RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Gm10770F7D043 238 aa10,83□□□□□ -0,68
Ubr3-201ENSMUST00000055758 Gm10643Q3URG9 111 aa10,83□□□□□ -0,68
Ubr3-201ENSMUST00000055758 Uqcr11Q9CPX8 56 aa10,82□□□□□ -0,68
Ubr3-201ENSMUST00000055758 Gm17689B3GLJ4 109 aa10,81□□□□□ -0,68
Ubr3-201ENSMUST00000055758 Gpr15lA0A0B4J1N3 78 aa10,8□□□□□ -0,68
Ubr3-201ENSMUST00000055758 Elof1P60003 83 aa10,79□□□□□ -0,68
Ubr3-201ENSMUST00000055758 Chd8Q09XV5 2582 aaKnown RBP10,79□□□□□ -0,68
Ubr3-201ENSMUST00000055758 Cep192E9Q4Y4 2514 aaKnown RBP10,77□□□□□ -0,69
Ubr3-201ENSMUST00000055758 Ankrd17Q99NH0 2603 aaKnown RBP10,74□□□□□ -0,69
Ubr3-201ENSMUST00000055758 Gm10308Q9CVR5 141 aa10,74□□□□□ -0,69
Ubr3-201ENSMUST00000055758 Phf5aP83870 110 aaKnown RBP10,73□□□□□ -0,69
Ubr3-201ENSMUST00000055758 Gm11627A6PWP4 55 aa10,72□□□□□ -0,69
Ubr3-201ENSMUST00000055758 Gm9573F7C950 1606 aa10,71□□□□□ -0,7
Ubr3-201ENSMUST00000055758 Defb10Q8R2I8 73 aa10,7□□□□□ -0,7
Ubr3-201ENSMUST00000055758 Gm5617Q91VN2 117 aa10,7□□□□□ -0,7
Ubr3-201ENSMUST00000055758 Phxr4P15974 95 aa10,7□□□□□ -0,7
Ubr3-201ENSMUST00000055758 MobpQ9D2P8 170 aa10,7□□□□□ -0,7
Ubr3-201ENSMUST00000055758 Hectd1Q69ZR2 2618 aaKnown RBP10,68□□□□□ -0,7
Ubr3-201ENSMUST00000055758 Usp9yF8VPU6 2556 aa10,66□□□□□ -0,7
Ubr3-201ENSMUST00000055758 TrrapQ80YV3 2565 aaKnown RBP10,65□□□□□ -0,7
Ubr3-201ENSMUST00000055758 Q8BT88 171 aa10,65□□□□□ -0,71
Ubr3-201ENSMUST00000055758 Mki67E9PVX6 3177 aaKnown RBP10,63□□□□□ -0,71
Ubr3-201ENSMUST00000055758 E130208F15RikQ3UPV3 143 aa10,61□□□□□ -0,71
Ubr3-201ENSMUST00000055758 Snhg11Q4G0K9 87 aa10,61□□□□□ -0,71
Ubr3-201ENSMUST00000055758 Fam168bQ80XQ8 194 aa10,6□□□□□ -0,71
Ubr3-201ENSMUST00000055758 FasnP19096 2504 aaKnown RBP10,58□□□□□ -0,72
Ubr3-201ENSMUST00000055758 Gm16181B0V2H2 73 aa10,56□□□□□ -0,72
Ubr3-201ENSMUST00000055758 Gm3880A0A1B0GSB3 72 aa10,56□□□□□ -0,72
Ubr3-201ENSMUST00000055758 Spink7Q6IE32 76 aa10,56□□□□□ -0,72
Ubr3-201ENSMUST00000055758 Eif4ebp3Q80VV3 101 aa10,54□□□□□ -0,72
Ubr3-201ENSMUST00000055758 Notch1Q01705 2531 aa10,52□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Prrc2cQ3TLH4 2846 aaKnown RBP10,51□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Gm11213A0A1B0GR83 88 aa10,5□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Srsf12Q8C8K3 266 aa10,5□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Gm10772F7AIG4 85 aa10,49□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Bahcc1Q3UHR0 2643 aa10,49□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Gm21798J3QNU5 87 aa10,48□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Gm42715A0A087WP63 3095 aaKnown RBP10,48□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Gm10837Q3UTT8 145 aa10,48□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Dnah12Q3V0Q1 3086 aa10,47□□□□□ -0,73
Ubr3-201ENSMUST00000055758 Ankrd11E9Q4F7 2643 aa10,46□□□□□ -0,74
Ubr3-201ENSMUST00000055758 A330070K13RikQ8CA53 115 aa10,44□□□□□ -0,74
Ubr3-201ENSMUST00000055758 Krtap11-1E9Q2E9 183 aa10,43□□□□□ -0,74
Ubr3-201ENSMUST00000055758 Fn1P11276 2477 aaKnown RBP10,43□□□□□ -0,74
Ubr3-201ENSMUST00000055758 SetxA2AKX3 2646 aa10,4□□□□□ -0,74
Ubr3-201ENSMUST00000055758 Col4a2P08122 1707 aa10,39□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Defb11Q8R2I7 77 aa10,39□□□□□ -0,75
Ubr3-201ENSMUST00000055758 CicQ924A2 2510 aa10,38□□□□□ -0,75
Ubr3-201ENSMUST00000055758 1810062G17RikG3X8Y2 129 aa10,38□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Bod1lE9Q6J5 3032 aa10,38□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Ep400Q8CHI8 3072 aaKnown RBP10,37□□□□□ -0,75
Ubr3-201ENSMUST00000055758 2310034C09RikQ9D746 214 aa10,37□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Abca12E9Q876 2595 aa10,37□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Gm9955Q8CEJ8 102 aa10,36□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Chtf8P0CG14 533 aa10,36□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Fam229bQ8CF36 80 aa10,35□□□□□ -0,75
Ubr3-201ENSMUST00000055758 AY074887Q8R5F9 132 aa10,35□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Ranbp2Q9ERU9 3053 aaKnown RBP10,34□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Sprr4Q8CGN8 76 aa10,34□□□□□ -0,75
Ubr3-201ENSMUST00000055758 Krtap24-1G3X9A2 248 aa10,33□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Gm3285A0A1W2P7U0 201 aa10,33□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Myo18bE9PV66 2605 aa10,32□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Gm3250E9Q1M3 230 aa10,32□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Cypt15B1AXS0 87 aa10,3□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Psors1c2Q80ZC9 134 aa10,3□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Lama2Q60675 3118 aaKnown RBP10,3□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Gm7276Q3TYW4 209 aa10,29□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Anapc11Q9CPX9 84 aa10,28□□□□□ -0,76
Ubr3-201ENSMUST00000055758 Lypd5Q9D7Z7 256 aa10,27□□□□□ -0,76
Ubr3-201ENSMUST00000055758 CnbpP53996 178 aaKnown RBP10,26□□□□□ -0,77
Ubr3-201ENSMUST00000055758 BptfA2A654 3036 aaKnown RBP10,26□□□□□ -0,77
Ubr3-201ENSMUST00000055758 Nsd1O88491 2588 aaKnown RBP10,24□□□□□ -0,77
Ubr3-201ENSMUST00000055758 C530025M09RikF6RGA8 229 aa10,23□□□□□ -0,77
Ubr3-201ENSMUST00000055758 Gm9821Q8K076 103 aa10,23□□□□□ -0,77
Ubr3-201ENSMUST00000055758 Akap13E9Q394 2776 aa10,23□□□□□ -0,77
Ubr3-201ENSMUST00000055758 Krtap26-1Q9D7N2 215 aa10,22□□□□□ -0,77
Ubr3-201ENSMUST00000055758 Camk2n1Q6QWF9 78 aa10,21□□□□□ -0,78
Ubr3-201ENSMUST00000055758 Sprr1bQ62267 153 aa10,2□□□□□ -0,78
Ubr3-201ENSMUST00000055758 Unc79Q0KK59 2596 aa10,2□□□□□ -0,78
Ubr3-201ENSMUST00000055758 Gm26620Q9CY65 116 aa10,19□□□□□ -0,78
Ubr3-201ENSMUST00000055758 Cep350E9Q309 3095 aa10,19□□□□□ -0,78
Ubr3-201ENSMUST00000055758 Defb9Q8R2I6 67 aa10,19□□□□□ -0,78
Ubr3-201ENSMUST00000055758 Prune2Q52KR3 3084 aa10,15□□□□□ -0,78
Ubr3-201ENSMUST00000055758 Spata3Q9D9T6 193 aa10,14□□□□□ -0,79
Ubr3-201ENSMUST00000055758 Gm4491E0CX42 125 aa10,11□□□□□ -0,79
Ubr3-201ENSMUST00000055758 6030445D17RikE9Q8F9 148 aa10,1□□□□□ -0,79
Ubr3-201ENSMUST00000055758 Stab1Q8R4Y4 2571 aa10,1□□□□□ -0,79
Ubr3-201ENSMUST00000055758 Gm9195A0A140LHT4 2805 aa10,09□□□□□ -0,79
Ubr3-201ENSMUST00000055758 NipblQ6KCD5 2798 aaKnown RBP10,05□□□□□ -0,8
Ubr3-201ENSMUST00000055758 Zfp292Q9Z2U2 2698 aa10,05□□□□□ -0,8
Ubr3-201ENSMUST00000055758 Lama3Q61789 3330 aa10,02□□□□□ -0,81
Ubr3-201ENSMUST00000055758 CenpfE9Q3P4 2997 aaKnown RBP10,02□□□□□ -0,81
Ubr3-201ENSMUST00000055758 Plac8Q9JI48 112 aa10,01□□□□□ -0,81
Ubr3-201ENSMUST00000055758 Unc80Q8BLN6 3261 aa10,01□□□□□ -0,81
Ubr3-201ENSMUST00000055758 Smim29Q8R043 75 aa9,99□□□□□ -0,81
Ubr3-201ENSMUST00000055758 Gcn1E9PVA8 2671 aaKnown RBP9,98□□□□□ -0,81
Ubr3-201ENSMUST00000055758 TrioQ0KL02 3102 aa9,98□□□□□ -0,81
Ubr3-201ENSMUST00000055758 Ash1lQ99MY8 2958 aa9,97□□□□□ -0,81
Ubr3-201ENSMUST00000055758 Celsr3Q91ZI0 3301 aa9,97□□□□□ -0,81
Ubr3-201ENSMUST00000055758 Fam104aA2A6P4 185 aa9,96□□□□□ -0,82
Retrieved 100 of 22,080 RNA–protein pairs in 41,9 ms