RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Igkv2-109A0A075B5K6 120 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm5941Q497P9 117 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Q9DAA7 145 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 1700010B08RikQ9DAI7 102 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Defb5Q9EPV9 64 aa3.38□□□□□ -1.87
Clk1-201ENSMUST00000034868 Abca1P41233 2261 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv1-110A0A0B4J1I0 119 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv6-23A0A140T8N5 115 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv8-21A0A140T8P7 120 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 P01643 108 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Cox6b1P56391 86 aaKnown RBP3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Elof1P60003 83 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Rpl39P62892 51 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Coa5Q99M07 74 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Fgf23Q9EPC2 251 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Zfand2aQ9JII7 171 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Zfp407G3UVV3 2246 aa3.37□□□□□ -1.87
Clk1-201ENSMUST00000034868 Prune2Q52KR3 3084 aa3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 Ndufb1P0DN34 57 aa3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 E130208F15RikQ3UPV3 143 aa3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm5105Q8C6Y9 112 aa3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 SptssbQ925E8 76 aa3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 4930524J08RikQ9CUJ5 163 aa3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 Ly6hQ9WUC3 139 aa3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 Nsd1O88491 2588 aaKnown RBP3.36□□□□□ -1.87
Clk1-201ENSMUST00000034868 Frem2Q6NVD0 3160 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 FrylF8VQ05 3007 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv4-92A0A0B4J1I2 117 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv3-5A0A140T8M6 119 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm10271F6WY25 52 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 S100a4P07091 101 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm9949Q8C9F4 104 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Sostdc1Q9CQN4 206 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Cox7b2Q9D2H1 82 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Nav3Q80TN7 2359 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Bod1lE9Q6J5 3032 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv4-74A0A0B4J1I3 119 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 4930546C10RikE9Q4Y3 121 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Lyz1P17897 148 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Defb46Q4QY34 57 aa3.35□□□□□ -1.87
Clk1-201ENSMUST00000034868 Flg2Q2VIS4 2362 aa3.34□□□□□ -1.87
Clk1-201ENSMUST00000034868 Igkv6-15A0A140T8M5 115 aa3.34□□□□□ -1.87
Clk1-201ENSMUST00000034868 Gm9925F6T2U3 160 aa3.34□□□□□ -1.87
Clk1-201ENSMUST00000034868 Ly6lH3BJG9 140 aa3.34□□□□□ -1.87
Clk1-201ENSMUST00000034868 Clpsl2Q3UW21 102 aa3.34□□□□□ -1.87
Clk1-201ENSMUST00000034868 Defb29Q8BGW9 78 aa3.34□□□□□ -1.87
Clk1-201ENSMUST00000034868 Mrpl33Q9CQP0 65 aa3.34□□□□□ -1.87
Clk1-201ENSMUST00000034868 Celsr1O35161 3034 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm36368A0A1D5RLK8 91 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm6040Q4QY32 63 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Spink2Q8BMY7 86 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Dnajc13D4AFX7 2248 aaKnown RBP3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Prrc2cQ3TLH4 2846 aaKnown RBP3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Akap6E9Q9K8 2307 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Ighv3-3A0A0A6YWL2 116 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm11562A0PK51 136 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Krtap1-3A2A588 173 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm10577Q3UDV9 132 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Higd2aQ9CQJ1 106 aa3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Dido1Q8C9B9 2256 aaKnown RBP3.33□□□□□ -1.88
Clk1-201ENSMUST00000034868 Igkv4-59A0A0B4J1I8 117 aa3.32□□□□□ -1.88
Clk1-201ENSMUST00000034868 Ryr1E9PZQ0 5035 aa3.32□□□□□ -1.88
Clk1-201ENSMUST00000034868 Dmbt1Q60997 2085 aa3.31□□□□□ -1.88
Clk1-201ENSMUST00000034868 Ighv1-59A0A0A6YXE0 117 aa3.31□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm10322F7D7I4 111 aa3.31□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm9747Q810H1 104 aa3.31□□□□□ -1.88
Clk1-201ENSMUST00000034868 4930470P17RikQ9D542 155 aa3.31□□□□□ -1.88
Clk1-201ENSMUST00000034868 Defb3Q9WTL0 63 aa3.31□□□□□ -1.88
Clk1-201ENSMUST00000034868 Ighv3-8A0A075B5T0 131 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 A0A286YCN5 57 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm17689B3GLJ4 109 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Plac8Q9JI48 112 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 NacaP70670 2187 aaKnown RBP3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Sptbn1Q62261 2363 aaKnown RBP3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Zfhx3Q61329 3726 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm20730A0A075B5J6 119 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Igkv4-57-1A0A075B5M4 119 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Igkv4-70A0A0B4J1I5 116 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Krtap4-8B1AQA8 209 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 9230109A22RikQ8BHE6 111 aa3.3□□□□□ -1.88
Clk1-201ENSMUST00000034868 Igkv4-53A0A0G2JFC6 119 aa3.29□□□□□ -1.88
Clk1-201ENSMUST00000034868 Gm16381A0A1Y7VKT9 73 aa3.29□□□□□ -1.88
Clk1-201ENSMUST00000034868 Sprr3O09116 238 aa3.29□□□□□ -1.88
Clk1-201ENSMUST00000034868 Defb26Q30KN7 186 aa3.29□□□□□ -1.88
Clk1-201ENSMUST00000034868 Fxyd3Q61835 88 aa3.29□□□□□ -1.88
Clk1-201ENSMUST00000034868 Camk2n2Q78WH7 79 aa3.28□□□□□ -1.88
Clk1-201ENSMUST00000034868 E130116L18RikQ8BMV6 101 aa3.28□□□□□ -1.88
Clk1-201ENSMUST00000034868 Nav2E9Q842 2432 aa3.28□□□□□ -1.88
Clk1-201ENSMUST00000034868 Pde6gP09174 87 aa3.28□□□□□ -1.89
Clk1-201ENSMUST00000034868 Gm27235Q3UW50 83 aa3.28□□□□□ -1.89
Clk1-201ENSMUST00000034868 Krtap12-1Q9Z287 130 aa3.28□□□□□ -1.89
Clk1-201ENSMUST00000034868 Gm17732E9Q5I2 61 aa3.27□□□□□ -1.89
Clk1-201ENSMUST00000034868 6030445D17RikE9Q8F9 148 aa3.27□□□□□ -1.89
Clk1-201ENSMUST00000034868 Gm21886J3QJU9 214 aa3.27□□□□□ -1.89
Clk1-201ENSMUST00000034868 Tex15F8VPN2 2785 aa3.27□□□□□ -1.89
Clk1-201ENSMUST00000034868 Qrich2A0A140LIY9 2337 aa3.27□□□□□ -1.89
Clk1-201ENSMUST00000034868 Trav9d-3A0A075B695 113 aa3.26□□□□□ -1.89
Clk1-201ENSMUST00000034868 Igkv4-57A0A0A6YYE7 117 aa3.26□□□□□ -1.89
Clk1-201ENSMUST00000034868 Igkv1-117A0A140T8M0 119 aa3.26□□□□□ -1.89
Clk1-201ENSMUST00000034868 1700011M02RikB1AX35 88 aa3.26□□□□□ -1.89
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms