RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 A730071L15RikQ8C4X0 137 aa8.6□□□□□ -1.03
Nup88-203ENSMUST00000108531 Igkv1-88A0A140T8N1 120 aa8.6□□□□□ -1.03
Nup88-203ENSMUST00000108531 Ndufc1Q9CQY9 76 aa8.59□□□□□ -1.03
Nup88-203ENSMUST00000108531 Ighv2-2A0A075B5P8 116 aa8.59□□□□□ -1.03
Nup88-203ENSMUST00000108531 P01821 116 aa8.59□□□□□ -1.03
Nup88-203ENSMUST00000108531 Igkv1-110A0A0B4J1I0 119 aa8.58□□□□□ -1.04
Nup88-203ENSMUST00000108531 Cdk2ap2Q9CPY4 127 aa8.58□□□□□ -1.04
Nup88-203ENSMUST00000108531 Gm17689B3GLJ4 109 aa8.58□□□□□ -1.04
Nup88-203ENSMUST00000108531 Cd164Q9R0L9 197 aa8.58□□□□□ -1.04
Nup88-203ENSMUST00000108531 B230307C23RikQ8BLB2 64 aa8.57□□□□□ -1.04
Nup88-203ENSMUST00000108531 Tex15F8VPN2 2785 aa8.57□□□□□ -1.04
Nup88-203ENSMUST00000108531 CicQ924A2 2510 aa8.56□□□□□ -1.04
Nup88-203ENSMUST00000108531 Trav14-1A0A0G2JF94 121 aa8.56□□□□□ -1.04
Nup88-203ENSMUST00000108531 Camk2n2Q78WH7 79 aa8.56□□□□□ -1.04
Nup88-203ENSMUST00000108531 A830005F24RikQ8BRT5 167 aa8.56□□□□□ -1.04
Nup88-203ENSMUST00000108531 Samd13D3YUG0 102 aa8.56□□□□□ -1.04
Nup88-203ENSMUST00000108531 Reg3bP35230 175 aa8.56□□□□□ -1.04
Nup88-203ENSMUST00000108531 Smlr1J3QMJ4 66 aa8.55□□□□□ -1.04
Nup88-203ENSMUST00000108531 Defb37Q7TMD2 62 aa8.55□□□□□ -1.04
Nup88-203ENSMUST00000108531 Sprr4Q8CGN8 76 aa8.55□□□□□ -1.04
Nup88-203ENSMUST00000108531 Igkv8-28A0A0G2JE47 121 aa8.54□□□□□ -1.04
Nup88-203ENSMUST00000108531 Gm7276Q3TYW4 209 aa8.54□□□□□ -1.04
Nup88-203ENSMUST00000108531 Fam19a3Q7TPG6 132 aa8.54□□□□□ -1.04
Nup88-203ENSMUST00000108531 Nbeal2Q6ZQA0 2742 aa8.54□□□□□ -1.04
Nup88-203ENSMUST00000108531 PolqQ8CGS6 2544 aa8.52□□□□□ -1.05
Nup88-203ENSMUST00000108531 Phxr5P08399 672 aa8.51□□□□□ -1.05
Nup88-203ENSMUST00000108531 Pou2af1Q64693 256 aa8.51□□□□□ -1.05
Nup88-203ENSMUST00000108531 BikO70337 150 aa8.51□□□□□ -1.05
Nup88-203ENSMUST00000108531 Vpreb2P13373 142 aa8.51□□□□□ -1.05
Nup88-203ENSMUST00000108531 Gm5617Q91VN2 117 aa8.5□□□□□ -1.05
Nup88-203ENSMUST00000108531 Tenm4Q3UHK6 2771 aa8.5□□□□□ -1.05
Nup88-203ENSMUST00000108531 Igkv1-122A0A140T8M9 119 aa8.49□□□□□ -1.05
Nup88-203ENSMUST00000108531 Fbn1Q61554 2873 aaKnown RBP8.49□□□□□ -1.05
Nup88-203ENSMUST00000108531 Sfta2E9PXB6 77 aa8.47□□□□□ -1.05
Nup88-203ENSMUST00000108531 Smim29Q8R043 75 aa8.47□□□□□ -1.05
Nup88-203ENSMUST00000108531 Tenm1Q9WTS4 2731 aa8.47□□□□□ -1.05
Nup88-203ENSMUST00000108531 AplnQ9R0R4 77 aa8.46□□□□□ -1.05
Nup88-203ENSMUST00000108531 Sprr2jO70561 109 aa8.45□□□□□ -1.06
Nup88-203ENSMUST00000108531 A330070K13RikQ8CA53 115 aa8.45□□□□□ -1.06
Nup88-203ENSMUST00000108531 Fam19a5Q91WE9 132 aa8.44□□□□□ -1.06
Nup88-203ENSMUST00000108531 Brk1Q91VR8 75 aa8.44□□□□□ -1.06
Nup88-203ENSMUST00000108531 A0A286YE02 88 aa8.43□□□□□ -1.06
Nup88-203ENSMUST00000108531 H2al1aQ5M8Q2 105 aa8.43□□□□□ -1.06
Nup88-203ENSMUST00000108531 SnurfQ9WU12 71 aa8.43□□□□□ -1.06
Nup88-203ENSMUST00000108531 Notch2O35516 2470 aa8.42□□□□□ -1.06
Nup88-203ENSMUST00000108531 Igkv3-2A0A075B5P0 119 aa8.41□□□□□ -1.06
Nup88-203ENSMUST00000108531 Gm16181B0V2H2 73 aa8.41□□□□□ -1.06
Nup88-203ENSMUST00000108531 P06320 134 aa8.41□□□□□ -1.06
Nup88-203ENSMUST00000108531 Cox6a2P43023 97 aa8.41□□□□□ -1.06
Nup88-203ENSMUST00000108531 Serp1Q9Z1W5 66 aa8.41□□□□□ -1.06
Nup88-203ENSMUST00000108531 Gm11011D3Z3L9 86 aa8.4□□□□□ -1.06
Nup88-203ENSMUST00000108531 ApcQ61315 2845 aa8.4□□□□□ -1.07
Nup88-203ENSMUST00000108531 Dmac1Q9CQ00 111 aa8.4□□□□□ -1.07
Nup88-203ENSMUST00000108531 Gm11627A6PWP4 55 aa8.39□□□□□ -1.07
Nup88-203ENSMUST00000108531 P84750 121 aa8.39□□□□□ -1.07
Nup88-203ENSMUST00000108531 Pet100P0DJE0 76 aa8.38□□□□□ -1.07
Nup88-203ENSMUST00000108531 Gm7138L7N2C3 230 aa8.38□□□□□ -1.07
Nup88-203ENSMUST00000108531 Gm16485Q8C4B7 115 aa8.38□□□□□ -1.07
Nup88-203ENSMUST00000108531 Prr15lQ8JZM2 100 aa8.38□□□□□ -1.07
Nup88-203ENSMUST00000108531 Gm3238W4VSP7 230 aa8.38□□□□□ -1.07
Nup88-203ENSMUST00000108531 AtrQ9JKK8 2635 aa8.37□□□□□ -1.07
Nup88-203ENSMUST00000108531 6430550D23RikE9Q1X6 194 aa8.37□□□□□ -1.07
Nup88-203ENSMUST00000108531 Sprr1aQ62266 144 aa8.37□□□□□ -1.07
Nup88-203ENSMUST00000108531 Itpr2Q9Z329 2701 aa8.37□□□□□ -1.07
Nup88-203ENSMUST00000108531 A930002H24RikQ8C8Y3 163 aa8.37□□□□□ -1.07
Nup88-203ENSMUST00000108531 Gm37389A0A0A6YW05 95 aa8.36□□□□□ -1.07
Nup88-203ENSMUST00000108531 Wfdc6bF6ULY1 148 aa8.36□□□□□ -1.07
Nup88-203ENSMUST00000108531 Q8BT88 171 aa8.36□□□□□ -1.07
Nup88-203ENSMUST00000108531 UqcrqQ9CQ69 82 aa8.36□□□□□ -1.07
Nup88-203ENSMUST00000108531 Defa27F2Z403 93 aa8.35□□□□□ -1.07
Nup88-203ENSMUST00000108531 Fam168bQ80XQ8 194 aa8.35□□□□□ -1.07
Nup88-203ENSMUST00000108531 C130032M10RikQ8C888 123 aa8.35□□□□□ -1.07
Nup88-203ENSMUST00000108531 Gm10401E9Q3K6 71 aa8.34□□□□□ -1.08
Nup88-203ENSMUST00000108531 Vpreb1P13372 142 aa8.34□□□□□ -1.08
Nup88-203ENSMUST00000108531 Prol1E9PYQ4 312 aa8.33□□□□□ -1.08
Nup88-203ENSMUST00000108531 Kmt2aP55200 3966 aa8.33□□□□□ -1.08
Nup88-203ENSMUST00000108531 Obox2E9PXV9 151 aa8.32□□□□□ -1.08
Nup88-203ENSMUST00000108531 Mrpl34Q99N91 92 aa8.32□□□□□ -1.08
Nup88-203ENSMUST00000108531 PscaP57096 123 aa8.32□□□□□ -1.08
Nup88-203ENSMUST00000108531 Vpreb3D3Z6J4 130 aa8.31□□□□□ -1.08
Nup88-203ENSMUST00000108531 BaalcQ8VHV1 145 aa8.31□□□□□ -1.08
Nup88-203ENSMUST00000108531 Igkv3-4A0A140T8Q4 119 aa8.3□□□□□ -1.08
Nup88-203ENSMUST00000108531 Gm10570F6VB42 170 aa8.3□□□□□ -1.08
Nup88-203ENSMUST00000108531 PtprqP0C5E4 2300 aa8.3□□□□□ -1.08
Nup88-203ENSMUST00000108531 Gm37013Q8K491 104 aa8.29□□□□□ -1.08
Nup88-203ENSMUST00000108531 Gm44790A0A0N4SV91 103 aa8.29□□□□□ -1.08
Nup88-203ENSMUST00000108531 Igkv3-12A0A140T8P0 119 aa8.28□□□□□ -1.08
Nup88-203ENSMUST00000108531 Gm12353A2AGJ4 60 aa8.28□□□□□ -1.08
Nup88-203ENSMUST00000108531 Notch1Q01705 2531 aa8.28□□□□□ -1.08
Nup88-203ENSMUST00000108531 Dnah3Q8BW94 4083 aa8.28□□□□□ -1.08
Nup88-203ENSMUST00000108531 Gm17521F6QAC8 156 aa8.28□□□□□ -1.08
Nup88-203ENSMUST00000108531 Spink8Q09TK9 105 aa8.28□□□□□ -1.08
Nup88-203ENSMUST00000108531 Igkv8-19A0A0G2JFN8 121 aa8.27□□□□□ -1.09
Nup88-203ENSMUST00000108531 Ube2bP63147 152 aa8.27□□□□□ -1.09
Nup88-203ENSMUST00000108531 Dph3Q8K0W9 82 aa8.27□□□□□ -1.09
Nup88-203ENSMUST00000108531 Stab1Q8R4Y4 2571 aa8.26□□□□□ -1.09
Nup88-203ENSMUST00000108531 Defb40Q70KL2 73 aa8.26□□□□□ -1.09
Nup88-203ENSMUST00000108531 U90926O08546 118 aa8.25□□□□□ -1.09
Nup88-203ENSMUST00000108531 A530084C06RikQ3UTW2 186 aa8.25□□□□□ -1.09
Nup88-203ENSMUST00000108531 Sslp1Q3UN54 99 aa8.24□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 8.3 ms