RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Cd164Q9R0L9 197 aa6.55□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Gm11213A0A1B0GR83 88 aa6.55□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Rbm3O89086 153 aaKnown RBP6.55□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Tmem258P61166 79 aa6.55□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Cmc4Q61908 68 aa6.55□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Col6a5A6H584 2640 aa6.55□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Igkv1-122A0A140T8M9 119 aa6.54□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Gm10770F7D043 238 aa6.54□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 BikO70337 150 aa6.54□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Reg3bP35230 175 aa6.54□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Tcl1b5P56845 121 aa6.54□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Snhg11Q4G0K9 87 aa6.54□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Cox7b2Q9D2H1 82 aa6.54□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Ighv8-13A0A075B5Y0 101 aa6.53□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Klk9Q32M27 251 aa6.53□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Igkv1-110A0A0B4J1I0 119 aa6.53□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Igkv8-34A0A0G2JDU0 121 aa6.53□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 A730071L15RikQ8C4X0 137 aa6.53□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Gm17509Q9CZ61 145 aa6.53□□□□□ -1.36
Ccdc40-202ENSMUST00000053440 Cdk2ap2Q9CPY4 127 aa6.52□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Camk2n2Q78WH7 79 aa6.52□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 A830005F24RikQ8BRT5 167 aa6.52□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Smim29Q8R043 75 aa6.52□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Brk1Q91VR8 75 aa6.51□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 9430015G10RikA2ASP7 199 aa6.51□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Samd13D3YUG0 102 aa6.51□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Gm7138L7N2C3 230 aa6.51□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Gm3238W4VSP7 230 aa6.51□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Srrm2Q8BTI8 2703 aaKnown RBP6.5□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Ighv2-5A0A0A6YY69 116 aa6.5□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Igkv8-28A0A0G2JE47 121 aa6.5□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 E130114P18RikF6S0S7 154 aa6.5□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 SnurfQ9WU12 71 aa6.5□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Igkv4-92A0A0B4J1I2 117 aa6.5□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Gm19935A0A1B0GSF9 52 aa6.5□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 A0A286YE02 88 aa6.49□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Smlr1J3QMJ4 66 aa6.49□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Elof1P60003 83 aa6.49□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 BC048502Q80Y74 154 aa6.49□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Rps28P62858 69 aaKnown RBP6.48□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 A330070K13RikQ8CA53 115 aa6.47□□□□□ -1.37
Ccdc40-202ENSMUST00000053440 Trav14-1A0A0G2JF94 121 aa6.46□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Sfta2E9PXB6 77 aa6.46□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Defa27F2Z403 93 aa6.46□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Nsd1O88491 2588 aaKnown RBP6.46□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Pde6gP09174 87 aa6.46□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Sprr4Q8CGN8 76 aa6.46□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Fam19a5Q91WE9 132 aa6.45□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Igkv3-2A0A075B5P0 119 aa6.44□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Pou2af1Q64693 256 aa6.44□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Vpreb2P13373 142 aa6.44□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 VwfQ8CIZ8 2813 aa6.43□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 HrnrQ8VHD8 2496 aa6.43□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Gm11011D3Z3L9 86 aa6.43□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Ndufc1Q9CQY9 76 aa6.43□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Fn1P11276 2477 aaKnown RBP6.43□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Prr15lQ8JZM2 100 aa6.43□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Ighv2-2A0A075B5P8 116 aa6.42□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 P01821 116 aa6.42□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Fam168bQ80XQ8 194 aa6.41□□□□□ -1.38
Ccdc40-202ENSMUST00000053440 Gm7137J3QMW1 236 aa6.4□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 AplnQ9R0R4 77 aa6.4□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 P06320 134 aa6.39□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Phxr5P08399 672 aa6.39□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Defb40Q70KL2 73 aa6.39□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Sprr2jO70561 109 aa6.39□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Pet100P0DJE0 76 aa6.38□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm7276Q3TYW4 209 aa6.38□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm5617Q91VN2 117 aa6.38□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm16485Q8C4B7 115 aa6.38□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 C130032M10RikQ8C888 123 aa6.37□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Cox6a2P43023 97 aa6.37□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Spink8Q09TK9 105 aa6.37□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Sslp1Q3UN54 99 aa6.37□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Dnah10D3YYQ8 4591 aa6.36□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm37389A0A0A6YW05 95 aa6.36□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 6430550D23RikE9Q1X6 194 aa6.36□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Defa28D3Z1V9 94 aa6.36□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 TgO08710 2766 aa6.35□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 PscaP57096 123 aa6.35□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Dnah7bL7N1Y0 4068 aa6.35□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 P84750 121 aa6.35□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Serp1Q9Z1W5 66 aa6.35□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm44790A0A0N4SV91 103 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm36176A0A1W2P8D5 158 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Vpreb1P13372 142 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Kmt2aP55200 3966 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Q8BT88 171 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Csmd3Q80T79 3707 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm10570F6VB42 170 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Defb12Q8K4N3 78 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Mrpl34Q99N91 92 aa6.34□□□□□ -1.39
Ccdc40-202ENSMUST00000053440 Gm17521F6QAC8 156 aa6.33□□□□□ -1.4
Ccdc40-202ENSMUST00000053440 Dmac1Q9CQ00 111 aa6.33□□□□□ -1.4
Ccdc40-202ENSMUST00000053440 H2al1aQ5M8Q2 105 aa6.33□□□□□ -1.4
Ccdc40-202ENSMUST00000053440 Ube2bP63147 152 aa6.33□□□□□ -1.4
Ccdc40-202ENSMUST00000053440 Gm10401E9Q3K6 71 aa6.32□□□□□ -1.4
Ccdc40-202ENSMUST00000053440 Obox2E9PXV9 151 aa6.32□□□□□ -1.4
Ccdc40-202ENSMUST00000053440 A530084C06RikQ3UTW2 186 aa6.32□□□□□ -1.4
Ccdc40-202ENSMUST00000053440 Igkv3-12A0A140T8P0 119 aa6.31□□□□□ -1.4
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms