RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Coa5Q99M07 74 aa6.07□□□□□ -1.44
Polr1a-201ENSMUST00000055296 HrnrQ8VHD8 2496 aa6.06□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Gm10770F7D043 238 aa6.05□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Piezo2Q8CD54 2822 aa6.05□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Elof1P60003 83 aa6.05□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Znf575Q3TXZ1 239 aa6.05□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Gm5464Q3UY29 175 aa6.04□□□□□ -1.44
Polr1a-201ENSMUST00000055296 FasnP19096 2504 aaKnown RBP6.04□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Uqcr11Q9CPX8 56 aa6.03□□□□□ -1.44
Polr1a-201ENSMUST00000055296 Gm9573F7C950 1606 aa6.02□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Q8BT88 171 aa6.02□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Usp24B1AY13 2617 aaKnown RBP6□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Ankrd17Q99NH0 2603 aaKnown RBP6□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Gm16181B0V2H2 73 aa5.99□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Eif4ebp3Q80VV3 101 aa5.99□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Gm10837Q3UTT8 145 aa5.98□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Fam168bQ80XQ8 194 aa5.98□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Q9DAB9 146 aa5.98□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Dmbt1Q60997 2085 aa5.98□□□□□ -1.45
Polr1a-201ENSMUST00000055296 E130208F15RikQ3UPV3 143 aa5.98□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Gm10308Q9CVR5 141 aa5.98□□□□□ -1.45
Polr1a-201ENSMUST00000055296 Gm3880A0A1B0GSB3 72 aa5.97□□□□□ -1.45
Polr1a-201ENSMUST00000055296 CicQ924A2 2510 aa5.96□□□□□ -1.46
Polr1a-201ENSMUST00000055296 Phxr4P15974 95 aa5.96□□□□□ -1.46
Polr1a-201ENSMUST00000055296 Snhg11Q4G0K9 87 aa5.96□□□□□ -1.46
Polr1a-201ENSMUST00000055296 AI854703Q8BIN3 203 aa5.94□□□□□ -1.46
Polr1a-201ENSMUST00000055296 Unc79Q0KK59 2596 aa5.93□□□□□ -1.46
Polr1a-201ENSMUST00000055296 Prr13Q9CQJ5 137 aa5.93□□□□□ -1.46
Polr1a-201ENSMUST00000055296 3110070M22RikQ9DAQ7 118 aa5.92□□□□□ -1.46
Polr1a-201ENSMUST00000055296 Gm9821Q8K076 103 aa5.91□□□□□ -1.46
Polr1a-201ENSMUST00000055296 1810062G17RikG3X8Y2 129 aa5.91□□□□□ -1.46
Polr1a-201ENSMUST00000055296 Psors1c2Q80ZC9 134 aa5.91□□□□□ -1.46
Polr1a-201ENSMUST00000055296 Gm21798J3QNU5 87 aa5.9□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Cypt15B1AXS0 87 aa5.89□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Prr9Q8BV84 116 aa5.89□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Camk2n1Q6QWF9 78 aa5.89□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Gm9955Q8CEJ8 102 aa5.88□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Cep192E9Q4Y4 2514 aaKnown RBP5.87□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Fn1P11276 2477 aaKnown RBP5.86□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Gm3285A0A1W2P7U0 201 aa5.85□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Chtf8P0CG14 533 aa5.85□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Akap13E9Q394 2776 aa5.85□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Gm26620Q9CY65 116 aa5.85□□□□□ -1.47
Polr1a-201ENSMUST00000055296 Anapc11Q9CPX9 84 aa5.84□□□□□ -1.47
Polr1a-201ENSMUST00000055296 SetxA2AKX3 2646 aa5.84□□□□□ -1.47
Polr1a-201ENSMUST00000055296 2310034C09RikQ9D746 214 aa5.83□□□□□ -1.48
Polr1a-201ENSMUST00000055296 Abca12E9Q876 2595 aa5.83□□□□□ -1.48
Polr1a-201ENSMUST00000055296 Spata3Q9D9T6 193 aa5.79□□□□□ -1.48
Polr1a-201ENSMUST00000055296 Krtap11-1E9Q2E9 183 aa5.78□□□□□ -1.48
Polr1a-201ENSMUST00000055296 Krtap24-1G3X9A2 248 aa5.77□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Bahcc1Q3UHR0 2643 aa5.77□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Notch1Q01705 2531 aa5.76□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Defb9Q8R2I6 67 aa5.76□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Gm7276Q3TYW4 209 aa5.76□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Lypd5Q9D7Z7 256 aa5.76□□□□□ -1.49
Polr1a-201ENSMUST00000055296 A330070K13RikQ8CA53 115 aa5.75□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Gm11213A0A1B0GR83 88 aa5.73□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Gm10772F7AIG4 85 aa5.73□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Sprr4Q8CGN8 76 aa5.72□□□□□ -1.49
Polr1a-201ENSMUST00000055296 Gm3250E9Q1M3 230 aa5.71□□□□□ -1.49
Polr1a-201ENSMUST00000055296 OxtP35454 125 aa5.71□□□□□ -1.5
Polr1a-201ENSMUST00000055296 Gm4491E0CX42 125 aa5.71□□□□□ -1.5
Polr1a-201ENSMUST00000055296 Nsd1O88491 2588 aaKnown RBP5.7□□□□□ -1.5
Polr1a-201ENSMUST00000055296 Plac8Q9JI48 112 aa5.7□□□□□ -1.5
Polr1a-201ENSMUST00000055296 AW011738F6S7Q2 159 aa5.7□□□□□ -1.5
Polr1a-201ENSMUST00000055296 6030445D17RikE9Q8F9 148 aa5.69□□□□□ -1.5
Polr1a-201ENSMUST00000055296 Gm42715A0A087WP63 3095 aaKnown RBP5.69□□□□□ -1.5
Polr1a-201ENSMUST00000055296 Prrc2cQ3TLH4 2846 aaKnown RBP5.68□□□□□ -1.5
Polr1a-201ENSMUST00000055296 AY074887Q8R5F9 132 aa5.67□□□□□ -1.5
Polr1a-201ENSMUST00000055296 Krtap15-1Q9QZU5 150 aa5.67□□□□□ -1.5
Polr1a-201ENSMUST00000055296 UtrnE9Q6R7 3430 aa5.67□□□□□ -1.5
Polr1a-201ENSMUST00000055296 Fam229aB2KGE5 128 aa5.66□□□□□ -1.5
Polr1a-201ENSMUST00000055296 SrcapA0A087WQ44 3271 aa5.65□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Krtap26-1Q9D7N2 215 aa5.65□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Gcn1E9PVA8 2671 aaKnown RBP5.64□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Sprr1bQ62267 153 aa5.63□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Hectd1Q69ZR2 2618 aaKnown RBP5.63□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Stab1Q8R4Y4 2571 aa5.62□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Dnah12Q3V0Q1 3086 aa5.62□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Map1aQ9QYR6 2776 aa5.61□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Golgb1E9PVZ8 3238 aa5.6□□□□□ -1.51
Polr1a-201ENSMUST00000055296 PcntP48725 2898 aa5.59□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Fam229bQ8CF36 80 aa5.59□□□□□ -1.51
Polr1a-201ENSMUST00000055296 FlnbQ80X90 2602 aaKnown RBP5.59□□□□□ -1.51
Polr1a-201ENSMUST00000055296 Cypt14J3QPF7 87 aa5.59□□□□□ -1.52
Polr1a-201ENSMUST00000055296 CnbpP53996 178 aaKnown RBP5.58□□□□□ -1.52
Polr1a-201ENSMUST00000055296 AtrQ9JKK8 2635 aa5.57□□□□□ -1.52
Polr1a-201ENSMUST00000055296 9530053A07RikE9PVG8 2581 aa5.56□□□□□ -1.52
Polr1a-201ENSMUST00000055296 Zfp292Q9Z2U2 2698 aa5.55□□□□□ -1.52
Polr1a-201ENSMUST00000055296 Romo1P60603 79 aa5.55□□□□□ -1.52
Polr1a-201ENSMUST00000055296 C530025M09RikF6RGA8 229 aa5.55□□□□□ -1.52
Polr1a-201ENSMUST00000055296 Mast4Q811L6 2618 aa5.55□□□□□ -1.52
Polr1a-201ENSMUST00000055296 Fam104aA2A6P4 185 aa5.55□□□□□ -1.52
Polr1a-201ENSMUST00000055296 FlnaQ8BTM8 2647 aaKnown RBP5.55□□□□□ -1.52
Polr1a-201ENSMUST00000055296 Zcchc13Q9D548 170 aa5.54□□□□□ -1.52
Polr1a-201ENSMUST00000055296 Gm19426M0QWC7 77 aa5.52□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Gm10382Q3V0T5 144 aa5.5□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Chd6A3KFM7 2711 aa5.5□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Odf3bQ5M8M2 238 aa5.5□□□□□ -1.53
Polr1a-201ENSMUST00000055296 Smim29Q8R043 75 aa5.49□□□□□ -1.53
Retrieved 100 of 22,080 RNA–protein pairs in 94.6 ms