7 68 aa10,33□□□□□ -0,76
Ubr3-202ENSMUST00000112251 Gm3646F6S692 53 aa10,31□□□□□ -0,76
Ubr3-202ENSMUST00000112251 Lama2Q60675 3118 aaKnown RBP10,3□□□□□ -0,76
Ubr3-202ENSMUST00000112251 Gm19426M0QWC7 77 aa10,29□□□□□ -0,76
Ubr3-202ENSMUST00000112251 BptfA2A654 3036 aaKnown RBP10,26□□□□□ -0,77
Ubr3-202ENSMUST00000112251 Sec61bQ9CQS8 96 aaKnown RBP10,24□□□□□ -0,77
Ubr3-202ENSMUST00000112251 Gm10320E9PW43 113 aa10,24□□□□□ -0,77
Ubr3-202ENSMUST00000112251 Gm3233E9Q2H5 230 aa10,23□□□□□ -0,77
Ubr3-202ENSMUST00000112251 Akap13E9Q394 2776 aa10,23□□□□□ -0,77
Ubr3-202ENSMUST00000112251 Gm37013Q8K491 104 aa10,23□□□□□ -0,77
Retrieved 100 of 22,080 RNA–protein pairs in 10,5 ms