RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Cd164Q9R0L9 197 aa6.62□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 A730009L09RikA0A1B0GS82 72 aa6.61□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 SnurfQ9WU12 71 aa6.61□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Fam19a3Q7TPG6 132 aa6.61□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Gm9903Q8C9Y8 129 aa6.61□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Tmem258P61166 79 aa6.6□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Spink8Q09TK9 105 aa6.59□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Gm37389A0A0A6YW05 95 aa6.59□□□□□ -1.35
Pcdh1-201ENSMUST00000057185 Igkv4-92A0A0B4J1I2 117 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Igkv8-21A0A140T8P7 120 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm17689B3GLJ4 109 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm11011D3Z3L9 86 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Mrpl55Q9CZ83 127 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 SvipQ3UZP4 77 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm17521F6QAC8 156 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 A830005F24RikQ8BRT5 167 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Fam19a5Q91WE9 132 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 4930519P11RikQ9CUJ8 166 aa6.58□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Pde6gP09174 87 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 P01819 144 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Cystm1Q8K353 104 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 LystP97412 3788 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 E130114P18RikF6S0S7 154 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm7138L7N2C3 230 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Csdc2Q91YQ3 154 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm3238W4VSP7 230 aa6.57□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Ighv2-9A0A075B5Q5 116 aa6.56□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Wfdc13Q5DQQ6 81 aa6.56□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Fam229bQ8CF36 80 aa6.56□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Ighv8-13A0A075B5Y0 101 aa6.56□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm10320E9PW43 113 aa6.56□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm17509Q9CZ61 145 aa6.56□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Trav14-1A0A0G2JF94 121 aa6.55□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 2310034G01RikA0A286YDL3 209 aa6.55□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Ntn5Q3UQ22 452 aa6.55□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm10401E9Q3K6 71 aa6.55□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Mrpl52Q9D0Y8 121 aa6.55□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 P06320 134 aa6.54□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Snhg11Q4G0K9 87 aa6.54□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 ApcQ61315 2845 aa6.54□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Tcl1b5P56845 121 aa6.54□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Sprr1bQ62267 153 aa6.53□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Ndufc1Q9CQY9 76 aa6.53□□□□□ -1.36
Pcdh1-201ENSMUST00000057185 Gm19935A0A1B0GSF9 52 aa6.52□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Vpreb1P13372 142 aa6.52□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Obox2E9PXV9 151 aa6.52□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Gm7137J3QMW1 236 aa6.52□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Gm16485Q8C4B7 115 aa6.52□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 AY074887Q8R5F9 132 aa6.51□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Gm10770F7D043 238 aa6.51□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Gm10308Q9CVR5 141 aa6.51□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 FcgbpE9Q0B5 2583 aa6.5□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Krtap16-1A2A5X5 502 aa6.49□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 E130208F15RikQ3UPV3 143 aa6.49□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Pkd1l1Q8R526 2615 aa6.49□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Srrm2Q8BTI8 2703 aaKnown RBP6.49□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 CubnQ9JLB4 3623 aa6.48□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Vpreb2P13373 142 aa6.48□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Smim29Q8R043 75 aa6.48□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Tenm1Q9WTS4 2731 aa6.47□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 6430550D23RikE9Q1X6 194 aa6.47□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Igkv8-28A0A0G2JE47 121 aa6.47□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Elof1P60003 83 aa6.47□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 B9d2Q3UK10 175 aa6.46□□□□□ -1.37
Pcdh1-201ENSMUST00000057185 Sprr2jO70561 109 aa6.46□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Fam168bQ80XQ8 194 aa6.46□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 A330070K13RikQ8CA53 115 aa6.46□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Ighv2-5A0A0A6YY69 116 aa6.45□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Pou2af1Q64693 256 aa6.45□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 CnbpP53996 178 aaKnown RBP6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Igkv1-110A0A0B4J1I0 119 aa6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Psors1c2Q80ZC9 134 aa6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Gm5617Q91VN2 117 aa6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Fbn1Q61554 2873 aaKnown RBP6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Xirp2Q4U4S6 3784 aa6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Cox6a2P43023 97 aa6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 C130032M10RikQ8C888 123 aa6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Gm44790A0A0N4SV91 103 aa6.44□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Sprr4Q8CGN8 76 aa6.43□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 BaalcQ8VHV1 145 aa6.43□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Gm10570F6VB42 170 aa6.43□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Znf414Q9DCK4 299 aa6.43□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 1700018G05RikA0A1B0GSI2 66 aa6.42□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Mrpl34Q99N91 92 aa6.42□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Serp1Q9Z1W5 66 aa6.42□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Stab2Q8R4U0 2559 aa6.41□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Wfdc17Q5SSJ1 76 aa6.41□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Defb38Q7TNV7 63 aa6.41□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Vpreb3D3Z6J4 130 aa6.41□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Ube2aQ9Z255 152 aa6.41□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Igkv3-12A0A140T8P0 119 aa6.41□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Rps28P62858 69 aaKnown RBP6.41□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 SmcpP15265 143 aa6.4□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 SycnQ8VCK7 134 aa6.4□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 1700012A03RikQ9DAF1 130 aa6.4□□□□□ -1.38
Pcdh1-201ENSMUST00000057185 Gm11213A0A1B0GR83 88 aa6.4□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Reg3aO09037 175 aa6.4□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 PscaP57096 123 aa6.4□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Gm36176A0A1W2P8D5 158 aa6.4□□□□□ -1.39
Pcdh1-201ENSMUST00000057185 Dph3Q8K0W9 82 aa6.4□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 140 ms