RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Q9DAA7 145 aa5.69□□□□□ -1.5
Scn8a-204ENSMUST00000108909 BptfA2A654 3036 aaKnown RBP5.69□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Gm9925F6T2U3 160 aa5.68□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Gm10643Q3URG9 111 aa5.68□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Gm3443F7CCV5 94 aa5.68□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Pip4p1Q3TWL2 284 aa5.68□□□□□ -1.5
Scn8a-204ENSMUST00000108909 D730001G18RikA0A087WQU7 115 aa5.68□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Mrpl34Q99N91 92 aa5.68□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Lce6aD3YV94 81 aa5.67□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Nupr2Q497P3 102 aa5.67□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Gm17509Q9CZ61 145 aa5.67□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Wfdc17Q5SSJ1 76 aa5.66□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Nf1Q04690 2841 aa5.66□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Trank1Q8BV79 2999 aa5.66□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Cox6a2P43023 97 aa5.66□□□□□ -1.5
Scn8a-204ENSMUST00000108909 Znf575Q3TXZ1 239 aa5.66□□□□□ -1.5
Scn8a-204ENSMUST00000108909 1700018G05RikA0A1B0GSI2 66 aa5.65□□□□□ -1.5
Scn8a-204ENSMUST00000108909 FshbQ60687 130 aa5.64□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Ighv2-9A0A075B5Q5 116 aa5.64□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm17689B3GLJ4 109 aa5.64□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm21886J3QJU9 214 aa5.63□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Prr9Q8BV84 116 aa5.63□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Msrb1Q9JLC3 116 aa5.63□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm7173A0A0G2JEB6 3132 aa5.63□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Mp68P56379 58 aa5.63□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Ighv2-2A0A075B5P8 116 aa5.62□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm44790A0A0N4SV91 103 aa5.62□□□□□ -1.51
Scn8a-204ENSMUST00000108909 P01821 116 aa5.62□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Srrm2Q8BTI8 2703 aaKnown RBP5.62□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm10160F6Y577 67 aa5.62□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Celsr2Q9R0M0 2920 aa5.62□□□□□ -1.51
Scn8a-204ENSMUST00000108909 FcgbpE9Q0B5 2583 aa5.62□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Vps13aQ5H8C4 3166 aa5.61□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Igkv8-28A0A0G2JE47 121 aa5.61□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm5617Q91VN2 117 aa5.61□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Znf414Q9DCK4 299 aa5.61□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Cdc42se1Q8BHL7 80 aa5.61□□□□□ -1.51
Scn8a-204ENSMUST00000108909 FryE9Q8I9 3020 aa5.61□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm10770F7D043 238 aa5.6□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Eif4ebp3Q80VV3 101 aa5.6□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm10308Q9CVR5 141 aa5.6□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Col4a2P08122 1707 aa5.6□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Adm2Q7TNK8 150 aa5.59□□□□□ -1.51
Scn8a-204ENSMUST00000108909 A730009L09RikA0A1B0GS82 72 aa5.59□□□□□ -1.51
Scn8a-204ENSMUST00000108909 Gm9903Q8C9Y8 129 aa5.58□□□□□ -1.52
Scn8a-204ENSMUST00000108909 LrbaQ9ESE1 2856 aa5.58□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Ighv8-13A0A075B5Y0 101 aa5.58□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Gm12216A0A1W2P827 62 aa5.57□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Gm9767G3X930 207 aa5.57□□□□□ -1.52
Scn8a-204ENSMUST00000108909 CrygaP04345 174 aa5.57□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Pla2g2cP48076 150 aa5.57□□□□□ -1.52
Scn8a-204ENSMUST00000108909 AI606181Q8C7B9 129 aa5.57□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Limd2Q8BGB5 128 aa5.56□□□□□ -1.52
Scn8a-204ENSMUST00000108909 AtmQ62388 3066 aa5.56□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Mki67E9PVX6 3177 aaKnown RBP5.56□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Igkv8-19A0A0G2JFN8 121 aa5.56□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Gm26661M0QWV4 156 aa5.56□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Gm16485Q8C4B7 115 aa5.55□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Coa5Q99M07 74 aa5.55□□□□□ -1.52
Scn8a-204ENSMUST00000108909 MobpQ9D2P8 170 aa5.55□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Chd9Q8BYH8 2885 aa5.55□□□□□ -1.52
Scn8a-204ENSMUST00000108909 NbeaQ9EPN1 2936 aa5.55□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Chchd10Q7TNL9 138 aa5.54□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Gm28374F6SG70 93 aa5.54□□□□□ -1.52
Scn8a-204ENSMUST00000108909 1600014C23RikQ9DAX4 101 aa5.54□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Defb1P56386 69 aa5.54□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Gm20661K7N787 53 aa5.53□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Cfap54Q8C6S9 3106 aa5.53□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Myo15bI7HPW8 3033 aa5.53□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Bri3P28662 125 aa5.53□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Defb39Q70KL3 74 aa5.53□□□□□ -1.52
Scn8a-204ENSMUST00000108909 Gm10642Q3TWM1 71 aa5.52□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Frem2Q6NVD0 3160 aa5.52□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Rpl37aP61514 92 aa5.52□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Gm11213A0A1B0GR83 88 aa5.52□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Gm11627A6PWP4 55 aa5.52□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Elof1P60003 83 aa5.51□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Gm43218A0A0G2JGT0 114 aa5.51□□□□□ -1.53
Scn8a-204ENSMUST00000108909 A930002H24RikQ8C8Y3 163 aa5.5□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Phxr4P15974 95 aa5.5□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Dmac1Q9CQ00 111 aa5.5□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Tenm1Q9WTS4 2731 aa5.49□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Gm10999F6Q4M4 69 aa5.49□□□□□ -1.53
Scn8a-204ENSMUST00000108909 TgO08710 2766 aa5.48□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Fam229bQ8CF36 80 aa5.47□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Dmxl2Q8BPN8 3032 aa5.47□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Q8BT88 171 aa5.47□□□□□ -1.53
Scn8a-204ENSMUST00000108909 AplnQ9R0R4 77 aa5.47□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Phxr5P08399 672 aa5.47□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Pdzd2E9Q1M1 2796 aa5.46□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Defb50Q6TU36 73 aa5.46□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Lama1P19137 3084 aa5.46□□□□□ -1.53
Scn8a-204ENSMUST00000108909 Gm17606F6ZL36 78 aa5.46□□□□□ -1.54
Scn8a-204ENSMUST00000108909 Gm10772F7AIG4 85 aa5.46□□□□□ -1.54
Scn8a-204ENSMUST00000108909 Tenm3Q9WTS6 2715 aa5.46□□□□□ -1.54
Scn8a-204ENSMUST00000108909 Gm20538F6Z9R1 75 aa5.46□□□□□ -1.54
Scn8a-204ENSMUST00000108909 A330070K13RikQ8CA53 115 aa5.46□□□□□ -1.54
Scn8a-204ENSMUST00000108909 HttP42859 3119 aa5.45□□□□□ -1.54
Scn8a-204ENSMUST00000108909 Defb2P82020 71 aa5.45□□□□□ -1.54
Scn8a-204ENSMUST00000108909 1810062G17RikG3X8Y2 129 aa5.45□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 66.7 ms