RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Igkv1-122A0A140T8M9 119 aa6.35□□□□□ -1.39
Hmgb1-201ENSMUST00000085546 Gm20661K7N787 53 aa6.34□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Myo15bI7HPW8 3033 aa6.34□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Prpf8Q99PV0 2335 aaKnown RBP6.33□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Vpreb3D3Z6J4 130 aa6.33□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Svep1A2AVA0 3567 aa6.32□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 PrlhG3UWC3 86 aa6.32□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Gm17577J3QNF7 156 aa6.32□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Prh1P05142 261 aa6.32□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Ankhd1E9PUR0 2548 aaKnown RBP6.32□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Gm12353A2AGJ4 60 aa6.31□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Defb40Q70KL2 73 aa6.31□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Ndufs5Q99LY9 106 aa6.31□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Cdk2ap2Q9CPY4 127 aa6.31□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Wfdc13Q5DQQ6 81 aa6.31□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Igkv3-9A0A140T8P4 119 aa6.29□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Zcchc13Q9D548 170 aa6.29□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Gm7257D3YX25 99 aa6.29□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Sptan1P16546 2472 aaKnown RBP6.29□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 AcacaQ5SWU9 2345 aa6.28□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Pla2g1bQ9Z0Y2 146 aa6.28□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Limd2Q8BGB5 128 aa6.28□□□□□ -1.4
Hmgb1-201ENSMUST00000085546 Chchd10Q7TNL9 138 aa6.27□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Obox2E9PXV9 151 aa6.27□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Ash1lQ99MY8 2958 aa6.26□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Gm21886J3QJU9 214 aa6.26□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Pla2g2cP48076 150 aa6.26□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 PscaP57096 123 aa6.25□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Q8BGJ3 129 aa6.24□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Wnk1P83741 2377 aa6.24□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Gm20538F6Z9R1 75 aa6.24□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Reg3aO09037 175 aa6.24□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 PrcdQ00LT2 53 aa6.23□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Uqcr11Q9CPX8 56 aa6.23□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 SetxA2AKX3 2646 aa6.23□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Gm11565A2A4M7 156 aa6.22□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 Prol1E9PYQ4 312 aa6.21□□□□□ -1.41
Hmgb1-201ENSMUST00000085546 OtoglF7A4A7 2325 aa6.2□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Cep192E9Q4Y4 2514 aaKnown RBP6.2□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 A730009L09RikA0A1B0GS82 72 aa6.2□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Erdr1J3QMM0 206 aa6.2□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 1700012A03RikQ9DAF1 130 aa6.19□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Gm2310J3QNJ2 377 aa6.19□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 C2cd3Q52KB6 2323 aa6.19□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Gm8439G3UWA7 96 aa6.18□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Ubr5Q80TP3 2792 aa6.18□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 1700018G05RikA0A1B0GSI2 66 aa6.17□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Piezo1E2JF22 2547 aa6.17□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Gm10267M0QWD8 85 aa6.17□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Dmac1Q9CQ00 111 aa6.16□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Spata3Q9D9T6 193 aa6.16□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Tln1P26039 2541 aaKnown RBP6.15□□□□□ -1.42
Hmgb1-201ENSMUST00000085546 Bdp1Q571C7 2467 aa6.15□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Camk2n2Q78WH7 79 aa6.15□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Pla2g10Q9QXX3 151 aa6.14□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Rpl37aP61514 92 aa6.14□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Sprr4Q8CGN8 76 aa6.13□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Cspg4Q8VHY0 2327 aa6.13□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Igkv3-5A0A140T8M6 119 aa6.12□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Rnase1P00683 149 aa6.12□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Mp68P56379 58 aa6.11□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Fbn2Q61555 2907 aa6.1□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 P84750 121 aa6.1□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Defb33Q30KN3 62 aa6.1□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Odf3bQ5M8M2 238 aa6.1□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Hivep2Q3UHF7 2430 aa6.09□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Gm28230A0A0A0MQ91 144 aa6.09□□□□□ -1.43
Hmgb1-201ENSMUST00000085546 Csmd2V9GX34 3611 aa6.08□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Gcn1E9PVA8 2671 aaKnown RBP6.07□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Znf706Q9D115 76 aaKnown RBP6.06□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Defb38Q7TNV7 63 aa6.05□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Igfn1Q3KNY0 2849 aa6.04□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Lelp1Q9DAE3 120 aa6.04□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 TgO08710 2766 aa6.04□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 CenpeQ6RT24 2474 aaKnown RBP6.04□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 6030445D17RikE9Q8F9 148 aa6.03□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Xirp2Q4U4S6 3784 aa6.03□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Ighv8-13A0A075B5Y0 101 aa6.03□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Celsr2Q9R0M0 2920 aa6.03□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Ankrd17Q99NH0 2603 aaKnown RBP6.03□□□□□ -1.44
Hmgb1-201ENSMUST00000085546 Akap13E9Q394 2776 aa6.02□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Cmc4Q61908 68 aa6.02□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Lrrk2Q5S006 2527 aa6.02□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Wfdc6bF6ULY1 148 aa6□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Hivep3A2A884 2348 aa6□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Gm11627A6PWP4 55 aa6□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Leap2Q91V13 76 aa5.98□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Romo1P60603 79 aa5.98□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 SonQ9QX47 2444 aaKnown RBP5.98□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Zfp292Q9Z2U2 2698 aa5.98□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Gm9195A0A140LHT4 2805 aa5.97□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Fam168bQ80XQ8 194 aa5.97□□□□□ -1.45
Hmgb1-201ENSMUST00000085546 Gm21798J3QNU5 87 aa5.96□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Snhg11Q4G0K9 87 aa5.96□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Ttc28Q80XJ3 2450 aa5.96□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Wfdc11A2A5H7 82 aa5.95□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Reg3bP35230 175 aa5.95□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Chd6A3KFM7 2711 aa5.95□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Ep300B2RWS6 2412 aa5.95□□□□□ -1.46
Hmgb1-201ENSMUST00000085546 Gm10139O88245 57 aa5.95□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms