RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Ankrd17Q99NH0 2603 aaKnown RBP7.65□□□□□ -1.18
Chd3-202ENSMUST00000108661 Fam168bQ80XQ8 194 aa7.64□□□□□ -1.19
Chd3-202ENSMUST00000108661 Q8BGJ3 129 aa7.63□□□□□ -1.19
Chd3-202ENSMUST00000108661 Crip3Q6Q6R3 243 aa7.63□□□□□ -1.19
Chd3-202ENSMUST00000108661 CicQ924A2 2510 aa7.62□□□□□ -1.19
Chd3-202ENSMUST00000108661 3110070M22RikQ9DAQ7 118 aa7.62□□□□□ -1.19
Chd3-202ENSMUST00000108661 Plac8Q9JI48 112 aa7.62□□□□□ -1.19
Chd3-202ENSMUST00000108661 Elof1P60003 83 aa7.61□□□□□ -1.19
Chd3-202ENSMUST00000108661 Psors1c2Q80ZC9 134 aa7.61□□□□□ -1.19
Chd3-202ENSMUST00000108661 Usp9yF8VPU6 2556 aa7.6□□□□□ -1.19
Chd3-202ENSMUST00000108661 Bahcc1Q3UHR0 2643 aa7.6□□□□□ -1.19
Chd3-202ENSMUST00000108661 Gm10772F7AIG4 85 aa7.6□□□□□ -1.19
Chd3-202ENSMUST00000108661 Gm7138L7N2C3 230 aa7.6□□□□□ -1.19
Chd3-202ENSMUST00000108661 Gm3238W4VSP7 230 aa7.6□□□□□ -1.19
Chd3-202ENSMUST00000108661 4930507D05RikQ8C9C9 103 aa7.59□□□□□ -1.19
Chd3-202ENSMUST00000108661 Krtap26-1Q9D7N2 215 aa7.59□□□□□ -1.19
Chd3-202ENSMUST00000108661 Krtap11-1E9Q2E9 183 aa7.58□□□□□ -1.2
Chd3-202ENSMUST00000108661 Setd2E9Q5F9 2537 aa7.58□□□□□ -1.2
Chd3-202ENSMUST00000108661 Pla2g10Q9QXX3 151 aa7.57□□□□□ -1.2
Chd3-202ENSMUST00000108661 MtorQ9JLN9 2549 aa7.55□□□□□ -1.2
Chd3-202ENSMUST00000108661 Defb9Q8R2I6 67 aa7.55□□□□□ -1.2
Chd3-202ENSMUST00000108661 Gm7137J3QMW1 236 aa7.55□□□□□ -1.2
Chd3-202ENSMUST00000108661 Cdc42se1Q8BHL7 80 aa7.55□□□□□ -1.2
Chd3-202ENSMUST00000108661 AI854703Q8BIN3 203 aa7.55□□□□□ -1.2
Chd3-202ENSMUST00000108661 Gm9821Q8K076 103 aa7.54□□□□□ -1.2
Chd3-202ENSMUST00000108661 Limd2Q8BGB5 128 aa7.53□□□□□ -1.2
Chd3-202ENSMUST00000108661 Gm10770F7D043 238 aa7.52□□□□□ -1.21
Chd3-202ENSMUST00000108661 Anapc11Q9CPX9 84 aa7.52□□□□□ -1.21
Chd3-202ENSMUST00000108661 Q8BT88 171 aa7.52□□□□□ -1.21
Chd3-202ENSMUST00000108661 Gm20538F6Z9R1 75 aa7.51□□□□□ -1.21
Chd3-202ENSMUST00000108661 Unc79Q0KK59 2596 aa7.51□□□□□ -1.21
Chd3-202ENSMUST00000108661 Sprr4Q8CGN8 76 aa7.5□□□□□ -1.21
Chd3-202ENSMUST00000108661 A330070K13RikQ8CA53 115 aa7.5□□□□□ -1.21
Chd3-202ENSMUST00000108661 Smr3aQ61900 147 aa7.5□□□□□ -1.21
Chd3-202ENSMUST00000108661 Abca12E9Q876 2595 aa7.49□□□□□ -1.21
Chd3-202ENSMUST00000108661 Coa5Q99M07 74 aa7.46□□□□□ -1.22
Chd3-202ENSMUST00000108661 Lypd5Q9D7Z7 256 aa7.46□□□□□ -1.22
Chd3-202ENSMUST00000108661 Prr13Q9CQJ5 137 aa7.45□□□□□ -1.22
Chd3-202ENSMUST00000108661 Krtap16-1A2A5X5 502 aa7.43□□□□□ -1.22
Chd3-202ENSMUST00000108661 Dmbt1Q60997 2085 aa7.43□□□□□ -1.22
Chd3-202ENSMUST00000108661 Sprr1bQ62267 153 aa7.41□□□□□ -1.22
Chd3-202ENSMUST00000108661 Cep192E9Q4Y4 2514 aaKnown RBP7.41□□□□□ -1.22
Chd3-202ENSMUST00000108661 Fam104aA2A6P4 185 aa7.4□□□□□ -1.22
Chd3-202ENSMUST00000108661 Gm17349F7BGH6 99 aa7.4□□□□□ -1.22
Chd3-202ENSMUST00000108661 Gm11565A2A4M7 156 aa7.39□□□□□ -1.23
Chd3-202ENSMUST00000108661 CnbpP53996 178 aaKnown RBP7.39□□□□□ -1.23
Chd3-202ENSMUST00000108661 Gm26620Q9CY65 116 aa7.38□□□□□ -1.23
Chd3-202ENSMUST00000108661 Lelp1Q9DAE3 120 aa7.38□□□□□ -1.23
Chd3-202ENSMUST00000108661 Rps28P62858 69 aaKnown RBP7.38□□□□□ -1.23
Chd3-202ENSMUST00000108661 Gm11213A0A1B0GR83 88 aa7.37□□□□□ -1.23
Chd3-202ENSMUST00000108661 Cypt15B1AXS0 87 aa7.37□□□□□ -1.23
Chd3-202ENSMUST00000108661 Gm42715A0A087WP63 3095 aaKnown RBP7.35□□□□□ -1.23
Chd3-202ENSMUST00000108661 FlnbQ80X90 2602 aaKnown RBP7.34□□□□□ -1.23
Chd3-202ENSMUST00000108661 Zfp292Q9Z2U2 2698 aa7.34□□□□□ -1.23
Chd3-202ENSMUST00000108661 CriptO70333 101 aa7.33□□□□□ -1.24
Chd3-202ENSMUST00000108661 UtrnE9Q6R7 3430 aa7.33□□□□□ -1.24
Chd3-202ENSMUST00000108661 Gm36176A0A1W2P8D5 158 aa7.32□□□□□ -1.24
Chd3-202ENSMUST00000108661 Spink7Q6IE32 76 aa7.32□□□□□ -1.24
Chd3-202ENSMUST00000108661 AY074887Q8R5F9 132 aa7.32□□□□□ -1.24
Chd3-202ENSMUST00000108661 Ankrd11E9Q4F7 2643 aa7.31□□□□□ -1.24
Chd3-202ENSMUST00000108661 Gm3880A0A1B0GSB3 72 aa7.31□□□□□ -1.24
Chd3-202ENSMUST00000108661 Jbts17Q8CE72 3214 aa7.31□□□□□ -1.24
Chd3-202ENSMUST00000108661 Gm10308Q9CVR5 141 aa7.3□□□□□ -1.24
Chd3-202ENSMUST00000108661 Usp24B1AY13 2617 aaKnown RBP7.3□□□□□ -1.24
Chd3-202ENSMUST00000108661 Zcchc13Q9D548 170 aa7.3□□□□□ -1.24
Chd3-202ENSMUST00000108661 NbdyA0A0N4SUI7 68 aa7.29□□□□□ -1.24
Chd3-202ENSMUST00000108661 AtrQ9JKK8 2635 aa7.28□□□□□ -1.24
Chd3-202ENSMUST00000108661 Golgb1E9PVZ8 3238 aa7.26□□□□□ -1.25
Chd3-202ENSMUST00000108661 Phxr4P15974 95 aa7.26□□□□□ -1.25
Chd3-202ENSMUST00000108661 Chtf8P0CG14 533 aa7.26□□□□□ -1.25
Chd3-202ENSMUST00000108661 C530025M09RikF6RGA8 229 aa7.25□□□□□ -1.25
Chd3-202ENSMUST00000108661 Gm10065F6TJM2 114 aa7.25□□□□□ -1.25
Chd3-202ENSMUST00000108661 Nbeal1E9PYP2 2688 aa7.25□□□□□ -1.25
Chd3-202ENSMUST00000108661 Eif4ebp3Q80VV3 101 aa7.25□□□□□ -1.25
Chd3-202ENSMUST00000108661 Gm7276Q3TYW4 209 aa7.24□□□□□ -1.25
Chd3-202ENSMUST00000108661 FasnP19096 2504 aaKnown RBP7.23□□□□□ -1.25
Chd3-202ENSMUST00000108661 Fam229aB2KGE5 128 aa7.22□□□□□ -1.25
Chd3-202ENSMUST00000108661 Nsd1O88491 2588 aaKnown RBP7.22□□□□□ -1.25
Chd3-202ENSMUST00000108661 Gm9508A0A1W2P7W0 230 aa7.22□□□□□ -1.25
Chd3-202ENSMUST00000108661 Myo18bE9PV66 2605 aa7.21□□□□□ -1.25
Chd3-202ENSMUST00000108661 Krtap15-1Q9QZU5 150 aa7.21□□□□□ -1.26
Chd3-202ENSMUST00000108661 Uqcr11Q9CPX8 56 aa7.2□□□□□ -1.26
Chd3-202ENSMUST00000108661 Cypt14J3QPF7 87 aa7.2□□□□□ -1.26
Chd3-202ENSMUST00000108661 Gm10320E9PW43 113 aa7.18□□□□□ -1.26
Chd3-202ENSMUST00000108661 Fam229bQ8CF36 80 aa7.16□□□□□ -1.26
Chd3-202ENSMUST00000108661 FlnaQ8BTM8 2647 aaKnown RBP7.15□□□□□ -1.26
Chd3-202ENSMUST00000108661 Sec61bQ9CQS8 96 aaKnown RBP7.15□□□□□ -1.27
Chd3-202ENSMUST00000108661 Gm21798J3QNU5 87 aa7.15□□□□□ -1.27
Chd3-202ENSMUST00000108661 Dnah12Q3V0Q1 3086 aa7.14□□□□□ -1.27
Chd3-202ENSMUST00000108661 2310034C09RikQ9D746 214 aa7.14□□□□□ -1.27
Chd3-202ENSMUST00000108661 Akap13E9Q394 2776 aa7.13□□□□□ -1.27
Chd3-202ENSMUST00000108661 Hectd1Q69ZR2 2618 aaKnown RBP7.13□□□□□ -1.27
Chd3-202ENSMUST00000108661 Gm9195A0A140LHT4 2805 aa7.12□□□□□ -1.27
Chd3-202ENSMUST00000108661 Ep400Q8CHI8 3072 aaKnown RBP7.11□□□□□ -1.27
Chd3-202ENSMUST00000108661 Prune2Q52KR3 3084 aa7.11□□□□□ -1.27
Chd3-202ENSMUST00000108661 CenpfE9Q3P4 2997 aaKnown RBP7.11□□□□□ -1.27
Chd3-202ENSMUST00000108661 Smim29Q8R043 75 aa7.08□□□□□ -1.28
Chd3-202ENSMUST00000108661 Gm4491E0CX42 125 aa7.07□□□□□ -1.28
Chd3-202ENSMUST00000108661 Gm10643Q3URG9 111 aa7.05□□□□□ -1.28
Chd3-202ENSMUST00000108661 TrioQ0KL02 3102 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms