RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Rpl18aP62717 176 aaKnown RBP14.77□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Gm9805F6YK59 57 aa14.76□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Defa16P50714 93 aa14.76□□□□□ -0.05
Scn1b-201ENSMUST00000098548 4930524J08RikQ9CUJ5 163 aa14.76□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Plac8Q9JI48 112 aa14.76□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Spata45Q9CVW4 97 aa14.74□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Ighv10-1A0A0B4J1J6 119 aa14.73□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Trav13n-2A0A0G2JF93 110 aa14.73□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Gm10767Q3TQP0 103 aa14.73□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Sprr1aQ62266 144 aa14.73□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Trav3-1Q5R1I8 114 aa14.72□□□□□ -0.05
Scn1b-201ENSMUST00000098548 PkigO70139 76 aa14.71□□□□□ -0.05
Scn1b-201ENSMUST00000098548 4930519P11RikQ9CUJ8 166 aa14.71□□□□□ -0.05
Scn1b-201ENSMUST00000098548 Gm10770F7D043 238 aa14.7□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Pkd1O08852 4293 aa14.7□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Igkv1-35A0A0G2JDE5 120 aa14.69□□□□□ -0.06
Scn1b-201ENSMUST00000098548 BaalcQ8VHV1 145 aa14.69□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Lyrm7Q9DA03 104 aa14.69□□□□□ -0.06
Scn1b-201ENSMUST00000098548 A0A286YCN5 57 aa14.68□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Defb40Q70KL2 73 aa14.68□□□□□ -0.06
Scn1b-201ENSMUST00000098548 PscaP57096 123 aa14.68□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Rpl39lQ9CQD0 51 aa14.68□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Gm28374F6SG70 93 aa14.65□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Sigmar1O55242 223 aa14.65□□□□□ -0.06
Scn1b-201ENSMUST00000098548 Igkv1-88A0A140T8N1 120 aa14.64□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Gm2696A0A1W2P709 240 aa14.64□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Igkv3-2A0A075B5P0 119 aa14.63□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Defa20Q45VN2 95 aa14.63□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Klk12B2RVZ0 247 aa14.62□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Prol1E9PYQ4 312 aa14.62□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Wfdc6bF6ULY1 148 aa14.62□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Pou2af1Q64693 256 aa14.61□□□□□ -0.07
Scn1b-201ENSMUST00000098548 TeppQ6IMH0 216 aa14.61□□□□□ -0.07
Scn1b-201ENSMUST00000098548 5730596B20RikQ8BQ08 205 aa14.6□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Obox2E9PXV9 151 aa14.6□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Xcl1P47993 114 aa14.6□□□□□ -0.07
Scn1b-201ENSMUST00000098548 2310034G01RikA0A286YDL3 209 aa14.59□□□□□ -0.07
Scn1b-201ENSMUST00000098548 Gm7276Q3TYW4 209 aa14.58□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Ntn5Q3UQ22 452 aa14.58□□□□□ -0.08
Scn1b-201ENSMUST00000098548 BB014433Q8C5R5 389 aa14.58□□□□□ -0.08
Scn1b-201ENSMUST00000098548 LbhQ9CX60 105 aa14.58□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Elof1P60003 83 aa14.56□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Dmac1Q9CQ00 111 aa14.56□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Gm10837Q3UTT8 145 aa14.56□□□□□ -0.08
Scn1b-201ENSMUST00000098548 E130218I03RikA0A0U1RNU5 63 aa14.55□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Cby1Q9D1C2 127 aa14.55□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Dnah5Q8VHE6 4621 aa14.54□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Dync1h1Q9JHU4 4644 aaKnown RBP14.53□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Igkv4-58A0A0G2JGI6 119 aa14.52□□□□□ -0.08
Scn1b-201ENSMUST00000098548 SycnQ8VCK7 134 aa14.52□□□□□ -0.08
Scn1b-201ENSMUST00000098548 Fam19a1Q7TPG8 133 aa14.5□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Cdip1Q9DB75 208 aa14.5□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Cd164Q9R0L9 197 aa14.5□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Stard9Q80TF6 4561 aa14.5□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Znf414Q9DCK4 299 aa14.49□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Msrb1Q9JLC3 116 aa14.47□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Igkv8-26A0A075B5N5 123 aa14.46□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Ighv10-3A0A075B5T6 119 aa14.46□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Inafm2A0A1L1STD6 152 aa14.46□□□□□ -0.09
Scn1b-201ENSMUST00000098548 P84750 121 aa14.46□□□□□ -0.09
Scn1b-201ENSMUST00000098548 Igkv2-109A0A075B5K6 120 aa14.45□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Gm7102J3QQ10 178 aa14.45□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Ifitm6A0A1B0GS75 124 aa14.44□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Zcchc13Q9D548 170 aa14.44□□□□□ -0.1
Scn1b-201ENSMUST00000098548 1700012A03RikQ9DAF1 130 aa14.44□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Ryr1E9PZQ0 5035 aa14.44□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Gm10320E9PW43 113 aa14.43□□□□□ -0.1
Scn1b-201ENSMUST00000098548 BatfO35284 125 aa14.43□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Fam19a5Q91WE9 132 aa14.43□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Q9DAA7 145 aa14.41□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Gm11011D3Z3L9 86 aa14.4□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Lamtor3O88653 124 aa14.4□□□□□ -0.1
Scn1b-201ENSMUST00000098548 9530003J23RikQ8BM26 151 aa14.4□□□□□ -0.1
Scn1b-201ENSMUST00000098548 Fam168bQ80XQ8 194 aa14.39□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Pde6gP09174 87 aa14.39□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Trav14d-3-dv8A0A075B619 120 aa14.38□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Tmem213Q08EA8 116 aa14.38□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Krtap13O88375 197 aa14.37□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Defa4P28311 92 aa14.37□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Fat1A0A1L1SQU7 4645 aa14.36□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Pkhd1E9PZ36 4059 aa14.34□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Fam104aA2A6P4 185 aa14.34□□□□□ -0.11
Scn1b-201ENSMUST00000098548 Sfta2E9PXB6 77 aa14.32□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Gm10065F6TJM2 114 aa14.32□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Tmem243B2RVB9 118 aa14.31□□□□□ -0.12
Scn1b-201ENSMUST00000098548 SacsQ9JLC8 4582 aa14.3□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Igkv1-122A0A140T8M9 119 aa14.3□□□□□ -0.12
Scn1b-201ENSMUST00000098548 A930002H24RikQ8C8Y3 163 aa14.3□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Q8K1L6 76 aa14.3□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Ighv2-2A0A075B5P8 116 aa14.29□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Ighv2-5A0A0A6YY69 116 aa14.29□□□□□ -0.12
Scn1b-201ENSMUST00000098548 P01821 116 aa14.29□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Smim29Q8R043 75 aa14.29□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Ormdl1Q921I0 153 aa14.28□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Rbm3O89086 153 aaKnown RBP14.27□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Wfdc10Q3V2J9 124 aa14.27□□□□□ -0.12
Scn1b-201ENSMUST00000098548 Defa23Q5G866 93 aa14.26□□□□□ -0.13
Scn1b-201ENSMUST00000098548 Igkv8-27A0A0G2JF28 120 aa14.26□□□□□ -0.13
Scn1b-201ENSMUST00000098548 Igkv8-30A0A140T8M3 121 aa14.26□□□□□ -0.13
Scn1b-201ENSMUST00000098548 Atp5eP56382 52 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 107.6 ms