RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Gm10770F7D043 238 aa10.83□□□□□ -0.68
Ubr3-201ENSMUST00000055758 Gm10643Q3URG9 111 aa10.83□□□□□ -0.68
Ubr3-201ENSMUST00000055758 Uqcr11Q9CPX8 56 aa10.82□□□□□ -0.68
Ubr3-201ENSMUST00000055758 Gm17689B3GLJ4 109 aa10.81□□□□□ -0.68
Ubr3-201ENSMUST00000055758 Gpr15lA0A0B4J1N3 78 aa10.8□□□□□ -0.68
Ubr3-201ENSMUST00000055758 Elof1P60003 83 aa10.79□□□□□ -0.68
Ubr3-201ENSMUST00000055758 Chd8Q09XV5 2582 aaKnown RBP10.79□□□□□ -0.68
Ubr3-201ENSMUST00000055758 Cep192E9Q4Y4 2514 aaKnown RBP10.77□□□□□ -0.69
Ubr3-201ENSMUST00000055758 Ankrd17Q99NH0 2603 aaKnown RBP10.74□□□□□ -0.69
Ubr3-201ENSMUST00000055758 Gm10308Q9CVR5 141 aa10.74□□□□□ -0.69
Ubr3-201ENSMUST00000055758 Phf5aP83870 110 aaKnown RBP10.73□□□□□ -0.69
Ubr3-201ENSMUST00000055758 Gm11627A6PWP4 55 aa10.72□□□□□ -0.69
Ubr3-201ENSMUST00000055758 Gm9573F7C950 1606 aa10.71□□□□□ -0.7
Ubr3-201ENSMUST00000055758 Defb10Q8R2I8 73 aa10.7□□□□□ -0.7
Ubr3-201ENSMUST00000055758 Gm5617Q91VN2 117 aa10.7□□□□□ -0.7
Ubr3-201ENSMUST00000055758 Phxr4P15974 95 aa10.7□□□□□ -0.7
Ubr3-201ENSMUST00000055758 MobpQ9D2P8 170 aa10.7□□□□□ -0.7
Ubr3-201ENSMUST00000055758 Hectd1Q69ZR2 2618 aaKnown RBP10.68□□□□□ -0.7
Ubr3-201ENSMUST00000055758 Usp9yF8VPU6 2556 aa10.66□□□□□ -0.7
Ubr3-201ENSMUST00000055758 TrrapQ80YV3 2565 aaKnown RBP10.65□□□□□ -0.7
Ubr3-201ENSMUST00000055758 Q8BT88 171 aa10.65□□□□□ -0.71
Ubr3-201ENSMUST00000055758 Mki67E9PVX6 3177 aaKnown RBP10.63□□□□□ -0.71
Ubr3-201ENSMUST00000055758 E130208F15RikQ3UPV3 143 aa10.61□□□□□ -0.71
Ubr3-201ENSMUST00000055758 Snhg11Q4G0K9 87 aa10.61□□□□□ -0.71
Ubr3-201ENSMUST00000055758 Fam168bQ80XQ8 194 aa10.6□□□□□ -0.71
Ubr3-201ENSMUST00000055758 FasnP19096 2504 aaKnown RBP10.58□□□□□ -0.72
Ubr3-201ENSMUST00000055758 Gm16181B0V2H2 73 aa10.56□□□□□ -0.72
Ubr3-201ENSMUST00000055758 Gm3880A0A1B0GSB3 72 aa10.56□□□□□ -0.72
Ubr3-201ENSMUST00000055758 Spink7Q6IE32 76 aa10.56□□□□□ -0.72
Ubr3-201ENSMUST00000055758 Eif4ebp3Q80VV3 101 aa10.54□□□□□ -0.72
Ubr3-201ENSMUST00000055758 Notch1Q01705 2531 aa10.52□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Prrc2cQ3TLH4 2846 aaKnown RBP10.51□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Gm11213A0A1B0GR83 88 aa10.5□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Srsf12Q8C8K3 266 aa10.5□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Gm10772F7AIG4 85 aa10.49□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Bahcc1Q3UHR0 2643 aa10.49□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Gm21798J3QNU5 87 aa10.48□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Gm42715A0A087WP63 3095 aaKnown RBP10.48□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Gm10837Q3UTT8 145 aa10.48□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Dnah12Q3V0Q1 3086 aa10.47□□□□□ -0.73
Ubr3-201ENSMUST00000055758 Ankrd11E9Q4F7 2643 aa10.46□□□□□ -0.74
Ubr3-201ENSMUST00000055758 A330070K13RikQ8CA53 115 aa10.44□□□□□ -0.74
Ubr3-201ENSMUST00000055758 Krtap11-1E9Q2E9 183 aa10.43□□□□□ -0.74
Ubr3-201ENSMUST00000055758 Fn1P11276 2477 aaKnown RBP10.43□□□□□ -0.74
Ubr3-201ENSMUST00000055758 SetxA2AKX3 2646 aa10.4□□□□□ -0.74
Ubr3-201ENSMUST00000055758 Col4a2P08122 1707 aa10.39□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Defb11Q8R2I7 77 aa10.39□□□□□ -0.75
Ubr3-201ENSMUST00000055758 CicQ924A2 2510 aa10.38□□□□□ -0.75
Ubr3-201ENSMUST00000055758 1810062G17RikG3X8Y2 129 aa10.38□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Bod1lE9Q6J5 3032 aa10.38□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Ep400Q8CHI8 3072 aaKnown RBP10.37□□□□□ -0.75
Ubr3-201ENSMUST00000055758 2310034C09RikQ9D746 214 aa10.37□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Abca12E9Q876 2595 aa10.37□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Gm9955Q8CEJ8 102 aa10.36□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Chtf8P0CG14 533 aa10.36□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Fam229bQ8CF36 80 aa10.35□□□□□ -0.75
Ubr3-201ENSMUST00000055758 AY074887Q8R5F9 132 aa10.35□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Ranbp2Q9ERU9 3053 aaKnown RBP10.34□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Sprr4Q8CGN8 76 aa10.34□□□□□ -0.75
Ubr3-201ENSMUST00000055758 Krtap24-1G3X9A2 248 aa10.33□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Gm3285A0A1W2P7U0 201 aa10.33□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Myo18bE9PV66 2605 aa10.32□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Gm3250E9Q1M3 230 aa10.32□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Cypt15B1AXS0 87 aa10.3□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Psors1c2Q80ZC9 134 aa10.3□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Lama2Q60675 3118 aaKnown RBP10.3□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Gm7276Q3TYW4 209 aa10.29□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Anapc11Q9CPX9 84 aa10.28□□□□□ -0.76
Ubr3-201ENSMUST00000055758 Lypd5Q9D7Z7 256 aa10.27□□□□□ -0.76
Ubr3-201ENSMUST00000055758 CnbpP53996 178 aaKnown RBP10.26□□□□□ -0.77
Ubr3-201ENSMUST00000055758 BptfA2A654 3036 aaKnown RBP10.26□□□□□ -0.77
Ubr3-201ENSMUST00000055758 Nsd1O88491 2588 aaKnown RBP10.24□□□□□ -0.77
Ubr3-201ENSMUST00000055758 C530025M09RikF6RGA8 229 aa10.23□□□□□ -0.77
Ubr3-201ENSMUST00000055758 Gm9821Q8K076 103 aa10.23□□□□□ -0.77
Ubr3-201ENSMUST00000055758 Akap13E9Q394 2776 aa10.23□□□□□ -0.77
Ubr3-201ENSMUST00000055758 Krtap26-1Q9D7N2 215 aa10.22□□□□□ -0.77
Ubr3-201ENSMUST00000055758 Camk2n1Q6QWF9 78 aa10.21□□□□□ -0.78
Ubr3-201ENSMUST00000055758 Sprr1bQ62267 153 aa10.2□□□□□ -0.78
Ubr3-201ENSMUST00000055758 Unc79Q0KK59 2596 aa10.2□□□□□ -0.78
Ubr3-201ENSMUST00000055758 Gm26620Q9CY65 116 aa10.19□□□□□ -0.78
Ubr3-201ENSMUST00000055758 Cep350E9Q309 3095 aa10.19□□□□□ -0.78
Ubr3-201ENSMUST00000055758 Defb9Q8R2I6 67 aa10.19□□□□□ -0.78
Ubr3-201ENSMUST00000055758 Prune2Q52KR3 3084 aa10.15□□□□□ -0.78
Ubr3-201ENSMUST00000055758 Spata3Q9D9T6 193 aa10.14□□□□□ -0.79
Ubr3-201ENSMUST00000055758 Gm4491E0CX42 125 aa10.11□□□□□ -0.79
Ubr3-201ENSMUST00000055758 6030445D17RikE9Q8F9 148 aa10.1□□□□□ -0.79
Ubr3-201ENSMUST00000055758 Stab1Q8R4Y4 2571 aa10.1□□□□□ -0.79
Ubr3-201ENSMUST00000055758 Gm9195A0A140LHT4 2805 aa10.09□□□□□ -0.79
Ubr3-201ENSMUST00000055758 NipblQ6KCD5 2798 aaKnown RBP10.05□□□□□ -0.8
Ubr3-201ENSMUST00000055758 Zfp292Q9Z2U2 2698 aa10.05□□□□□ -0.8
Ubr3-201ENSMUST00000055758 Lama3Q61789 3330 aa10.02□□□□□ -0.81
Ubr3-201ENSMUST00000055758 CenpfE9Q3P4 2997 aaKnown RBP10.02□□□□□ -0.81
Ubr3-201ENSMUST00000055758 Plac8Q9JI48 112 aa10.01□□□□□ -0.81
Ubr3-201ENSMUST00000055758 Unc80Q8BLN6 3261 aa10.01□□□□□ -0.81
Ubr3-201ENSMUST00000055758 Smim29Q8R043 75 aa9.99□□□□□ -0.81
Ubr3-201ENSMUST00000055758 Gcn1E9PVA8 2671 aaKnown RBP9.98□□□□□ -0.81
Ubr3-201ENSMUST00000055758 TrioQ0KL02 3102 aa9.98□□□□□ -0.81
Ubr3-201ENSMUST00000055758 Ash1lQ99MY8 2958 aa9.97□□□□□ -0.81
Ubr3-201ENSMUST00000055758 Celsr3Q91ZI0 3301 aa9.97□□□□□ -0.81
Ubr3-201ENSMUST00000055758 Fam104aA2A6P4 185 aa9.96□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 61.2 ms