RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Trav4-3A0A0B4J1K1 110 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Igkv8-24A0A140T8P5 121 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Hsbp1l1B2RXB2 72 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 AponG3X9D6 251 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Cks1bP61025 79 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Isg15Q64339 161 aaKnown RBP4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Hist2h2beQ64524 126 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gm10295Q8CCF3 114 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Ssbp1Q9CYR0 152 aaKnown RBP4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Cox7b2Q9D2H1 82 aa4.7□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gm44965A0A0N4SVR3 59 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 A730009L09RikA0A1B0GS82 72 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Cox8cA6H666 72 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 C530025M09RikF6RGA8 229 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Lect2O88803 151 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 P01755 137 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 P01819 144 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Rmi2Q3UPE3 149 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Sprr1aQ62266 144 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Sprr4Q8CGN8 76 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Ube2wQ8VDW4 151 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gm11559Q9D3H7 191 aa4.69□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Krtap3-1A2A591 98 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Smim1P0C8K7 78 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Defa9P50707 93 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Krtap1-4Q3V2D6 188 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Hrct1Q9D6B9 109 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Triap1Q9D8Z2 76 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Morn5Q9DAI9 170 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Erg28Q9ERY9 140 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Dpm2Q9Z324 84 aa4.68□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gm35549A0A0N4SUS7 141 aa4.67□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gm45753A0A1C7CYU8 86 aa4.67□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Mzt1Q8BUR9 78 aa4.67□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Trav9d-4A0A0G2JG37 103 aa4.66□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Ccl17F6R5P4 103 aa4.66□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Tcl1b5P56845 121 aa4.66□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Defb45Q3V490 66 aa4.66□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Camk2n2Q78WH7 79 aa4.66□□□□□ -1.66
Scn8a-202ENSMUST00000096198 B930094E09RikQ8C4T2 136 aa4.66□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Krtap19-1Q925H2 87 aa4.66□□□□□ -1.66
Scn8a-202ENSMUST00000096198 Gm29289A0A087WPY7 166 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Trav14-1A0A0G2JF94 121 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 1700011M02RikB1AX35 88 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gm6812B1AXU1 112 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gm17577J3QNF7 156 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gm26727M0QWT1 121 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Vamp8O70404 101 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Prm2P07978 107 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 4930544G11RikQ9CR99 193 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 1700010B08RikQ9DAI7 102 aa4.65□□□□□ -1.67
Scn8a-202ENSMUST00000096198 HrnrQ8VHD8 2496 aa4.64□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Igkv3-2A0A075B5P0 119 aa4.64□□□□□ -1.67
Scn8a-202ENSMUST00000096198 C920008G01RikA0A0B4J1N1 112 aa4.64□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Plscr4P58196 326 aa4.64□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Krtap16-3Q8C1I6 86 aa4.64□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Timm17bQ9Z0V7 172 aa4.64□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Trav4d-3A0A075B625 110 aa4.63□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gm11627A6PWP4 55 aa4.63□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Hbb-b2P02089 147 aa4.63□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Tal2Q62282 108 aa4.63□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Uqcc3Q8K2T4 89 aa4.63□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Sostdc1Q9CQN4 206 aa4.63□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Igkv8-16A0A0G2JDG9 121 aa4.62□□□□□ -1.67
Scn8a-202ENSMUST00000096198 A0A286YCN5 57 aa4.62□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Mc5rP41149 325 aa4.62□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Defb9Q8R2I6 67 aa4.62□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Wfdc12Q9JHY3 85 aa4.62□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Trav13-2A0A075B649 110 aa4.61□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gm28269A0A087WSG3 125 aa4.61□□□□□ -1.67
Scn8a-202ENSMUST00000096198 MifP34884 115 aaKnown RBP4.61□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gm10577Q3UDV9 132 aa4.61□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Pou2af1Q64693 256 aa4.61□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Bud31Q6PGH1 103 aa4.61□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Glrp1E9Q9S8 174 aa4.6□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gm11020F6ZGD5 61 aa4.6□□□□□ -1.67
Scn8a-202ENSMUST00000096198 PkigO70139 76 aa4.6□□□□□ -1.67
Scn8a-202ENSMUST00000096198 SycnQ8VCK7 134 aa4.6□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Pfn2Q9JJV2 140 aa4.6□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Ube2d4D3YUH6 135 aa4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 BC107364E9Q5A2 140 aa4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 S100a8P27005 89 aa4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Tcl1b3P56842 122 aa4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Cops9Q3U898 57 aa4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Rpl24Q8BP67 157 aaKnown RBP4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Gemin7Q9CWY4 129 aa4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 Reg3dQ9QUS9 175 aa4.59□□□□□ -1.67
Scn8a-202ENSMUST00000096198 NbdyA0A0N4SUI7 68 aa4.58□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Gm10845Q3UNY9 185 aa4.58□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Wfdc6bF6ULY1 148 aa4.57□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Cox7bP56393 80 aa4.57□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Try10Q792Z1 246 aaKnown RBP4.57□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Fam168bQ80XQ8 194 aa4.57□□□□□ -1.68
Scn8a-202ENSMUST00000096198 4930415O20RikQ8CDT5 131 aa4.57□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Zcchc13Q9D548 170 aa4.57□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Wdr38Q9D994 303 aa4.57□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Igkv8-18A0A0B4J1J3 123 aa4.56□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Smim13E9Q942 88 aa4.56□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Lst1O08843 95 aa4.56□□□□□ -1.68
Scn8a-202ENSMUST00000096198 Sprr2kO70562 68 aa4.56□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 65.6 ms